BLASTX nr result

ID: Cnidium21_contig00005120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005120
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   166   2e-39
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   164   5e-39
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   160   1e-37
emb|CBI40396.3| unnamed protein product [Vitis vinifera]              160   1e-37
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   159   2e-37

>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  166 bits (419), Expect = 2e-39
 Identities = 87/156 (55%), Positives = 114/156 (73%), Gaps = 3/156 (1%)
 Frame = +2

Query: 2    EPNSQKLEKSDPSLKTRRGSHSRKNSNSGKLLASQKPGKVNVMSAPLEDATEHSRESWDN 181
            EPN  + ++SD S K RR   SR+ +N+ KL AS K  ++++ +AP EDA EHSRESWD 
Sbjct: 1866 EPNPSRHDQSDSS-KNRRTIPSRRIANTSKLHASPKSSRLHMQAAPPEDAAEHSRESWDG 1924

Query: 182  KAMYKAGNSI-DNKMSDGIQHRCKNVINKFQRRIDREGHQIVPLLTELWKKSETTGYM-- 352
            K    +G+S+  +KMSD IQ RCKNVI+K QRRID+EG  IVP+LT+LWK+ E++GYM  
Sbjct: 1925 KVTNASGSSVLGSKMSDVIQRRCKNVISKLQRRIDKEGQHIVPVLTDLWKRMESSGYMSG 1984

Query: 353  GGNSQLDIRKIYQRLENFDYNGVMELCSDVQLMLKG 460
             GN+ LD+RKI  R++  +YNGVMEL  DVQ MLKG
Sbjct: 1985 AGNNLLDLRKIETRVDRLEYNGVMELVVDVQFMLKG 2020


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  164 bits (416), Expect = 5e-39
 Identities = 87/155 (56%), Positives = 110/155 (70%), Gaps = 2/155 (1%)
 Frame = +2

Query: 2    EPNSQKLEKSDPSLKTRRGSHSRKNSNSGKLLASQKPGKVNVMSAPLEDATEHSRESWDN 181
            EP+  K ++SD S ++RR   SR+ + + KL AS K  ++N+ SAP EDA EHSRESWD 
Sbjct: 1845 EPSGFKHDQSDSS-RSRRNLPSRRIAKTSKLRASPKSSRLNLQSAPAEDAAEHSRESWDG 1903

Query: 182  KAMYKAGNSIDNKMSDGIQHRCKNVINKFQRRIDREGHQIVPLLTELWKKSETTGYM--G 355
            K    +G S   KMSD IQ RCKNVI+KFQRRID+EG QIVPLL +LWK+ E  GY+   
Sbjct: 1904 KVPSTSGASTLGKMSDVIQRRCKNVISKFQRRIDKEGQQIVPLLADLWKRIENPGYISGA 1963

Query: 356  GNSQLDIRKIYQRLENFDYNGVMELCSDVQLMLKG 460
            G + LD+RKI QR++  +Y+GVMEL  DVQ MLKG
Sbjct: 1964 GTNLLDLRKIEQRVDRLEYSGVMELVFDVQFMLKG 1998


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  160 bits (404), Expect = 1e-37
 Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2    EPNSQKLEKSDPSLKTRRGSHSRKNSNSGKLLASQKPGKVNVMSAPLEDATEHSRESWDN 181
            E N+ K ++SD SLK+RR   SRK  N+ KL AS K GK+N MSA  ED  EHSRE WD 
Sbjct: 1880 ESNAFKHDQSDSSLKSRRNLPSRKIGNTSKLHASPKSGKLNCMSARAEDVAEHSREGWDG 1939

Query: 182  KAMYKAGNSIDNKMSDGIQHRCKNVINKFQRRIDREGHQIVPLLTELWKKSETTGYMG-- 355
            K M   G     +M + +Q +CKNVI+K QRRID+EGHQIVPLLT+ WK+ E +GY+   
Sbjct: 1940 KVMNTGG----PRMPEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVENSGYISGP 1995

Query: 356  GNSQLDIRKIYQRLENFDYNGVMELCSDVQLMLK 457
            GN+ LD+RKI QR++  +Y GVMEL  DVQ MLK
Sbjct: 1996 GNNILDLRKIDQRIDRLEYIGVMELVFDVQQMLK 2029


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score =  160 bits (404), Expect = 1e-37
 Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2    EPNSQKLEKSDPSLKTRRGSHSRKNSNSGKLLASQKPGKVNVMSAPLEDATEHSRESWDN 181
            E N+ K ++SD SLK+RR   SRK  N+ KL AS K GK+N MSA  ED  EHSRE WD 
Sbjct: 1630 ESNAFKHDQSDSSLKSRRNLPSRKIGNTSKLHASPKSGKLNCMSARAEDVAEHSREGWDG 1689

Query: 182  KAMYKAGNSIDNKMSDGIQHRCKNVINKFQRRIDREGHQIVPLLTELWKKSETTGYMG-- 355
            K M   G     +M + +Q +CKNVI+K QRRID+EGHQIVPLLT+ WK+ E +GY+   
Sbjct: 1690 KVMNTGG----PRMPEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVENSGYISGP 1745

Query: 356  GNSQLDIRKIYQRLENFDYNGVMELCSDVQLMLK 457
            GN+ LD+RKI QR++  +Y GVMEL  DVQ MLK
Sbjct: 1746 GNNILDLRKIDQRIDRLEYIGVMELVFDVQQMLK 1779


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  159 bits (403), Expect = 2e-37
 Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2    EPNSQKLEKSDPSLKTRRGSHSRKNSNSGKLLASQKPGKVNVMSAPLEDATEHSRESWDN 181
            E N+ K ++SD SLK+RR   SRK  N+ KL AS K GK+N MSA  ED  EHSRE WD 
Sbjct: 1855 ESNAFKHDQSDSSLKSRRNLPSRKIGNTSKLHASPKSGKLNCMSARAEDVAEHSREGWDG 1914

Query: 182  KAMYKAGNSIDNKMSDGIQHRCKNVINKFQRRIDREGHQIVPLLTELWKKSETTGYMG-- 355
            K M   G     +M + +Q +CKNVI+K QRRID+EGHQIVPLLT+ WK+ E +GY+   
Sbjct: 1915 KVMNTGG----PRMPEIMQRKCKNVISKLQRRIDKEGHQIVPLLTDWWKRVEXSGYISGP 1970

Query: 356  GNSQLDIRKIYQRLENFDYNGVMELCSDVQLMLK 457
            GN+ LD+RKI QR++  +Y GVMEL  DVQ MLK
Sbjct: 1971 GNNILDLRKIDQRIDRLEYIGVMELVFDVQQMLK 2004


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