BLASTX nr result

ID: Cnidium21_contig00021951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021951
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263...   297   4e-78
ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|2...   281   3e-73
ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuc...   273   7e-71
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   273   7e-71
ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783...   260   5e-67

>ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
           gi|297743102|emb|CBI35969.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  297 bits (760), Expect = 4e-78
 Identities = 158/255 (61%), Positives = 180/255 (70%), Gaps = 5/255 (1%)
 Frame = -3

Query: 973 NNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRSAIAVL 794
           + INTLF+SGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H++A+A L
Sbjct: 18  SGINTLFVSGLPDDVKPREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQTAVAAL 77

Query: 793 HTLNGVKFDPETGHVLHIELAXXXXXXXXXXXG-PYVVIDKRKXXXXXXXXXXXXXXXXX 617
           H LNGVKFDP+TG +LHIELA              YVVIDKR                  
Sbjct: 78  HALNGVKFDPQTGSILHIELARSNSRRKRVPGSGAYVVIDKRSKTSTNAHETSSDDGDSE 137

Query: 616 XDLPTGPGNPESSDKDDVEIQKSGETEPNVGAT---ENEQTEKNAD-GLQPCSTLFIANL 449
            D P    NP+S + DD+   KSGE   +  +T    NEQ EK  D GL PCSTLFIANL
Sbjct: 138 SDEPAKTSNPDSGNNDDLVTAKSGEMAVDPDSTLTAVNEQPEKTTDAGLPPCSTLFIANL 197

Query: 448 GPTCNSDELKQVLSRFPGFNSLKVRDRGGMPVAFADFEELEQANVVMDALKDTTLPSSDR 269
           GPTC  DELKQVLS++PGFN LK+R +GGMPVAFADFEE+EQAN  MDAL+ + L SSDR
Sbjct: 198 GPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFEEIEQANKAMDALQGSMLASSDR 257

Query: 268 GGMHIEYARSKMRKP 224
           GGMH+EYARSKMRKP
Sbjct: 258 GGMHLEYARSKMRKP 272


>ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|222836088|gb|EEE74509.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  281 bits (718), Expect = 3e-73
 Identities = 151/255 (59%), Positives = 180/255 (70%), Gaps = 4/255 (1%)
 Frame = -3

Query: 976 NNNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRSAIAV 797
           N+ INTLF+SGLPDDV  REIHN+FR RPGF+SCQLKYTGR NQVVAFATF +H+SAIA 
Sbjct: 27  NSGINTLFVSGLPDDVKAREIHNIFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQSAIAA 86

Query: 796 LHTLNGVKFDPETGHVLHIELAXXXXXXXXXXXG-PYVVIDKRKXXXXXXXXXXXXXXXX 620
           LH+LNGVKFDP++G  LHIELA              YVVIDKR                 
Sbjct: 87  LHSLNGVKFDPQSGSTLHIELARSNSRRKRKPGSGAYVVIDKRTKKPSDAHETSSDDVES 146

Query: 619 XXDLPTGPGNPESSDKDDVEIQKS-GETEP-NVGATENEQTEKNADG-LQPCSTLFIANL 449
             +      N +++ + D E  KS   ++P N     NE  E+ A+G ++PCSTLFIANL
Sbjct: 147 DPEEDPEMNNVDTAYQGDSENAKSEAASDPDNAAVAVNEIGERTAEGGVRPCSTLFIANL 206

Query: 448 GPTCNSDELKQVLSRFPGFNSLKVRDRGGMPVAFADFEELEQANVVMDALKDTTLPSSDR 269
           GP C  DELKQVLS++PGF+ LK+R +GGMPVAFADFEE+EQA  VM+ L++TTLPSSDR
Sbjct: 207 GPNCTEDELKQVLSQYPGFHVLKIRAKGGMPVAFADFEEIEQATKVMENLQETTLPSSDR 266

Query: 268 GGMHIEYARSKMRKP 224
           GGMHIEYARSKMRKP
Sbjct: 267 GGMHIEYARSKMRKP 281


>ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
           B''-like [Cucumis sativus]
          Length = 262

 Score =  273 bits (697), Expect = 7e-71
 Identities = 149/255 (58%), Positives = 173/255 (67%), Gaps = 1/255 (0%)
 Frame = -3

Query: 988 TNTGNNNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRS 809
           T +  +NINTLFISGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H+S
Sbjct: 18  TYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQS 77

