BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00041310
         (311 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK78153.1| hypothetical chloroplast RF2 [Cinnamomum camphora]     142   7e-32
gb|AKF01572.1| hypothetical chloroplast RF21 (chloroplast) [Geon...   118   1e-24
ref|YP_009093843.1| Ycf2 (chloroplast) [Luzuriaga radicans] gi|7...   118   1e-24
gb|AEZ48744.1| hypothetical chloroplast RF2 [Lomandra longifolia]     117   2e-24
gb|AHI87572.1| hypothetical chloroplast RF21 (chloroplast) [Chio...   115   1e-23
gb|AGE93346.1| hypothetical chloroplast RF21 [Chamaedorea seifri...   115   1e-23
gb|AEZ48735.1| hypothetical chloroplast RF2, partial [Chamaedore...   115   1e-23
gb|AEZ48731.1| hypothetical chloroplast RF2 [Albuca kirkii]           115   1e-23
gb|AEX93976.1| hypothetical chloroplast RF21 (chloroplast) [Beau...   115   1e-23
gb|AEX93973.1| hypothetical chloroplast RF21 (chloroplast) [Orni...   115   1e-23
gb|AEX93971.1| hypothetical chloroplast RF21 (chloroplast) [Drim...   115   1e-23
gb|AEX93970.1| hypothetical chloroplast RF21 (chloroplast) [Bowi...   115   1e-23
gb|AEX93960.1| hypothetical chloroplast RF21 (chloroplast) [Aphy...   115   1e-23
gb|AEX93957.1| hypothetical chloroplast RF21 (chloroplast) [Crin...   115   1e-23
ref|YP_009143933.1| Ycf2 (plastid) [Cypripedium japonicum] gi|83...   114   3e-23
ref|YP_009129388.1| conserved hypothetical protein ycf2 (chlorop...   114   3e-23
gb|AIR76400.1| hypothetical chloroplast RF2 (chloroplast) [Dendr...   114   3e-23
ref|YP_009048262.1| Ycf2 (chloroplast) [Calanthe triplicata] gi|...   114   3e-23
ref|YP_009026481.1| Ycf2 (chloroplast) [Dendrobium catenatum] gi...   114   3e-23
ref|NP_862797.1| Ycf2 [Calycanthus floridus var. glaucus] gi|324...   113   4e-23

>gb|AEK78153.1| hypothetical chloroplast RF2 [Cinnamomum camphora]
          Length = 2289

 Score =  142 bits (359), Expect = 7e-32
 Identities = 67/68 (98%), Positives = 68/68 (100%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           MRGHQFKSWIFELREI+NSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR
Sbjct: 1   MRGHQFKSWIFELREIQNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 60

Query: 24  DSQGSIRR 1
           DSQGSIRR
Sbjct: 61  DSQGSIRR 68


>gb|AKF01572.1| hypothetical chloroplast RF21 (chloroplast) [Geonoma undata subsp.
           dussiana]
          Length = 2265

 Score =  118 bits (296), Expect = 1e-24
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+GHQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKGHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>ref|YP_009093843.1| Ycf2 (chloroplast) [Luzuriaga radicans]
           gi|712912102|ref|YP_009093860.1| YCF2 (chloroplast)
           [Luzuriaga radicans] gi|695277454|gb|AIT16031.1| Ycf2
           (chloroplast) [Luzuriaga radicans]
           gi|695277471|gb|AIT16048.1| YCF2 (chloroplast)
           [Luzuriaga radicans]
          Length = 2291

 Score =  118 bits (296), Expect = 1e-24
 Identities = 55/65 (84%), Positives = 59/65 (90%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+GHQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKGHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEZ48744.1| hypothetical chloroplast RF2 [Lomandra longifolia]
          Length = 2270

 Score =  117 bits (294), Expect = 2e-24
 Identities = 55/65 (84%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWIQ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHHFLDSWIQFDSVGSFTPIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AHI87572.1| hypothetical chloroplast RF21 (chloroplast) [Chionographis
           japonica] gi|584297243|gb|AHI87589.1| hypothetical
           chloroplast RF21 (chloroplast) [Chionographis japonica]
          Length = 2305

