BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021956
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   412   e-113
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   304   2e-80
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   297   2e-78
ref|XP_004171978.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   296   4e-78
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   290   4e-76

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  412 bits (1060), Expect = e-113
 Identities = 199/313 (63%), Positives = 238/313 (76%), Gaps = 32/313 (10%)
 Frame = +2

Query: 5    FVREVVRLHGFPSSIVSDRDRVFLSNFWKEMFKLQGTELKRSTAYHPQTDGQTEIVNKTL 184
            FV+EVVRLHGFPSSIVSDRDR+FLS FWKE+F+L GT LKRS+AYHPQTDGQTEIVN+ L
Sbjct: 1291 FVKEVVRLHGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRAL 1350

Query: 185  ETYLRCFVGGQPKSWVKWLPWAEYAYNTAPHMSTKLTPFKVVYGKDPPSILRLGKGQTAV 364
            ETYLRCFVGG P+SW KWLPWAE++YNT+PH STK++PFKV+YG+DPP ++R  KGQT+V
Sbjct: 1351 ETYLRCFVGGHPRSWAKWLPWAEFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSV 1410

Query: 365  SSLEEMMQERDAILDD--------------------------------LRLQAYRQRSLA 448
             SLE M+Q+RDAI+DD                                LRLQ YRQRSLA
Sbjct: 1411 ESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLA 1470

Query: 449  RRPFEKLAAKFYGPFEIIQRVGAVAYKLQLPPSSKIHPVFHVSLLRRAVGAIPVSSSIPA 628
            +RPFEKLA +FYGPF ++QR+GA AYKLQLPPSSKIHPVFHVSLL++ VG  PV  +IP 
Sbjct: 1471 KRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPP 1530

Query: 629  QLSSEMELIVEPEQLLAVRRWGNTPPGRMEVLLKWKGLPEFEATWEDVAMMQSRFPSFHL 808
             +  +MEL+VEPE+LL VR+         E L+KWKGLP FEATWED++ +  RFPSFHL
Sbjct: 1531 HIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHL 1590

Query: 809  EDKVRLWGDGNVI 847
            EDKV +WG G V+
Sbjct: 1591 EDKVNVWGAGIVM 1603


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  304 bits (779), Expect = 2e-80
 Identities = 153/307 (49%), Positives = 206/307 (67%), Gaps = 32/307 (10%)
 Frame = +2

Query: 2    AFVREVVRLHGFPSSIVSDRDRVFLSNFWKEMFKLQGTELKRSTAYHPQTDGQTEIVNKT 181
            AF+R+VV+LHGFP+++VSDRDR+FLS FW E+FKLQGT L++STAYHPQTDGQTE+VN+ 
Sbjct: 1316 AFIRDVVKLHGFPNTLVSDRDRIFLSGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRC 1375

Query: 182  LETYLRCFVGGQPKSWVKWLPWAEYAYNTAPHMSTKLTPFKVVYGKDPPSILRLGKGQTA 361
            LE+YLRCF G +P SW +WLPWAEY YNT+ H +TK TPF+ VYG++PP +LR G   T 
Sbjct: 1376 LESYLRCFAGRRPTSWFQWLPWAEYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTN 1435

Query: 362  VSSLEEMMQERDAILDDLR--------------------------------LQAYRQRSL 445
             +++EE++++RD +L +LR                                L+ YRQ S+
Sbjct: 1436 NANVEELLKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSV 1495

Query: 446  ARRPFEKLAAKFYGPFEIIQRVGAVAYKLQLPPSSKIHPVFHVSLLRRAVGAIPVSSSIP 625
            A R  EKL+ +++GPF+++ R+G VAYKLQLP  S IHPVFHVS L+RAV        +P
Sbjct: 1496 AHRKNEKLSQRYFGPFKVLHRIGQVAYKLQLPEHSTIHPVFHVSQLKRAVPPSFTPQELP 1555

