BLASTX nr result

ID: Cnidium21_contig00003433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00003433
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329195.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|XP_002520894.1| conserved hypothetical protein [Ricinus comm...   372   e-100
ref|XP_004141508.1| PREDICTED: uncharacterized protein LOC101215...   370   e-100
ref|NP_191202.1| uncharacterized protein [Arabidopsis thaliana] ...   369   1e-99
ref|XP_002878085.1| hypothetical protein ARALYDRAFT_907085 [Arab...   368   2e-99

>ref|XP_002329195.1| predicted protein [Populus trichocarpa] gi|222870976|gb|EEF08107.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  375 bits (963), Expect = e-101
 Identities = 209/340 (61%), Positives = 248/340 (72%), Gaps = 12/340 (3%)
 Frame = -3

Query: 1192 MSKPTSKLI---IRCLHRHLISSKPSLNSHPIANFTGISQFLAHQPKVQTHNFTPW---- 1034
            MSK + ++I   ++  + H+ +SKPS  + P +  + IS          + NFTP     
Sbjct: 1    MSKNSPRIIQGLLKLHYNHVSTSKPSPLTTP-SLASRISTSFTRPYSNASSNFTPLNSQI 59

Query: 1033 -MFSGQ---RNYGLPLFPKILKNPGPQLSPKSNLSLLGFRQFSKKGLN-LDGNAYGKYVK 869
              F+ +    N GL  F    K P    S K+     G RQFS KG + L     G + K
Sbjct: 60   PCFTSKPTSSNLGLSQFLSCTK-PNSSFS-KNGSFFYGVRQFSFKGSSDLGKRVDGNFAK 117

Query: 868  SAVEKPVSVAKNVVSRYKEAAGLQIEAFWKRNSLLFVGAGGLMVCILLWRVMFGVANTFV 689
              +EKP +   +  SRY+EA GLQI+AF KRNSL  +GAGG+++C LLWR+MFG+ANTFV
Sbjct: 118  KLLEKPATAVTSAFSRYREALGLQIDAFLKRNSLFLIGAGGVIICALLWRIMFGIANTFV 177

Query: 688  GLSEGMAKYGFLALSAAIVAFSGLYLRSKFMINPDKVYRIAMRRLNTSAGILEVMGAPLT 509
             LSEGMAKYGFLALS+AIVAFSGLY+RS+  INPDKVYR+AM +LNTSAGILEVMGAPLT
Sbjct: 178  SLSEGMAKYGFLALSSAIVAFSGLYIRSRITINPDKVYRMAMTKLNTSAGILEVMGAPLT 237

Query: 508  GTDLRAYVMSGGGLTLKNFKAGFRGKRCFLIFPIRGSERKGLVSVEVKNKKGQYDMKLLA 329
            GT LRAYVMSGGGL LKNFK   R KRCFLIFPI+GSERKGLVSVEVK KKGQYDM+LLA
Sbjct: 238  GTVLRAYVMSGGGLVLKNFKPTVRSKRCFLIFPIQGSERKGLVSVEVKKKKGQYDMRLLA 297

Query: 328  VDIPMATGPDQRLFLVGDEEEYKIGGGLIAELRDPVVKAM 209
            VDIPMA+GPDQRLFL+GDEEEYK+GGGLI+ELRDPVVKAM
Sbjct: 298  VDIPMASGPDQRLFLIGDEEEYKVGGGLISELRDPVVKAM 337


>ref|XP_002520894.1| conserved hypothetical protein [Ricinus communis]
            gi|223540025|gb|EEF41603.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 364

 Score =  372 bits (955), Expect = e-100
 Identities = 204/337 (60%), Positives = 244/337 (72%), Gaps = 9/337 (2%)
 Frame = -3

Query: 1192 MSKPTSKLI----IRCLHRHLISSKPSLNSHPIANFTGISQFLAHQPKVQTHNFTPWMFS 1025
            MSKP+ ++I    ++  H +++S+   +       F+ ++  +   P     +FT    S
Sbjct: 1    MSKPSQRIINGLLLKLHHSNILSNSKPITKPYSNGFSTLNSRIPFNP-----SFTSKPTS 55

Query: 1024 GQRNYGLPLFPKILKNPGPQLSPKSNLSLLGF-----RQFSKKGLNLDGNAYGKYVKSAV 860
               N GL  F   L    P     S+L+         R FS K  NL     G + +  +
Sbjct: 56   S--NVGLSQF---LSRANPYYYSSSSLAKQSCWYGVKRHFSLKTSNLGKTVNGDFARKVL 110

Query: 859  EKPVSVAKNVVSRYKEAAGLQIEAFWKRNSLLFVGAGGLMVCILLWRVMFGVANTFVGLS 680
            EKP +      SRY+EA GLQI+AF KRN LL VGAGG++VC LLWR+MFG+ANTFVGLS
Sbjct: 111  EKPATT----FSRYREAIGLQIDAFCKRNVLLLVGAGGVIVCALLWRIMFGIANTFVGLS 166

