BLASTX nr result

ID: Cnidium21_contig00006149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006149
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ...   255   4e-66
gb|ABB16971.1| unknown [Solanum tuberosum]                            251   4e-65
gb|ABX26124.1| bypass1 [Nicotiana benthamiana]                        246   2e-63
ref|XP_002511905.1| conserved hypothetical protein [Ricinus comm...   245   3e-63
gb|ABX26123.1| bypass2 [Nicotiana benthamiana]                        241   6e-62

>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
          Length = 350

 Score =  255 bits (651), Expect = 4e-66
 Identities = 121/187 (64%), Positives = 141/187 (75%)
 Frame = +3

Query: 3   PLFPFGNPFRMILPKGSYLSPGXXXXXXXXXXXXXXXXRKLKPKNRDDVLTLSWMRYAMD 182
           P FPFGNPFRMILPKGSYLSP                 RKLKPK  +DVL+ SWM+ AM+
Sbjct: 10  PSFPFGNPFRMILPKGSYLSPRLLSLLNDFENTLAERLRKLKPKGTEDVLSCSWMKLAME 69

Query: 183 SLCAVHTDIKTLITALELPVSDWDDKWIDVYLDNSVKMLDICIGFSAELSRLKQGHLFLQ 362
            LC +H DIK LIT LELPV DWDDKWIDVYLDNSVK+LDICI  S+ELSRL QGHL LQ
Sbjct: 70  LLCEIHKDIKILITDLELPVCDWDDKWIDVYLDNSVKLLDICIALSSELSRLNQGHLLLQ 129

Query: 363 CVMRNMDSVPSNQFIRARSSLDDWKHHITAKNSRIDNCFTILDNLVATLNEPKVKNSSKG 542
           CV+RN+D+    Q +RARSSLD W+ HI +KN ++ NC TILD+L  ++N PK+KNS+KG
Sbjct: 130 CVLRNLDTASPKQLVRARSSLDSWRQHIGSKNPKLQNCLTILDSLAESINLPKIKNSAKG 189

Query: 543 KVLMRAM 563
           KVLMRAM
Sbjct: 190 KVLMRAM 196


>gb|ABB16971.1| unknown [Solanum tuberosum]
          Length = 352

 Score =  251 bits (642), Expect = 4e-65
 Identities = 117/187 (62%), Positives = 143/187 (76%)
 Frame = +3

Query: 3   PLFPFGNPFRMILPKGSYLSPGXXXXXXXXXXXXXXXXRKLKPKNRDDVLTLSWMRYAMD 182
           P  PFGNPF+ ILPKGSYLSP                 + LKP  ++D+LTLSWM  A+ 
Sbjct: 10  PFLPFGNPFKFILPKGSYLSPKLLALLNAFEESLAERVKSLKPGGKEDILTLSWMTQAIS 69

Query: 183 SLCAVHTDIKTLITALELPVSDWDDKWIDVYLDNSVKMLDICIGFSAELSRLKQGHLFLQ 362
           +LCA+HTD+KTLIT LELPV DWD+KWIDVYLDNSVK+LDICI FS+++SRL QGHL+LQ
Sbjct: 70  TLCAIHTDVKTLITELELPVCDWDEKWIDVYLDNSVKLLDICIAFSSDISRLNQGHLYLQ 129

Query: 363 CVMRNMDSVPSNQFIRARSSLDDWKHHITAKNSRIDNCFTILDNLVATLNEPKVKNSSKG 542
           C + N+D   SNQF++ARSS D WK HI +KN R++NCF ILD+L  +LN PK+KNS+KG
Sbjct: 130 CGLHNLDGT-SNQFMKARSSFDGWKQHINSKNPRLENCFAILDSLTESLNLPKIKNSAKG 188

Query: 543 KVLMRAM 563
           KVLMRAM
Sbjct: 189 KVLMRAM 195


>gb|ABX26124.1| bypass1 [Nicotiana benthamiana]
          Length = 352

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/187 (61%), Positives = 144/187 (77%)
 Frame = +3

Query: 3   PLFPFGNPFRMILPKGSYLSPGXXXXXXXXXXXXXXXXRKLKPKNRDDVLTLSWMRYAMD 182
           P   FGNPF+MILPKGSYLSP                 R L+P  ++D+L+LSWM+  + 
Sbjct: 10  PSLRFGNPFKMILPKGSYLSPRLLALLNAFEGTLAGRLRSLEPGGKEDILSLSWMKQTIA 69

