BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014414
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26820.3| unnamed protein product [Vitis vinifera]              204   6e-51
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   204   6e-51
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   204   6e-51
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   186   2e-45
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      184   6e-45

>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  204 bits (519), Expect = 6e-51
 Identities = 95/130 (73%), Positives = 110/130 (84%)
 Frame = +2

Query: 5    YDSQLGNLMDYYGIKTEAEILSCNIMKMSKSFDRRKDAEAISLAVKSLRKDARTWFNKNH 184
            YD +LGNLMDYYGIKTE+EILS +IM+MSKSFDRRKDAEAI LAVKSLRK+ARTWFNK  
Sbjct: 781  YDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG 840

Query: 185  GTSDGGINSLYAKASAWYHVTYHPDYWGVYNEGLDRPHFLSFPWCVYDKLIHIKKEQMSK 364
              +D   + +YAKASAWYHVTYHPDYWG YNEG+DR HFLSFPWCVYDKLIH K+++MS 
Sbjct: 841  SETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSG 900

Query: 365  TANVTAMLQR 394
             +   + L+R
Sbjct: 901  RSLHLSSLER 910


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  204 bits (519), Expect = 6e-51
 Identities = 95/130 (73%), Positives = 110/130 (84%)
 Frame = +2

Query: 5    YDSQLGNLMDYYGIKTEAEILSCNIMKMSKSFDRRKDAEAISLAVKSLRKDARTWFNKNH 184
            YD +LGNLMDYYGIKTE+EILS +IM+MSKSFDRRKDAEAI LAVKSLRK+ARTWFNK  
Sbjct: 983  YDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG 1042

Query: 185  GTSDGGINSLYAKASAWYHVTYHPDYWGVYNEGLDRPHFLSFPWCVYDKLIHIKKEQMSK 364
              +D   + +YAKASAWYHVTYHPDYWG YNEG+DR HFLSFPWCVYDKLIH K+++MS 
Sbjct: 1043 SETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSG 1102

Query: 365  TANVTAMLQR 394
             +   + L+R
Sbjct: 1103 RSLHLSSLER 1112


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  204 bits (519), Expect = 6e-51
 Identities = 95/130 (73%), Positives = 110/130 (84%)
 Frame = +2

Query: 5   YDSQLGNLMDYYGIKTEAEILSCNIMKMSKSFDRRKDAEAISLAVKSLRKDARTWFNKNH 184
           YD +LGNLMDYYGIKTE+EILS +IM+MSKSFDRRKDAEAI LAVKSLRK+ARTWFNK  
Sbjct: 516 YDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG 575

Query: 185 GTSDGGINSLYAKASAWYHVTYHPDYWGVYNEGLDRPHFLSFPWCVYDKLIHIKKEQMSK 364
             +D   + +YAKASAWYHVTYHPDYWG YNEG+DR HFLSFPWCVYDKLIH K+++MS 
Sbjct: 576 SETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSG 635

Query: 365 TANVTAMLQR 394
            +   + L+R
Sbjct: 636 RSLHLSSLER 645


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1125

 Score =  186 bits (471), Expect = 2e-45
 Identities = 85/120 (70%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
 Frame = +2

Query: 5    YDSQLGNLMDYYGIKTEAEILSCNIMKMSKSFDRRKDAEAISLAVKSLRKDARTWFNKN- 181
            YD +LGNLMDYYGIKTEAEIL  NIMKMSKSF++R+DAEAI++AV+SLRK+AR WFN+N 
Sbjct: 990  YDYKLGNLMDYYGIKTEAEILGGNIMKMSKSFNKRRDAEAINMAVRSLRKEARAWFNENS 1049

Query: 182  HGTSDGGINSLYAKASAWYHVTYHPDYWGVYNEGLDRPHFLSFPWCVYDKLIHIKKEQMS 361
             G  D G + +YAKASAWYHVTYHP YWG YNEG++R H+LSF WCVY  L+ IKKE++S
Sbjct: 1050 SGDVDSGSSDVYAKASAWYHVTYHPSYWGCYNEGMNRDHYLSFSWCVYPLLVQIKKEKLS 1109


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  184 bits (467), Expect = 6e-45
 Identities = 85/133 (63%), Positives = 108/133 (81%), Gaps = 2/133 (1%)
 Frame = +2

Query: 5    YDSQLGNLMDYYGIKTEAEILSCNIMKMSKSFDRRKDAEAISLAVKSLRKDARTWFNKNH 184
            YD +LGNLMDYYG+KTEAEIL   IMKMS+SF +++DAEAIS+AV+SLRK+AR+WFN+  
Sbjct: 971  YDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKG 1030

Query: 185  GTSDGGINSLYAKASAWYHVTYHPDYWGVYNEGLDRPHFLSFPWCVYDKLIHIKKEQ--M 358
               D  I+  YAKASAWY+VTYHP YWG YNEG++R HFLSFPWCVYDKLI IKKE+  +
Sbjct: 1031 SELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAV 1090

Query: 359  SKTANVTAMLQRF 397
             +  +++++  RF
Sbjct: 1091 REALDLSSLEHRF 1103