BLASTX nr result

ID: Cnidium21_contig00002594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002594
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF95071.1| voltage-dependent anion channel [Nicotiana tabacum]   434   e-119
ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   434   e-119
sp|P42056.2|VDAC2_SOLTU RecName: Full=Mitochondrial outer membra...   430   e-118
emb|CAA56601.1| 36kDa porin I [Solanum tuberosum]                     430   e-118
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...   424   e-116

>dbj|BAF95071.1| voltage-dependent anion channel [Nicotiana tabacum]
          Length = 276

 Score =  434 bits (1116), Expect = e-119
 Identities = 218/276 (78%), Positives = 245/276 (88%)
 Frame = -3

Query: 1086 MAKGPGLYSDIGKKARDLLYKDYQSHHKFTVSTVAANGLAITPSATKKGESFLADVNAQW 907
            M KGPGLYSDIGKKARDLLY+DY S HKFTV+T ++ G+AIT S  KKGE FLADVN Q 
Sbjct: 1    MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSSTGVAITSSGLKKGELFLADVNTQL 60

Query: 906  KNNNITTDLKLDINSNLCSTITIDELAPGLKTILSFVAPDQRSGKVEVQYFHEHAGISTS 727
            KN N+TTD+K+D NSN+ +TIT+DE APGLKTI+SFV PDQRSGKVE+QY HE+AGIST 
Sbjct: 61   KNKNVTTDVKVDTNSNVYTTITVDEPAPGLKTIVSFVLPDQRSGKVELQYLHEYAGISTG 120

Query: 726  IGLAATPLVSFSGVAGSNTVALGTDISFDTASGNFTKYNAALNFSSGDLIASFALNDKFD 547
            IGL A+PLV+FSGVAG+NTVALGTD+SFDTASGNFTK NA L+FS+ DLIAS ALNDK D
Sbjct: 121  IGLTASPLVNFSGVAGNNTVALGTDLSFDTASGNFTKCNAGLSFSTSDLIASLALNDKGD 180

Query: 546  TLTASYMHTVNPLTNTAVGAELSHCFSSNENTLTIGTQHALDPLTSVKARVNNNGIASAL 367
            TL+ASY HTV P+TNTAVGAEL+H FSSNENTLTIGTQH LDPLT+VKARVN+ G ASAL
Sbjct: 181  TLSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASAL 240

Query: 366  IQHAWRPKSLFTISGEVDTRAIEKSAKVGLALALKP 259
            IQH WRPKSLFTISGEVDTRAIEKSAK+GLA+ALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276


>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
            isoform 1 [Vitis vinifera]
          Length = 276

 Score =  434 bits (1115), Expect = e-119
 Identities = 214/276 (77%), Positives = 241/276 (87%)
 Frame = -3

Query: 1086 MAKGPGLYSDIGKKARDLLYKDYQSHHKFTVSTVAANGLAITPSATKKGESFLADVNAQW 907
            M KGPGLYSDIGK ARDLLY+DYQS HKFTV+T  ++G+AIT S TKKGE F+ADVN Q 
Sbjct: 1    MGKGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQL 60

Query: 906  KNNNITTDLKLDINSNLCSTITIDELAPGLKTILSFVAPDQRSGKVEVQYFHEHAGISTS 727
            KN NITTD+K+D NSNL +TIT+DE APGLKTI SF+ PDQRSGKVE+QY HE+AGISTS
Sbjct: 61   KNKNITTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTS 120

Query: 726  IGLAATPLVSFSGVAGSNTVALGTDISFDTASGNFTKYNAALNFSSGDLIASFALNDKFD 547
            IGL A P+V+FSGV G+NT++LGTD+SFDTA+GNFTK NA L FS+ DLIA+  LNDK D
Sbjct: 121  IGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGD 180

Query: 546  TLTASYMHTVNPLTNTAVGAELSHCFSSNENTLTIGTQHALDPLTSVKARVNNNGIASAL 367
            TL ASY HTV+PLTNTAVGAELSHCFS+NENTLTIGTQHALDPLT VKAR NN+G  SAL
Sbjct: 181  TLNASYYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSAL 240

Query: 366  IQHAWRPKSLFTISGEVDTRAIEKSAKVGLALALKP 259
            IQH WRPKSLFTISGEVD RA+EKSAK+GLALALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDARAVEKSAKIGLALALKP 276


>sp|P42056.2|VDAC2_SOLTU RecName: Full=Mitochondrial outer membrane protein porin of 36 kDa;
            AltName: Full=POM 36; AltName: Full=Voltage-dependent
            anion-selective channel protein; Short=VDAC
            gi|515360|emb|CAA56600.1| 36kDA porin II [Solanum
            tuberosum]
          Length = 276

 Score =  430 bits (1106), Expect = e-118
 Identities = 216/276 (78%), Positives = 244/276 (88%)
 Frame = -3

Query: 1086 MAKGPGLYSDIGKKARDLLYKDYQSHHKFTVSTVAANGLAITPSATKKGESFLADVNAQW 907
            M KGPGLYSDIGKKARDLLY+DY S HKFTV+T +  G+AIT S  KKGE FLADV+ Q 
Sbjct: 1    MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQL 60