Query: 626  AQLSSEMELIVEPEQLLAVRRWGNTPPGRMEVLLKWKGLPEFEATWEDVAMMQSRFPSFH 805
              LS  +E    PE+LL +R+  NT  G  EVL++W GL   E+TWE +  +  ++P F 
Sbjct: 1556 KILSPTLEWNTGPEKLLDIRQ-SNTNSG-PEVLVQWSGLSTLESTWEPLLTLVQQYPDFD 1613

Query: 806  LEDKVRL 826
            LEDKV L
Sbjct: 1614 LEDKVSL 1620


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  297 bits (760), Expect = 2e-78
 Identities = 152/307 (49%), Positives = 197/307 (64%), Gaps = 33/307 (10%)
 Frame = +2

Query: 5    FVREVVRLHGFPSSIVSDRDRVFLSNFWKEMFKLQGTELKRSTAYHPQTDGQTEIVNKTL 184
            FV+E+VRLHGFP SIVSDRD+VF+S+FWK MFKL GT+L RSTAYHPQTDGQTE+VN+++
Sbjct: 2139 FVKEIVRLHGFPKSIVSDRDKVFVSSFWKGMFKLAGTKLNRSTAYHPQTDGQTEVVNRSV 2198

Query: 185  ETYLRCFVGGQPKSWVKWLPWAEYAYNTAPHMSTKLTPFKVVYGKDPPSILRLGKGQTAV 364
            ETYLRCF   +PK W KWL WAEY YNT  H S  +TPF+ VYG+ PP +L  G   T+ 
Sbjct: 2199 ETYLRCFCSEKPKEWAKWLHWAEYWYNTTFHRSLGITPFQAVYGRTPPPLLYYGDQSTSN 2258

Query: 365  SSLEEMMQERDAILDDLR--------------------------------LQAYRQRSLA 448
              L+E ++ RD +L+ L+                                ++ YRQ SL 
Sbjct: 2259 FLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVGDMVFLKIRPYRQSSLR 2318

Query: 449  RRPFEKLAAKFYGPFEIIQRVGAVAYKLQLPPSSKIHPVFHVSLLRRAVG-AIPVSSSIP 625
            ++  EKL+ KF+GPFE+ +R+G VAYKLQLP SS IHPVFHVS LR+ VG  I +     
Sbjct: 2319 KKKNEKLSPKFFGPFEVTERIGLVAYKLQLPESSCIHPVFHVSQLRKMVGNHIMLKPEEM 2378

Query: 626  AQLSSEMELIVEPEQLLAVRRWGNTPPGRMEVLLKWKGLPEFEATWEDVAMMQSRFPSFH 805
            A L+   E +  PE++     +     G  EVL+KW+GLP  +A+WE+    Q +FP+FH
Sbjct: 2379 ACLNENYEWLAIPEEIYG---YSKNKEGMWEVLIKWQGLPPQDASWEEYEEFQKKFPNFH 2435

Query: 806  LEDKVRL 826
            LEDKV L
Sbjct: 2436 LEDKVHL 2442


>ref|XP_004171978.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein
           phosphatase 4 regulatory subunit 3-like [Cucumis
           sativus]
          Length = 813

 Score =  296 bits (758), Expect = 4e-78
 Identities = 149/314 (47%), Positives = 203/314 (64%), Gaps = 32/314 (10%)
 Frame = +2

Query: 5   FVREVVRLHGFPSSIVSDRDRVFLSNFWKEMFKLQGTELKRSTAYHPQTDGQTEIVNKTL 184
           FV+EVVRLHGFP SIVSDRD++FLS+FWKE+F+L GT+L RSTAYHPQTDGQTE+VN+++
Sbjct: 6   FVKEVVRLHGFPQSIVSDRDKIFLSHFWKELFRLAGTKLNRSTAYHPQTDGQTEVVNRSV 65