Query: 679  EGMAKYGFLALSAAIVAFSGLYLRSKFMINPDKVYRIAMRRLNTSAGILEVMGAPLTGTD 500
            EGMAKYGFLALS+AIVAF+GLY+RS+  +NPD+VYRIAMR+LNTSA ILEVMGAPLTGT+
Sbjct: 167  EGMAKYGFLALSSAIVAFAGLYIRSRITVNPDRVYRIAMRKLNTSAAILEVMGAPLTGTE 226

Query: 499  LRAYVMSGGGLTLKNFKAGFRGKRCFLIFPIRGSERKGLVSVEVKNKKGQYDMKLLAVDI 320
            LRAYVMSGGG+TLKNFK   R KRCFLIFPIRGSERKGLVSVEVK KKGQYDMKLLAVDI
Sbjct: 227  LRAYVMSGGGVTLKNFKPRLRSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDI 286

Query: 319  PMATGPDQRLFLVGDEEEYKIGGGLIAELRDPVVKAM 209
            PMA+GPDQRLFL+GDE+EYK+GGGLIAELRDPVVKAM
Sbjct: 287  PMASGPDQRLFLIGDEDEYKVGGGLIAELRDPVVKAM 323


>ref|XP_004141508.1| PREDICTED: uncharacterized protein LOC101215996 [Cucumis sativus]
          Length = 377

 Score =  370 bits (950), Expect = e-100
 Identities = 197/317 (62%), Positives = 233/317 (73%), Gaps = 4/317 (1%)
 Frame = -3

Query: 1147 HLISSKPSLNSH----PIANFTGISQFLAHQPKVQTHNFTPWMFSGQRNYGLPLFPKILK 980
            H  SS PS  S     PI++  G+SQFL + PK+   N +             L  K+  
Sbjct: 45   HSFSSAPSFQSKFPSKPISSNVGLSQFL-YSPKLTAGNSS-------------LVTKL-- 88

Query: 979  NPGPQLSPKSNLSLLGFRQFSKKGLNLDGNAYGKYVKSAVEKPVSVAKNVVSRYKEAAGL 800
                     ++ S   FR FS K     G   G + K  ++KP +   +  SRY+EA GL
Sbjct: 89   --------NAHHSASRFRFFSVKIPRFGGQINGNFAKKVIDKPAAAVSSAFSRYREAIGL 140

Query: 799  QIEAFWKRNSLLFVGAGGLMVCILLWRVMFGVANTFVGLSEGMAKYGFLALSAAIVAFSG 620
            QIEAF+KRN L+ +G    ++C LLW++MFG+ANTFVGLSEGMAKYGFLALS+AIVAF+G
Sbjct: 141  QIEAFFKRNYLVLLGFAAALICALLWKIMFGIANTFVGLSEGMAKYGFLALSSAIVAFTG 200

Query: 619  LYLRSKFMINPDKVYRIAMRRLNTSAGILEVMGAPLTGTDLRAYVMSGGGLTLKNFKAGF 440
            LY+RS+F +NPD+VYR+AMR+LNTSAGILEVMGAPLTG+DLRAYVMSGGG TLKNF    
Sbjct: 201  LYMRSRFTVNPDRVYRMAMRKLNTSAGILEVMGAPLTGSDLRAYVMSGGGFTLKNFAPNR 260

Query: 439  RGKRCFLIFPIRGSERKGLVSVEVKNKKGQYDMKLLAVDIPMATGPDQRLFLVGDEEEYK 260
            R KRCFLIFPIRGSERKGLVSVEVK KKGQYDMKLLAVDIPMA+GPDQRLFL+G+EEEYK
Sbjct: 261  RSKRCFLIFPIRGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFLIGNEEEYK 320

Query: 259  IGGGLIAELRDPVVKAM 209
            IGGGLI+ELRDPVVKAM
Sbjct: 321  IGGGLISELRDPVVKAM 337


>ref|NP_191202.1| uncharacterized protein [Arabidopsis thaliana]
            gi|7594521|emb|CAB88046.1| putative protein [Arabidopsis
            thaliana] gi|63003794|gb|AAY25426.1| At3g56430
            [Arabidopsis thaliana] gi|114213521|gb|ABI54343.1|
            At3g56430 [Arabidopsis thaliana]
            gi|332646000|gb|AEE79521.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 434

 Score =  369 bits (946), Expect = 1e-99
 Identities = 196/325 (60%), Positives = 242/325 (74%), Gaps = 12/325 (3%)
 Frame = -3

Query: 1147 HLISSKPSLNSHPIANF---TGISQFLAHQPKVQTHNFTPWMFSGQRNYGLPLF---PKI 986
            H  SS+P+  +  ++      G+SQ    QPK   H+F     S  +N GL      PK+
Sbjct: 55   HTFSSRPTSKNFGLSQILPSNGVSQL---QPKTSFHSFLSRPTS--KNVGLSQILPSPKL 109