Query: 906  KNNNITTDLKLDINSNLCSTITIDELAPGLKTILSFVAPDQRSGKVEVQYFHEHAGISTS 727
            KN NITTD+K+D NSN+ +TIT+DE APGLKTI SFV PDQ+SGKVE+QY HE+AGI+TS
Sbjct: 61   KNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTS 120

Query: 726  IGLAATPLVSFSGVAGSNTVALGTDISFDTASGNFTKYNAALNFSSGDLIASFALNDKFD 547
            IGL A+PLV+FSGVAG+NTVALGTD+SFDTA+GNFTK NA L+FSS DLIAS ALNDK D
Sbjct: 121  IGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGD 180

Query: 546  TLTASYMHTVNPLTNTAVGAELSHCFSSNENTLTIGTQHALDPLTSVKARVNNNGIASAL 367
            T++ASY HTV P+TNTAVGAEL+H FSSNENTLTIGTQH LDPLT+VKARVN+ G ASAL
Sbjct: 181  TVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASAL 240

Query: 366  IQHAWRPKSLFTISGEVDTRAIEKSAKVGLALALKP 259
            IQH WRPKSLFTISGEVDTRAIEKSAK+GLA+ALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276


>emb|CAA56601.1| 36kDa porin I [Solanum tuberosum]
          Length = 276

 Score =  430 bits (1106), Expect = e-118
 Identities = 216/276 (78%), Positives = 244/276 (88%)
 Frame = -3

Query: 1086 MAKGPGLYSDIGKKARDLLYKDYQSHHKFTVSTVAANGLAITPSATKKGESFLADVNAQW 907
            M KGPGLYSDIGKKARDLLY+DY S HKFTV+T +  G+AIT S  KKGE FLADV+ Q 
Sbjct: 1    MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQL 60

Query: 906  KNNNITTDLKLDINSNLCSTITIDELAPGLKTILSFVAPDQRSGKVEVQYFHEHAGISTS 727
            KN NITTD+K+D NSN+ +TIT+DE APGLKTI SFV PDQ+SGKVE+QY HE+AGI+TS
Sbjct: 61   KNKNITTDVKVDANSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTS 120

Query: 726  IGLAATPLVSFSGVAGSNTVALGTDISFDTASGNFTKYNAALNFSSGDLIASFALNDKFD 547
            IGL A+PLV+FSGVAG+NTVALGTD+SFDTA+GNFTK NA L+FSS DLIAS ALNDK D
Sbjct: 121  IGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGD 180

Query: 546  TLTASYMHTVNPLTNTAVGAELSHCFSSNENTLTIGTQHALDPLTSVKARVNNNGIASAL 367
            T++ASY HTV P+TNTAVGAEL+H FSSNENTLTIGTQH LDPLT+VKARVN+ G ASAL
Sbjct: 181  TVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASAL 240

Query: 366  IQHAWRPKSLFTISGEVDTRAIEKSAKVGLALALKP 259
            IQH WRPKSLFTISGEVDTRAIEKSAK+GLA+ALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
            trichocarpa] gi|118484777|gb|ABK94257.1| unknown [Populus
            trichocarpa] gi|222852528|gb|EEE90075.1|
            porin/voltage-dependent anion-selective channel protein
            [Populus trichocarpa]
          Length = 276

 Score =  424 bits (1090), Expect = e-116
 Identities = 212/276 (76%), Positives = 240/276 (86%)
 Frame = -3

Query: 1086 MAKGPGLYSDIGKKARDLLYKDYQSHHKFTVSTVAANGLAITPSATKKGESFLADVNAQW 907
            M KGPGLY DIGKKARDLLYKDYQS HKFTV+T  + G+A+T +  KKGE FLADV+ Q 
Sbjct: 1    MGKGPGLYVDIGKKARDLLYKDYQSDHKFTVTTYTSTGVALTSTGIKKGELFLADVSGQL 60

Query: 906  KNNNITTDLKLDINSNLCSTITIDELAPGLKTILSFVAPDQRSGKVEVQYFHEHAGISTS 727
            KN NITTD+K+D NSNL +TITIDE APGLKTI SF  PDQRSGKVE+QY HE+AGISTS
Sbjct: 61   KNKNITTDIKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTS 120

Query: 726  IGLAATPLVSFSGVAGSNTVALGTDISFDTASGNFTKYNAALNFSSGDLIASFALNDKFD 547
            +GL A P+V+FSGV GSN V+LGTD+SFDTA+GNFTKYNA L++++ DLIAS  +NDK D
Sbjct: 121  LGLTANPIVNFSGVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKGD 180

Query: 546  TLTASYMHTVNPLTNTAVGAELSHCFSSNENTLTIGTQHALDPLTSVKARVNNNGIASAL 367
            TLTASY HTV PLT+TAVGAEL+  FSSNENTLTIGTQHALDPLT+VKAR+NN G ASAL
Sbjct: 181  TLTASYYHTVRPLTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASAL 240

Query: 366  IQHAWRPKSLFTISGEVDTRAIEKSAKVGLALALKP 259
            IQH WRPKSLFTISGEVDT+AIEKSAK+GLALALKP
Sbjct: 241  IQHEWRPKSLFTISGEVDTKAIEKSAKIGLALALKP 276


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