BLASTX nr result

ID: Cnidium21_contig00002069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00002069
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC16734.1| arabinogalactan protein [Daucus carota]               260   9e-68
ref|XP_002274293.2| PREDICTED: pistil-specific extensin-like pro...   165   4e-39
emb|CBI29537.3| unnamed protein product [Vitis vinifera]              165   4e-39
ref|XP_002305791.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
gb|ABK92898.1| unknown [Populus trichocarpa]                          150   1e-34

>emb|CAC16734.1| arabinogalactan protein [Daucus carota]
          Length = 242

 Score =  260 bits (664), Expect = 9e-68
 Identities = 122/127 (96%), Positives = 126/127 (99%)
 Frame = +1

Query: 1   VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFTVKAPKTITTY 180
           VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYF++ APKTITTY
Sbjct: 115 VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFSLNAPKTITTY 174

Query: 181 GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILERSTKPPVSTKTPATFEMFNVGPFAFEP 360
           GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILE+STKPPVSTKTPATFEMF+VGPFAFEP
Sbjct: 175 GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILEKSTKPPVSTKTPATFEMFSVGPFAFEP 234

Query: 361 STKKPCS 381
           STKKPCS
Sbjct: 235 STKKPCS 241


>ref|XP_002274293.2| PREDICTED: pistil-specific extensin-like protein-like [Vitis
           vinifera]
          Length = 187

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/126 (62%), Positives = 95/126 (75%)
 Frame = +1

Query: 1   VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFTVKAPKTITTY 180
           VVYCK C Y G++TLLGA+PLLGA VKLQCNNTKYPLVV GKTDKNGYF ++APK ITT+
Sbjct: 62  VVYCKACKYRGIDTLLGASPLLGATVKLQCNNTKYPLVVLGKTDKNGYFFIQAPKKITTF 121

Query: 181 GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILERSTKPPVSTKTPATFEMFNVGPFAFEP 360
           G HKC+V ++SS    C+  T+L +G+KGAIL R  KPP     P  +  F+VGPFAFEP
Sbjct: 122 GAHKCKVSLISSSSPTCNLATDLHFGLKGAIL-RPEKPPAGL-PPPPYVTFSVGPFAFEP 179

Query: 361 STKKPC 378
           + K  C
Sbjct: 180 AKKVEC 185


>emb|CBI29537.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/126 (62%), Positives = 95/126 (75%)
 Frame = +1

Query: 1   VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFTVKAPKTITTY 180
           VVYCK C Y G++TLLGA+PLLGA VKLQCNNTKYPLVV GKTDKNGYF ++APK ITT+
Sbjct: 34  VVYCKACKYRGIDTLLGASPLLGATVKLQCNNTKYPLVVLGKTDKNGYFFIQAPKKITTF 93

Query: 181 GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILERSTKPPVSTKTPATFEMFNVGPFAFEP 360
           G HKC+V ++SS    C+  T+L +G+KGAIL R  KPP     P  +  F+VGPFAFEP
Sbjct: 94  GAHKCKVSLISSSSPTCNLATDLHFGLKGAIL-RPEKPPAGL-PPPPYVTFSVGPFAFEP 151

Query: 361 STKKPC 378
           + K  C
Sbjct: 152 AKKVEC 157


>ref|XP_002305791.1| predicted protein [Populus trichocarpa] gi|222848755|gb|EEE86302.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/119 (62%), Positives = 87/119 (73%)
 Frame = +1

Query: 1   VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFTVKAPKTITTY 180
           VVYCK CNY+GV+TLLGA P+LGA VKLQCNNT  P  V+  TDKNGYF +KAP TIT Y
Sbjct: 29  VVYCKSCNYSGVDTLLGAKPVLGATVKLQCNNTMKPQDVKTTTDKNGYFLIKAPGTITNY 88

Query: 181 GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILERSTKPPVSTKTPATFEMFNVGPFAFE 357
           GVHKC+V++VS+P   C K TNL  G+ GA+L    KP V  K    F +F+VGPFAFE
Sbjct: 89  GVHKCKVWLVSAPSTACSKITNLHGGLTGAMLRPEKKPFVDEK-KREFALFSVGPFAFE 146


>gb|ABK92898.1| unknown [Populus trichocarpa]
          Length = 234

 Score =  150 bits (378), Expect = 1e-34
 Identities = 74/119 (62%), Positives = 87/119 (73%)
 Frame = +1

Query: 1   VVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFTVKAPKTITTY 180
           VVYCK CNY+GV+TLLGA P+LGA VKLQCNNT  P  V+  TDKNGYF +KAP TIT Y
Sbjct: 112 VVYCKSCNYSGVDTLLGAKPVLGATVKLQCNNTMKPQDVKTTTDKNGYFLIKAPGTITNY 171

Query: 181 GVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILERSTKPPVSTKTPATFEMFNVGPFAFE 357
           GVHKC+V++VS+P   C K TNL  G+ GA+L    KP V  K    F +F+VGPFAFE
Sbjct: 172 GVHKCKVWLVSAPSTACSKITNLHGGLTGAMLRPEKKPFVDEK-KREFALFSVGPFAFE 229


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