Query: 808 AIAVLHTLNGVKFDPETGHVLHIELA-XXXXXXXXXXXGPYVVIDKRKXXXXXXXXXXXX 632
           A+  LH LNGVKFDP++G VLHIELA            G YVVIDKRK            
Sbjct: 78  AVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKPXANSQETSS- 136

Query: 631 XXXXXXDLPTGPGNPESSDKDDVEIQKSGETEPNVGATENEQTEKNADGLQPCSTLFIAN 452
                     G   P+   K   +  ++  T  N  +   E  EKN  G  PCSTLFIAN
Sbjct: 137 --------DDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGG--PCSTLFIAN 186

Query: 451 LGPTCNSDELKQVLSRFPGFNSLKVRDRGGMPVAFADFEELEQANVVMDALKDTTLPSSD 272
           LGP CN DELK+VL ++PGFN LK+R + GMPVAFADFE++EQA+ VM+ L+ + LPSSD
Sbjct: 187 LGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSD 246

Query: 271 RGGMHIEYARSKMRK 227
           RGGMHIEYARSKMRK
Sbjct: 247 RGGMHIEYARSKMRK 261


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
           sativus]
          Length = 262

 Score =  273 bits (697), Expect = 7e-71
 Identities = 148/255 (58%), Positives = 172/255 (67%), Gaps = 1/255 (0%)
 Frame = -3

Query: 988 TNTGNNNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRS 809
           T +  +NINTLFISGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H+S
Sbjct: 18  TYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQS 77

Query: 808 AIAVLHTLNGVKFDPETGHVLHIELA-XXXXXXXXXXXGPYVVIDKRKXXXXXXXXXXXX 632
           A+  LH LNGVKFDP++G VLHIELA            G YVVIDKRK            
Sbjct: 78  AVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSS- 136

Query: 631 XXXXXXDLPTGPGNPESSDKDDVEIQKSGETEPNVGATENEQTEKNADGLQPCSTLFIAN 452
                     G   P+   K   +  ++  T  N  +   E  EKN  G  PCSTLFIAN
Sbjct: 137 --------DDGGSEPDEPSKKAQQSNEAVVTPANAISAPYEHHEKNDGG--PCSTLFIAN 186

Query: 451 LGPTCNSDELKQVLSRFPGFNSLKVRDRGGMPVAFADFEELEQANVVMDALKDTTLPSSD 272
           LGP CN DELK+VL ++PGFN LK+R + GMPVAFADFE++EQA+ VM+ L+ + LPSSD
Sbjct: 187 LGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSD 246

Query: 271 RGGMHIEYARSKMRK 227
           RGGMHIEYARSKMRK
Sbjct: 247 RGGMHIEYARSKMRK 261


>ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
          Length = 264

 Score =  260 bits (664), Expect = 5e-67
 Identities = 146/252 (57%), Positives = 167/252 (66%), Gaps = 3/252 (1%)
 Frame = -3

Query: 973 NNINTLFISGLPDDVSVREIHNLFRHRPGFESCQLKYTGRRNQVVAFATFNDHRSAIAVL 794
           +NINTLF+SGLPDDV  REIHNLFR RPGF+SCQLKYTGR NQVVAFATF +H+SA+A L
Sbjct: 18  SNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAAL 77

Query: 793 HTLNGVKFDPETGHVLHIELA-XXXXXXXXXXXGPYVVIDKRKXXXXXXXXXXXXXXXXX 617
           H LNGVKFDP+TG VLHIELA            G YVVIDKR                  
Sbjct: 78  HALNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDKRSKGEPDLQGSSSEDGDSD 137

Query: 616 XDLPTGPGNPESSDKDDVEIQKSGETEPNVGATENEQTEKNADGLQP--CSTLFIANLGP 443
            D P+  G+    ++ D+ I  S ET   VG+      E++  G     CSTLFIANLGP
Sbjct: 138 PDEPSDSGD----NQGDLAIMTSDETA--VGSDNAVSVEQHGKGSTGGLCSTLFIANLGP 191

Query: 442 TCNSDELKQVLSRFPGFNSLKVRDRGGMPVAFADFEELEQANVVMDALKDTTLPSSDRGG 263
            C  DELKQ  S + GFN +K+R RGGMPVAF DFEE  QA  VM+ L+ + LPSSDRGG
Sbjct: 192 NCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEETHQAAKVMEELQGSLLPSSDRGG 251

Query: 262 MHIEYARSKMRK 227
           MHIEYARSKMRK
Sbjct: 252 MHIEYARSKMRK 263


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