BLASTX nr result

ID: Cnidium21_contig00008033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00008033
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43141.1| cyclin D2 [Daucus carota]                             417   e-114
ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223...   319   7e-85
emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]               306   4e-81
ref|XP_004143552.1| PREDICTED: cyclin-D2-1-like [Cucumis sativus...   290   3e-76
ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423...   289   8e-76

>emb|CAD43141.1| cyclin D2 [Daucus carota]
          Length = 382

 Score =  417 bits (1073), Expect = e-114
 Identities = 223/285 (78%), Positives = 237/285 (83%), Gaps = 5/285 (1%)
 Frame = -1

Query: 952 LYKAHAHYKFGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVNVPL 773
           +YKAHAHY FGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVNVPL
Sbjct: 102 IYKAHAHYNFGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVNVPL 161

Query: 772 AVDFQVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKMNNIDTLPSGSL 593
            VD QVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRK+NN D LPSGSL
Sbjct: 162 TVDLQVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKINNADALPSGSL 221

Query: 592 INRSIQFILRTMKGIDFLEFRPSEISAAVAICVTKEIQTVDINKAMAGVKHVEKDRVMKC 413
           I+RSIQFIL+TMKGIDFLEFRPSEISAAVAICVT+E QT+DINKAM+ +  VEKDRV KC
Sbjct: 222 IDRSIQFILKTMKGIDFLEFRPSEISAAVAICVTREAQTLDINKAMSNIIPVEKDRVFKC 281

Query: 412 IEMIQDLTLITETSNGRTIVATTQVPQSPNGVLDAAACLSYKSDERTVVGSCPNSS---H 242
           IEMIQDLTL+TETSN  +     QVPQSP GVLD AACLSYKSDERT VGSCPNSS    
Sbjct: 282 IEMIQDLTLVTETSNVASGRTRAQVPQSPVGVLD-AACLSYKSDERT-VGSCPNSSLHTE 339

Query: 241 TSPDTKRRRFD*SFQQDSQGHEMWILLYHS--SFIFLVEWEFWCG 113
           TSP TKRR+            E+    ++S   F    EWEFWCG
Sbjct: 340 TSPHTKRRKL----------IEIMKCGFYSITQFQIFSEWEFWCG 374


>ref|XP_002530701.1| cyclin d, putative [Ricinus communis] gi|223529757|gb|EEF31696.1|
           cyclin d, putative [Ricinus communis]
          Length = 366

 Score =  319 bits (817), Expect = 7e-85
 Identities = 169/255 (66%), Positives = 206/255 (80%), Gaps = 6/255 (2%)
 Frame = -1

Query: 961 VEALYKAHAHYKFGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVN 782
           ++ ++K  AHY F ALSVCL++NYLDRFLS+Y+LP GK WT+QLLAVACLSLAAKMEE N
Sbjct: 102 IDWIWKVQAHYSFSALSVCLSMNYLDRFLSVYQLPKGKAWTMQLLAVACLSLAAKMEETN 161

Query: 781 VPLAVDFQVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKMNNIDTLPS 602
           VPL+VD QV +PKFVFEAKTI+RMELLVLSTLKWRMQ+ TPCSFIDY+L K+     L S
Sbjct: 162 VPLSVDLQVGEPKFVFEAKTIQRMELLVLSTLKWRMQSLTPCSFIDYYLAKIRGNQHL-S 220

Query: 601 GSLINRSIQFILRTMKGIDFLEFRPSEISAAVAICVTKEIQTVDINKAMAGVKHVEKDRV 422
            SL+ RS+Q IL  +K IDFLEFRPSEI+AAVAI V  E+Q VD+ KAM    HVE++RV
Sbjct: 221 TSLVTRSLQLILSIIKCIDFLEFRPSEIAAAVAIFVLGEVQAVDVYKAMPCFTHVEEERV 280

Query: 421 MKCIEMIQDLTLIT---ETSNGRTI--VATTQVPQSPNGVLDAAACLSYKSDERTVVGSC 257
           +KC+E+I+DL+LI+    TS+G  +   + + VPQSPNGVL+ AACLSYKSD+ T VGSC
Sbjct: 281 LKCVELIKDLSLISGSATTSSGDNVANASASSVPQSPNGVLE-AACLSYKSDD-TTVGSC 338

Query: 256 PNSSHT-SPDTKRRR 215
            NSSHT +PDTKRR+
Sbjct: 339 ANSSHTNTPDTKRRK 353


>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
          Length = 354

 Score =  306 bits (785), Expect = 4e-81
 Identities = 165/249 (66%), Positives = 190/249 (76%), Gaps = 1/249 (0%)
 Frame = -1

Query: 952 LYKAHAHYKFGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVNVPL 773
           + KAH HY FG LS CL++NYLDRFLSLYELP  K WTVQLLAVACLSLAAKMEE+NVPL
Sbjct: 103 ILKAHMHYGFGELSFCLSINYLDRFLSLYELPRSKTWTVQLLAVACLSLAAKMEEINVPL 162

Query: 772 AVDFQVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKMNNIDTLPSGSL 593
            VD QV DPKFVFE KTI+RMELLVLSTLKWRMQA TP +FIDYF+RKMN  D +PS  L
Sbjct: 163 TVDLQVGDPKFVFEGKTIQRMELLVLSTLKWRMQAYTPYTFIDYFMRKMNG-DQIPSRPL 221