Query: 185 ETYLRCFVGGQPKSWVKWLPWAEYAYNTAPHMSTKLTPFKVVYGKDPPSILRLGKGQTAV 364
           E YLRCF G +PK WVKWL WAEY YNT    S  +TPF+ VYG+ PP++L  G+ +T+ 
Sbjct: 66  EIYLRCFCGERPKEWVKWLSWAEYWYNTTFQKSLGVTPFQAVYGRTPPALLYYGERETSN 125

Query: 365 SSLEEMMQERDAILDD--------------------------------LRLQAYRQRSLA 448
           S+L+E ++ERD  L                                  L+++ YRQ SL 
Sbjct: 126 STLDEQLKERDVALGALKEHLRVAQDKMKSYADKKRRHVEFEEGDQVFLKIRPYRQVSLR 185

Query: 449 RRPFEKLAAKFYGPFEIIQRVGAVAYKLQLPPSSKIHPVFHVSLLRRAVGAIPVSSSIPA 628
           ++  EKL+ K++GP++I++R+G VAY+L+LP ++ IHPVFHVS L++A G    +  +  
Sbjct: 186 KKRNEKLSPKYFGPYKIVKRIGQVAYRLELPAAATIHPVFHVSQLKKAFGESTNNKELLP 245

Query: 629 QLSSEMELIVEPEQLLAVRRWGNTPPGRMEVLLKWKGLPEFEATWEDVAMMQSRFPSFHL 808
            L++  E    P++    R+      G  EVL+ W+GLP  EATWE     Q  FP FHL
Sbjct: 246 FLTANHEWKAVPQETNGYRK---NEAGGWEVLINWEGLPHHEATWEGYDDFQQSFPDFHL 302

Query: 809 EDKVRLWGDGNVIP 850
           EDKV+L  +G V P
Sbjct: 303 EDKVKLDREGTVRP 316


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  290 bits (741), Expect = 4e-76
 Identities = 145/287 (50%), Positives = 199/287 (69%), Gaps = 6/287 (2%)
 Frame = +2

Query: 5    FVREVVRLHGFPSSIVSDRDRVFLSNFWKEMFKLQGTELKRSTAYHPQTDGQTEIVNKTL 184
            F+REVVRLHG P SIVSDRD +F+SNFWKE+FKLQGT+LK S AYHP+TDGQTE+VN+ L
Sbjct: 983  FIREVVRLHGIPLSIVSDRDPIFMSNFWKELFKLQGTKLKMSIAYHPETDGQTEVVNRCL 1042

Query: 185  ETYLRCFVGGQPKSWVKWLPWAEYAYNTAPHMSTKLTPFKVVYGKDPPSILRLGKGQTAV 364
            ETYLRCF+  QPK+W  W+PWAEY +NT+ H +T  TPF++VYG+ PP I R  +G+T V
Sbjct: 1043 ETYLRCFIADQPKNWASWIPWAEYWFNTSYHAATGHTPFEMVYGRPPPVITRWVQGETRV 1102

Query: 365  SSLEEMMQERDAILDDLRLQAYR------QRSLARRPFEKLAAKFYGPFEIIQRVGAVAY 526
             +++  + +RD  L  LR Q  R      Q +  +R   KLAA+++ P+ +  RVGAVAY
Sbjct: 1103 EAVQRELLDRDEALKQLREQLLRAQVRMKQIADKKRIHAKLAARYHRPYPVEARVGAVAY 1162

Query: 527  KLQLPPSSKIHPVFHVSLLRRAVGAIPVSSSIPAQLSSEMELIVEPEQLLAVRRWGNTPP 706
            KL+LP  S++H VFHVSLL++AVG      ++P  L  +  +++EPE +L  R       
Sbjct: 1163 KLKLPEGSRVHSVFHVSLLKKAVGNYHEEENLP-DLEEDKGVVIEPETVLTRRTIQVQGE 1221

Query: 707  GRMEVLLKWKGLPEFEATWEDVAMMQSRFPSFHLEDKVRLWGDGNVI 847
               +VL+ W G    EATWED  +++S+FP+F+LEDK  L G G+++
Sbjct: 1222 KIDQVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKAMLSG-GSIV 1267