Query: 985  ---LKNPGPQL-SPKSNLSLLG-FRQFSKKGLN-LDGNAYGKYVKSAVEKPVSVAKNVVS 824
               L+N G  L  P+ N++ +  FR FS  G   +DGN    + +  V+KP+    +  +
Sbjct: 110  VPGLQNCGVALVKPRVNMNFVSAFRLFSSSGFRKVDGN----FARKVVDKPIKAVSSTFA 165

Query: 823  RYKEAAGLQIEAFWKRNSLLFVGAGGLMVCILLWRVMFGVANTFVGLSEGMAKYGFLALS 644
            RY+ A GL ++AFWK+N+LL  GAG + VCI LWRVMFG+A+TFVGLSEGMAKYGFLALS
Sbjct: 166  RYRMALGLHVDAFWKKNNLLVFGAGAVFVCIFLWRVMFGIASTFVGLSEGMAKYGFLALS 225

Query: 643  AAIVAFSGLYLRSKFMINPDKVYRIAMRRLNTSAGILEVMGAPLTGTDLRAYVMSGGGLT 464
            +AIVAF+GLYLR++F INPDKVYRI MR+LNT+A +LEVMGAPL G+DLRAYVMSGGG+T
Sbjct: 226  SAIVAFAGLYLRARFTINPDKVYRITMRKLNTAADVLEVMGAPLAGSDLRAYVMSGGGIT 285

Query: 463  LKNFKAGFRGKRCFLIFPIRGSERKGLVSVEVKNKKGQYDMKLLAVDIPMATGPDQRLFL 284
             K FK   R KRCFL+FP++GSERKGLVSVEVK KKGQYDMKLLAVDIPMA+GPDQRLFL
Sbjct: 286  FKKFKPTIRNKRCFLLFPVQGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFL 345

Query: 283  VGDEEEYKIGGGLIAELRDPVVKAM 209
            +GDEEEY++GGGLI+ELRDPVVKAM
Sbjct: 346  IGDEEEYRVGGGLISELRDPVVKAM 370


>ref|XP_002878085.1| hypothetical protein ARALYDRAFT_907085 [Arabidopsis lyrata subsp.
            lyrata] gi|297323923|gb|EFH54344.1| hypothetical protein
            ARALYDRAFT_907085 [Arabidopsis lyrata subsp. lyrata]
          Length = 438

 Score =  368 bits (944), Expect = 2e-99
 Identities = 197/322 (61%), Positives = 238/322 (73%), Gaps = 16/322 (4%)
 Frame = -3

Query: 1126 SLNSHPIANFTGISQFLAH------QPKVQTHNFTPWMFSGQRNYGL----PLFPKI--- 986
            S +S P A   G+SQ L        QPK   H+F     S  +N GL    P  PK+   
Sbjct: 56   SFSSRPTAKNFGLSQILPSNGVSQLQPKTSFHSFLSRPTS--KNLGLSQILPSSPKLVPS 113

Query: 985  LKNPGPQL-SPKSNLSLLG-FRQFSKKGLN-LDGNAYGKYVKSAVEKPVSVAKNVVSRYK 815
            L+N G  L  P+ N++    FR FS  G   +DGN    + +  V+KP+    +  +RY+
Sbjct: 114  LQNCGVALVKPRVNVNFASAFRLFSSSGFRKIDGN----FARKVVDKPIQAVSSTFARYR 169

Query: 814  EAAGLQIEAFWKRNSLLFVGAGGLMVCILLWRVMFGVANTFVGLSEGMAKYGFLALSAAI 635
             A GL I+AFWK+N+LL  GAG + VCI LWR+MFG+A+TFVGLSEGMAKYGFLALS+AI
Sbjct: 170  MALGLHIDAFWKKNNLLVFGAGAVFVCIFLWRIMFGIASTFVGLSEGMAKYGFLALSSAI 229

Query: 634  VAFSGLYLRSKFMINPDKVYRIAMRRLNTSAGILEVMGAPLTGTDLRAYVMSGGGLTLKN 455
            VAF+GLYLR++F INPDKVYRI MR+LNT+A +LEVMGAPL G+DLRAYVMSGGG+T K 
Sbjct: 230  VAFAGLYLRARFTINPDKVYRITMRKLNTAADVLEVMGAPLAGSDLRAYVMSGGGITFKK 289

Query: 454  FKAGFRGKRCFLIFPIRGSERKGLVSVEVKNKKGQYDMKLLAVDIPMATGPDQRLFLVGD 275
            FK   R KRCFL+FP++GSERKGLVSVEVK KKGQYDMKLLAVDIPMA+GPDQRLFL+GD
Sbjct: 290  FKPTIRNKRCFLLFPVQGSERKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFLIGD 349

Query: 274  EEEYKIGGGLIAELRDPVVKAM 209
            E EY++GGGLI+ELRDPVVKAM
Sbjct: 350  EVEYRVGGGLISELRDPVVKAM 371


Top