Query: 592 INRSIQFILRTMKGIDFLEFRPSEISAAVAICVTKEIQTVDINKAM-AGVKHVEKDRVMK 416
           I+ S+Q IL  ++ IDFLEFR SEI+A+VA+ V+ EIQ  DI+KAM     H++K RV K
Sbjct: 222 ISGSMQLILSIIRSIDFLEFRSSEIAASVAMSVSGEIQAKDIDKAMPCFFIHLDKGRVQK 281

Query: 415 CIEMIQDLTLITETSNGRTIVATTQVPQSPNGVLDAAACLSYKSDERTVVGSCPNSSHTS 236
           C+E+IQDLT  T T    T  A + VPQSP GVL+AAACLSYKS +   VGSC  SSH  
Sbjct: 282 CVELIQDLTTATIT----TAAAASLVPQSPIGVLEAAACLSYKSGDERTVGSCTTSSH-- 335

Query: 235 PDTKRRRFD 209
             TKRR+ D
Sbjct: 336 --TKRRKLD 342


>ref|XP_004143552.1| PREDICTED: cyclin-D2-1-like [Cucumis sativus]
           gi|449527834|ref|XP_004170914.1| PREDICTED:
           cyclin-D2-1-like [Cucumis sativus]
          Length = 366

 Score =  290 bits (743), Expect = 3e-76
 Identities = 155/259 (59%), Positives = 192/259 (74%), Gaps = 8/259 (3%)
 Frame = -1

Query: 961 VEALYKAHAHYKFGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVN 782
           V+ ++KAHAHY FG LS+CL++NYLDRFLS+Y LP  K WTVQLL+VAC+SLAAKMEE  
Sbjct: 94  VDWIWKAHAHYSFGPLSLCLSMNYLDRFLSVYHLPMDKSWTVQLLSVACMSLAAKMEETE 153

Query: 781 VPLAVDFQVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKMNNIDTLPS 602
           VPL +D QV +PKFVFEAKTI+RMELLVLS LKW+MQA TP SFIDYFL K++       
Sbjct: 154 VPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKISVEQQNIP 213

Query: 601 GSLINRSIQFILRTMKGIDFLEFRPSEISAAVAICVTKEIQTVDINKAMAGVKHVEKDRV 422
               ++S Q IL T+KGIDFLEF+PSEI+ AVAI +++E QT D+NKA+    ++EK+RV
Sbjct: 214 NLYFSKSSQLILSTIKGIDFLEFKPSEIALAVAISISREFQTPDMNKAILSFPYMEKERV 273

Query: 421 MKCIEMIQDLTLITETSNGRTIVA--TTQVPQSPNGVLDAAACLSYKSDERTVVGSCPN- 251
           MKCI++I+D +LI+    G T+       VPQSP GVLD AACLSYK++E    GSC N 
Sbjct: 274 MKCIDLIRDFSLISNV-YGNTLGGGNVGSVPQSPVGVLD-AACLSYKTEELLTAGSCGNG 331

Query: 250 -----SSHTSPDTKRRRFD 209
                SSH S D+KRRR D
Sbjct: 332 NSSSSSSHDSQDSKRRRQD 350


>ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423|gb|AES96046.1| Cyclin
           D2 [Medicago truncatula]
          Length = 346

 Score =  289 bits (739), Expect = 8e-76
 Identities = 152/248 (61%), Positives = 194/248 (78%)
 Frame = -1

Query: 952 LYKAHAHYKFGALSVCLAVNYLDRFLSLYELPSGKKWTVQLLAVACLSLAAKMEEVNVPL 773
           ++KAHA+Y FG LS+CL+VNYLDRFLS+++ P G  WTVQLLAVAC SLAAKMEEV VP 
Sbjct: 99  IWKAHAYYGFGPLSLCLSVNYLDRFLSVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQ 158

Query: 772 AVDFQVADPKFVFEAKTIKRMELLVLSTLKWRMQACTPCSFIDYFLRKMNNIDTLPSGSL 593
           +VD QV +PKFVF+AKTI+RMEL++LS+L W+M+A TPCSFIDYFL K+ + +  P  SL
Sbjct: 159 SVDLQVGEPKFVFQAKTIQRMELMILSSLGWKMRALTPCSFIDYFLAKI-SCEKYPDKSL 217

Query: 592 INRSIQFILRTMKGIDFLEFRPSEISAAVAICVTKEIQTVDINKAMAGVKHVEKDRVMKC 413
           I RS+Q IL  +KGIDFLEFR SEI+AAVAI + KE+ T +++KA+     V+K+RV+KC
Sbjct: 218 IARSVQLILNIIKGIDFLEFRSSEIAAAVAISL-KELPTQEVDKAITDFFIVDKERVLKC 276

Query: 412 IEMIQDLTLITETSNGRTIVATTQVPQSPNGVLDAAACLSYKSDERTVVGSCPNSSHTSP 233
           +E+I+DL+LI    N       + VPQSP GVLD A C+S+KSDE T  GSCPNSSH+SP
Sbjct: 277 VELIRDLSLIKVGGNN----FASFVPQSPIGVLD-AGCMSFKSDELT-NGSCPNSSHSSP 330

Query: 232 DTKRRRFD 209
           + KR +FD
Sbjct: 331 NAKRMKFD 338


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