Query: 183 SLCAVHTDIKTLITALELPVSDWDDKWIDVYLDNSVKMLDICIGFSAELSRLKQGHLFLQ 362
           +LCA+HTD+KTLIT LELPVSDWD+KWIDVYLDNS+KMLD+CI +S+E+SRL QGHL+LQ
Sbjct: 70  TLCAIHTDVKTLITDLELPVSDWDEKWIDVYLDNSLKMLDMCIAYSSEISRLSQGHLYLQ 129

Query: 363 CVMRNMDSVPSNQFIRARSSLDDWKHHITAKNSRIDNCFTILDNLVATLNEPKVKNSSKG 542
           C + N+D   S QF++ARSSLD WKHHI +KN R++NCF ILD+L  +LN PK+KNS+KG
Sbjct: 130 CGLHNLDG-SSTQFMKARSSLDGWKHHINSKNHRLENCFAILDSLSESLNLPKIKNSAKG 188

Query: 543 KVLMRAM 563
           KVLM AM
Sbjct: 189 KVLMHAM 195


>ref|XP_002511905.1| conserved hypothetical protein [Ricinus communis]
           gi|223549085|gb|EEF50574.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 381

 Score =  245 bits (626), Expect = 3e-63
 Identities = 117/187 (62%), Positives = 145/187 (77%)
 Frame = +3

Query: 3   PLFPFGNPFRMILPKGSYLSPGXXXXXXXXXXXXXXXXRKLKPKNRDDVLTLSWMRYAMD 182
           P F FGNPFRM+ PKGS L+P                 +KL PK++DDVL+L+WM+ AM+
Sbjct: 10  PFFSFGNPFRMMSPKGSQLTPRLLSLLNAFEETLVERLKKLIPKDKDDVLSLTWMKSAME 69

Query: 183 SLCAVHTDIKTLITALELPVSDWDDKWIDVYLDNSVKMLDICIGFSAELSRLKQGHLFLQ 362
           SLC  HTDIKTLIT LELPV++WD+KWIDVYLD SVK+LDICI FS+ELSRL QGHL LQ
Sbjct: 70  SLCETHTDIKTLITDLELPVANWDEKWIDVYLDISVKLLDICIAFSSELSRLNQGHLLLQ 129

Query: 363 CVMRNMDSVPSNQFIRARSSLDDWKHHITAKNSRIDNCFTILDNLVATLNEPKVKNSSKG 542
           CV+ N++S  S QF+RA +SLD W+ HI++KN R++NC +IL+NL  +LN PKVKNS+KG
Sbjct: 130 CVLHNLESNTSKQFVRASASLDSWRQHISSKNQRVENCRSILENLRGSLNLPKVKNSAKG 189

Query: 543 KVLMRAM 563
           KVLMRAM
Sbjct: 190 KVLMRAM 196


>gb|ABX26123.1| bypass2 [Nicotiana benthamiana]
          Length = 352

 Score =  241 bits (615), Expect = 6e-62
 Identities = 113/187 (60%), Positives = 140/187 (74%)
 Frame = +3

Query: 3   PLFPFGNPFRMILPKGSYLSPGXXXXXXXXXXXXXXXXRKLKPKNRDDVLTLSWMRYAMD 182
           P  PFGNPF+ ILPKGSYLSP                 + LKP +++D+LTLSWM  A+ 
Sbjct: 10  PFLPFGNPFKFILPKGSYLSPKLLALLNAFEESLAERVKSLKPADKEDILTLSWMTQAIS 69

Query: 183 SLCAVHTDIKTLITALELPVSDWDDKWIDVYLDNSVKMLDICIGFSAELSRLKQGHLFLQ 362
            LCA+HTD+KTLIT LE PV DWD+KWID+YLDNSVK+LD CI FS+++SRL QG L+LQ
Sbjct: 70  VLCAIHTDVKTLITELEFPVCDWDEKWIDLYLDNSVKLLDTCIAFSSDISRLVQGCLYLQ 129

Query: 363 CVMRNMDSVPSNQFIRARSSLDDWKHHITAKNSRIDNCFTILDNLVATLNEPKVKNSSKG 542
           C + N+D   S QF++ARSSLD WKHHI +KN R++ CF ILD+L  +LN PK+KNS+KG
Sbjct: 130 CGLHNLDGT-SKQFMKARSSLDGWKHHIQSKNPRLEKCFAILDSLAESLNLPKIKNSAKG 188

Query: 543 KVLMRAM 563
           KVLMRAM
Sbjct: 189 KVLMRAM 195


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