BLASTX nr result

ID: Cnidium21_contig00019070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00019070
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...   112   3e-23
gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japoni...   109   2e-22
gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]        109   2e-22
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...   108   4e-22
gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza...   108   4e-22

>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
            vulgaris subsp. vulgaris]
          Length = 2037

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1    CKARMWNAEHNNKYVKRQEPTFSICCRDNQVQLPEDRPPPPFLADLLS*GE-KTEDFMKN 177
            C A  W  E   K+ K  +PTFS CC + +VQLP  + PP  L  LLS G+ K+  F++N
Sbjct: 760  CGALFWYEERIGKHRKSPKPTFSNCCMNGKVQLPHFKDPPALLQRLLSNGDSKSRHFLEN 819

Query: 178  IRTYNSMFAFTSMGGKIDHKINNGKGPWWFKLNEQNYHLLGSLKP 312
            IR +NSMFAFTSMGGK+D  IN  +GP+ F+L+ QNYH +GSL P
Sbjct: 820  IRAFNSMFAFTSMGGKVDSSINECRGPYVFRLHGQNYHRIGSLLP 864


>gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japonica Group]
          Length = 1501

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/105 (49%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   CKARMWNAEHNNKYVKRQEPTFSICCRDNQVQLPEDRPPPPFLADLLS*-GEKTEDFMKN 177
           C A MW+AE +     +Q P+F +CC+  +V LP  +  PP+L  LL+  G ++ ++ +N
Sbjct: 166 CHALMWHAERSLHSTVKQ-PSFGLCCKQGKVALPPLKEQPPYLTSLLTRDGGRSTNYQQN 224

Query: 178 IRTYNSMFAFTSMGGKIDHKINNGKGPWWFKLNEQNYHLLGSLKP 312
           IR+YNSMFAFTSMGG +D KINNG GP+ F+LN QN+H +G+L P
Sbjct: 225 IRSYNSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTLLP 269


>gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]
          Length = 1517

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/105 (49%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = +1

Query: 1   CKARMWNAEHNNKYVKRQEPTFSICCRDNQVQLPEDRPPPPFLADLLS*-GEKTEDFMKN 177
           C A MW+AE +     +Q P+F +CC+  +V LP  +  PP+L  LL+  G ++ ++ +N
Sbjct: 166 CHALMWHAERSLHSTVKQ-PSFGLCCKQGKVALPPLKEQPPYLTSLLTRDGGRSTNYQQN 224

Query: 178 IRTYNSMFAFTSMGGKIDHKINNGKGPWWFKLNEQNYHLLGSLKP 312
           IR+YNSMFAFTSMGG +D KINNG GP+ F+LN QN+H +G+L P
Sbjct: 225 IRSYNSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTLLP 269


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 1682

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   CKARMWNAEHNNKYVKRQEPTFSICCRDNQVQLPEDRPPPPFLADLL--S*GEKTEDFMK 174
           C A  W  E      K   P+FS+CC+  +V LP  + PP +L++L+    G+++ ++M 
Sbjct: 295 CGALFWYEERTRGKGKGP-PSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMD 353

Query: 175 NIRTYNSMFAFTSMGGKIDHKINNGKGPWWFKLNEQNYHLLGSLKP 312
           NIR YNSMFAFTSMGGK+D +INNG GP+ F++N QNYH +G+L P
Sbjct: 354 NIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLP 399


>gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 1618

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   CKARMWNAEHNNKYVKRQEPTFSICCRDNQVQLPEDRPPPPFLADLL--S*GEKTEDFMK 174
           C A  W  E      K   P+FS+CC+  +V LP  + PP +L++L+    G+++ ++M 
Sbjct: 295 CGALFWYEERTRGKGKGP-PSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMD 353

Query: 175 NIRTYNSMFAFTSMGGKIDHKINNGKGPWWFKLNEQNYHLLGSLKP 312
           NIR YNSMFAFTSMGGK+D +INNG GP+ F++N QNYH +G+L P
Sbjct: 354 NIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLP 399


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