BLASTX nr result

ID: Cnidium21_contig00007401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00007401
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...    88   9e-20
ref|XP_002516727.1| uv excision repair protein rad23, putative [...    88   9e-20
ref|NP_001242098.1| uncharacterized protein LOC100813881 [Glycin...    88   3e-19
gb|ACU18529.1| unknown [Glycine max]                                   88   3e-19
ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23...    87   4e-19

>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
           gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score = 88.2 bits (217), Expect(2) = 9e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +1

Query: 37  MKVFVKTLKGTNFEIQVQPDNTISEVKNIIETKQGANVYPALQQILIHQGKVLKD 201
           MKVFVKTLKGT+FEI+V P +T+SEVK  IET QGA+VYPA QQ+LIHQGKVLKD
Sbjct: 1   MKVFVKTLKGTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKD 55



 Score = 33.5 bits (75), Expect(2) = 9e-20
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 285 EENNVAENSFIVIMLSK 335
           EEN VAENSFIVIMLSK
Sbjct: 60  EENKVAENSFIVIMLSK 76


>ref|XP_002516727.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223544100|gb|EEF45625.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 381

 Score = 88.2 bits (217), Expect(2) = 9e-20
 Identities = 42/55 (76%), Positives = 49/55 (89%)
 Frame = +1

Query: 37  MKVFVKTLKGTNFEIQVQPDNTISEVKNIIETKQGANVYPALQQILIHQGKVLKD 201
           MKVFVKTLKGTNFEI V+P++T+ +VKN IE  QGA+VYPA QQ+LIHQGKVLKD
Sbjct: 1   MKVFVKTLKGTNFEIDVKPEDTVEDVKNNIEIAQGADVYPASQQMLIHQGKVLKD 55



 Score = 33.5 bits (75), Expect(2) = 9e-20
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 285 EENNVAENSFIVIMLSK 335
           EEN VAENSFIVIMLSK
Sbjct: 60  EENKVAENSFIVIMLSK 76


>ref|NP_001242098.1| uncharacterized protein LOC100813881 [Glycine max]
           gi|255641670|gb|ACU21107.1| unknown [Glycine max]
          Length = 400

 Score = 88.2 bits (217), Expect(2) = 3e-19
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +1

Query: 37  MKVFVKTLKGTNFEIQVQPDNTISEVKNIIETKQGANVYPALQQILIHQGKVLKD 201
           MKVFVKTLKGT+FEI+V P +T+SEVK  IET QGA+VYPA QQ+LIHQGKVLKD
Sbjct: 1   MKVFVKTLKGTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKD 55



 Score = 31.6 bits (70), Expect(2) = 3e-19
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 285 EENNVAENSFIVIMLSK 335
           EEN VAE+SFIVIMLSK
Sbjct: 60  EENKVAESSFIVIMLSK 76


>gb|ACU18529.1| unknown [Glycine max]
          Length = 382

 Score = 88.2 bits (217), Expect(2) = 3e-19
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +1

Query: 37  MKVFVKTLKGTNFEIQVQPDNTISEVKNIIETKQGANVYPALQQILIHQGKVLKD 201
           MKVFVKTLKGT+FEI+V P +T+SEVK  IET QGA+VYPA QQ+LIHQGKVLKD
Sbjct: 1   MKVFVKTLKGTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKD 55



 Score = 31.6 bits (70), Expect(2) = 3e-19
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 285 EENNVAENSFIVIMLSK 335
           EEN VAE+SFIVIMLSK
Sbjct: 60  EENKVAESSFIVIMLSK 76


>ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
           [Glycine max]
          Length = 402

 Score = 87.0 bits (214), Expect(2) = 4e-19
 Identities = 42/55 (76%), Positives = 49/55 (89%)
 Frame = +1

Query: 37  MKVFVKTLKGTNFEIQVQPDNTISEVKNIIETKQGANVYPALQQILIHQGKVLKD 201
           MKVFVKTLKGT+FEI+V P +T+SEVK  IET QGA+VYPA QQ+LIHQGKVL+D
Sbjct: 1   MKVFVKTLKGTHFEIEVTPQDTVSEVKKNIETVQGADVYPAAQQMLIHQGKVLRD 55



 Score = 32.3 bits (72), Expect(2) = 4e-19
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 285 EENNVAENSFIVIMLSK 335
           EEN VAEN+FIVIMLSK
Sbjct: 60  EENKVAENTFIVIMLSK 76


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