BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007849
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   194   6e-48
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   194   6e-48
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   194   6e-48
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         194   8e-48
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   193   1e-47

>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  194 bits (493), Expect = 6e-48
 Identities = 86/133 (64%), Positives = 110/133 (82%)
 Frame = +3

Query: 3   EEEIYMDQPEGFVASGNERKVCRLIKSIYGLKQAPRDWHDKFDETVLAFEFIINESDKCV 182
           +EEIYMDQP+GFV  G E KVC+L+KS+YGLKQAP+ WH+KFD+T+ +  F++NE+DKCV
Sbjct: 306 DEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFVVNEADKCV 365

Query: 183 YYKVRGNECIILCLYVDDILLFGSNIEIINETKSFLKSHFEMKDMGAASVILGIKLTESA 362
           YY+  G E +ILCLYVDDIL+FG+N+E+INE KSFL  +F+MKD+G A VIL IKL    
Sbjct: 366 YYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGE 425

Query: 363 DGITLSQSHYIEK 401
           +GITL QSHY+EK
Sbjct: 426 NGITLLQSHYVEK 438


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  194 bits (493), Expect = 6e-48
 Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3    EEEIYMDQPEGFVASGNERKVCRLIKSIYGLKQAPRDWHDKFDETVLAFEFIINESDKCV 182
            +EEIYMDQPEGF+A G E KVCRLIKS+YGLKQAP+ WH+KFD T+ A  F++NESD CV
Sbjct: 929  DEEIYMDQPEGFIADGQENKVCRLIKSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCV 988

Query: 183  YYKVRGNECIILCLYVDDILLFGSNIEIINETKSFLKSHFEMKDMGAASVILGIKLTESA 362
            YY+  G E ++LCLYVDDIL+FGSN+ +I E K+ L S+FEMKD+G A VIL IKL   A
Sbjct: 989  YYRYGGGESVMLCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVREA 1048

Query: 363  D-GITLSQSHYIEK 401
            D G+TL QSHY+EK
Sbjct: 1049 DGGVTLLQSHYVEK 1062


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
            gag/pol protein [Zea mays]
          Length = 1279

 Score =  194 bits (493), Expect = 6e-48
 Identities = 89/134 (66%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3    EEEIYMDQPEGFVASGNERKVCRLIKSIYGLKQAPRDWHDKFDETVLAFEFIINESDKCV 182
            +EEIYMDQPEGF+A G E KVCRLIKS+YGLKQAP+ WH+KFD T+ A  F++NESD CV
Sbjct: 889  DEEIYMDQPEGFIADGQENKVCRLIKSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCV 948

Query: 183  YYKVRGNECIILCLYVDDILLFGSNIEIINETKSFLKSHFEMKDMGAASVILGIKLTESA 362
            YY+  G E ++LCLYVDDIL+FGSN+ +I E K+ L S+FEMKD+G A VIL IKL   A
Sbjct: 949  YYRYGGGESVMLCLYVDDILIFGSNLNVIEEVKNLLSSNFEMKDLGEADVILNIKLVRKA 1008

Query: 363  D-GITLSQSHYIEK 401
            D G+TL QSHY+EK
Sbjct: 1009 DGGVTLLQSHYVEK 1022


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  194 bits (492), Expect = 8e-48
 Identities = 86/133 (64%), Positives = 110/133 (82%)
 Frame = +3

Query: 3    EEEIYMDQPEGFVASGNERKVCRLIKSIYGLKQAPRDWHDKFDETVLAFEFIINESDKCV 182
            +EEIYMDQP+GFV  G E KVC+L+KS+YGLKQAP+ WH+KFD+T+++  F +NE+DKCV
Sbjct: 913  DEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLISAGFAVNEADKCV 972

Query: 183  YYKVRGNECIILCLYVDDILLFGSNIEIINETKSFLKSHFEMKDMGAASVILGIKLTESA 362
            YY+  G E +ILCLYVDDIL+FG+N+E+INE KSFL  +F+MKD+G A VIL IKL    
Sbjct: 973  YYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGE 1032

Query: 363  DGITLSQSHYIEK 401
            +GITL QSHY+EK
Sbjct: 1033 NGITLLQSHYVEK 1045


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  193 bits (491), Expect = 1e-47
 Identities = 86/133 (64%), Positives = 109/133 (81%)
 Frame = +3

Query: 3    EEEIYMDQPEGFVASGNERKVCRLIKSIYGLKQAPRDWHDKFDETVLAFEFIINESDKCV 182
            +EEIYMDQP+GFV  G E KVC+L+KS+YGLKQAP+ WH+KFD+T+ +  F +NE+DKCV
Sbjct: 913  DEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCV 972

Query: 183  YYKVRGNECIILCLYVDDILLFGSNIEIINETKSFLKSHFEMKDMGAASVILGIKLTESA 362
            YY+  G E +ILCLYVDDIL+FG+N+E+INE KSFL  +F+MKD+G A VIL IKL    
Sbjct: 973  YYRYGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGE 1032

Query: 363  DGITLSQSHYIEK 401
            +GITL QSHY+EK
Sbjct: 1033 NGITLLQSHYVEK 1045