BLASTX nr result

ID: Cnidium21_contig00022621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022621
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   223   1e-56
ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Popu...   223   1e-56
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   223   1e-56
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...   221   5e-56
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   219   2e-55

>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/165 (66%), Positives = 137/165 (83%), Gaps = 4/165 (2%)
 Frame = -1

Query: 485  KYTERKDRLDEV----KIDKMLQCLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPM 318
            K    + + DE+    K+D++L+ LD+  GVKAKF+LN+L LC+S+GEKLLVFSQYL P+
Sbjct: 679  KLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPL 738

Query: 317  KFLERLTVKVKGWSPGKEIFMITGDLDNDARELNMGHFNNSSDSRVFFGSIKACSEGISL 138
            +FLE+LT+KVKGWSPGKEIF I+G+  ++ RE +M  FN S D+RVFFGSIKAC EGISL
Sbjct: 739  RFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISL 798

Query: 137  VGASRIIVLDVHLNPSVTRQAIGRAFRPGQARKVYTYRLVAAGSP 3
            VGASR+++LDVHLNPSVTRQAIGRAFRPGQ +KV+ Y+LVAA SP
Sbjct: 799  VGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSP 843


>ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa]
           gi|222835795|gb|EEE74230.1| hypothetical protein
           POPTRDRAFT_592433 [Populus trichocarpa]
          Length = 387

 Score =  223 bits (568), Expect = 1e-56
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = -1

Query: 494 KLIKYTERKDRLDEVKIDKMLQCLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMK 315
           KL  ++E     D++ +D +L+ LD+  G KAKF+LN+L LC+S GEKLLVFSQYL P+K
Sbjct: 119 KLHSFSENSAVTDDM-MDNLLETLDVRDGAKAKFFLNILSLCKSAGEKLLVFSQYLTPLK 177

Query: 314 FLERLTVKVKGWSPGKEIFMITGDLDNDARELNMGHFNNSSDSRVFFGSIKACSEGISLV 135
           FLERL +KVKGW  GK+IF+I+G+  +D RE +M  FNNS D++VFFGSIKAC EGISLV
Sbjct: 178 FLERLVMKVKGWILGKDIFVISGESSSDHREWSMDRFNNSIDAKVFFGSIKACGEGISLV 237

Query: 134 GASRIIVLDVHLNPSVTRQAIGRAFRPGQARKVYTYRLVAAGSP 3
           GASRII+LDVHLNPSVTRQAIGRAFRPGQ +KVY YRLVAA SP
Sbjct: 238 GASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVYAYRLVAADSP 281


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  223 bits (568), Expect = 1e-56
 Identities = 109/165 (66%), Positives = 137/165 (83%), Gaps = 4/165 (2%)
 Frame = -1

Query: 485  KYTERKDRLDEV----KIDKMLQCLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPM 318
            K    + + DE+    K+D++L+ LD+  GVKAKF+LN+L LC+S+GEKLLVFSQYL P+
Sbjct: 905  KLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPL 964

Query: 317  KFLERLTVKVKGWSPGKEIFMITGDLDNDARELNMGHFNNSSDSRVFFGSIKACSEGISL 138
            +FLE+LT+KVKGWSPGKEIF I+G+  ++ RE +M  FN S D+RVFFGSIKAC EGISL
Sbjct: 965  RFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISL 1024

Query: 137  VGASRIIVLDVHLNPSVTRQAIGRAFRPGQARKVYTYRLVAAGSP 3
            VGASR+++LDVHLNPSVTRQAIGRAFRPGQ +KV+ Y+LVAA SP
Sbjct: 1025 VGASRVLILDVHLNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSP 1069


>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222848411|gb|EEE85958.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 630

 Score =  221 bits (563), Expect = 5e-56
 Identities = 111/164 (67%), Positives = 134/164 (81%)
 Frame = -1

Query: 494 KLIKYTERKDRLDEVKIDKMLQCLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMK 315
           KL  +++     D++ +D +L+ +D+  GVKAKF+LN+L LCES GEKLLVFSQYL P+K
Sbjct: 408 KLNSFSKNSAITDDM-MDDLLETVDVRDGVKAKFFLNILSLCESAGEKLLVFSQYLTPLK 466

Query: 314 FLERLTVKVKGWSPGKEIFMITGDLDNDARELNMGHFNNSSDSRVFFGSIKACSEGISLV 135
           FLERL +KVKGW  GKEIF+I+G+  +D RE +M  FNNS D++VFFGSIKAC EGISLV
Sbjct: 467 FLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFNNSMDAKVFFGSIKACGEGISLV 526

Query: 134 GASRIIVLDVHLNPSVTRQAIGRAFRPGQARKVYTYRLVAAGSP 3
           GASRII+LDVHLNPSVT QAIGRAFRPGQ +KVY YRLVAA SP
Sbjct: 527 GASRIIILDVHLNPSVTCQAIGRAFRPGQTKKVYAYRLVAADSP 570


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/149 (71%), Positives = 125/149 (83%)
 Frame = -1

Query: 449  KIDKMLQCLDINAGVKAKFYLNLLRLCESTGEKLLVFSQYLPPMKFLERLTVKVKGWSPG 270
            KID+++  +D+  GVK KF+LNLL LC +TGEKLLVFSQYL P+KF+ERL V+ KGWSPG
Sbjct: 695  KIDEVIDKMDVKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPG 754

Query: 269  KEIFMITGDLDNDARELNMGHFNNSSDSRVFFGSIKACSEGISLVGASRIIVLDVHLNPS 90
            +E FMI+G+   + RE +M  FNNS D+RVFFGSIKAC EGISLVGASRII+LDVHLNPS
Sbjct: 755  RETFMISGETTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPS 814

Query: 89   VTRQAIGRAFRPGQARKVYTYRLVAAGSP 3
            VTRQAIGRAFRPGQ +KV+ YRLVA  SP
Sbjct: 815  VTRQAIGRAFRPGQTKKVFAYRLVAGDSP 843


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