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AGE93346.1| hypothetical chloroplast RF21 [Chamaedorea seifrizii]
          Length = 2277

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEZ48735.1| hypothetical chloroplast RF2, partial [Chamaedorea seifrizii]
           gi|449326748|gb|AGE93327.1| hypothetical chloroplast
           RF21 [Chamaedorea seifrizii]
          Length = 2284

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEZ48731.1| hypothetical chloroplast RF2 [Albuca kirkii]
          Length = 2270

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTPIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEX93976.1| hypothetical chloroplast RF21 (chloroplast) [Beaucarnea hookeri]
          Length = 2238

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEX93973.1| hypothetical chloroplast RF21 (chloroplast) [Ornithogalum
           tenuifolium]
          Length = 2281

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTPIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEX93971.1| hypothetical chloroplast RF21 (chloroplast) [Drimia altissima]
          Length = 2281

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTPIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEX93970.1| hypothetical chloroplast RF21 (chloroplast) [Bowiea volubilis]
          Length = 2276

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTPIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEX93960.1| hypothetical chloroplast RF21 (chloroplast) [Aphyllanthes
           monspeliensis]
          Length = 2271

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTPIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>gb|AEX93957.1| hypothetical chloroplast RF21 (chloroplast) [Crinum asiaticum]
          Length = 2268

 Score =  115 bits (288), Expect = 1e-23
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65


>ref|YP_009143933.1| Ycf2 (plastid) [Cypripedium japonicum]
           gi|836642948|ref|YP_009143950.1| Ycf2 (plastid)
           [Cypripedium japonicum] gi|648933383|gb|AIC37321.1| Ycf2
           [Cypripedium japonicum] gi|648933398|gb|AIC37336.1| Ycf2
           [Cypripedium japonicum]
          Length = 2292

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQG+
Sbjct: 61  DSQGA 65


>ref|YP_009129388.1| conserved hypothetical protein ycf2 (chloroplast) [Cypripedium
           formosanum] gi|810932490|ref|YP_009129406.1| conserved
           hypothetical protein ycf2 (chloroplast) [Cypripedium
           formosanum] gi|632812767|gb|AHZ42997.1| conserved
           hypothetical protein ycf2 (chloroplast) [Cypripedium
           formosanum] gi|632812768|gb|AHZ42998.1| conserved
           hypothetical protein ycf2 (chloroplast) [Cypripedium
           formosanum]
          Length = 2294

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQG+
Sbjct: 61  DSQGA 65


>gb|AIR76400.1| hypothetical chloroplast RF2 (chloroplast) [Dendrobium catenatum]
           gi|691192215|gb|AIR76474.1| hypothetical chloroplast RF2
           (chloroplast) [Dendrobium catenatum]
          Length = 2289

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQG+
Sbjct: 61  DSQGA 65


>ref|YP_009048262.1| Ycf2 (chloroplast) [Calanthe triplicata]
           gi|669100251|ref|YP_009048243.1| Ycf2 (chloroplast)
           [Calanthe triplicata] gi|573015236|gb|AHF71817.1| Ycf2
           (chloroplast) [Calanthe triplicata]
           gi|573015237|gb|AHF71818.1| Ycf2 (chloroplast) [Calanthe
           triplicata]
          Length = 2270

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQG+
Sbjct: 61  DSQGA 65


>ref|YP_009026481.1| Ycf2 (chloroplast) [Dendrobium catenatum]
           gi|618750354|ref|YP_009026491.1| Ycf2 (chloroplast)
           [Dendrobium catenatum] gi|507474363|gb|AGM48239.1| Ycf2
           (chloroplast) [Dendrobium catenatum]
           gi|507474372|gb|AGM48248.1| Ycf2 (chloroplast)
           [Dendrobium catenatum]
          Length = 2289

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/65 (81%), Positives = 58/65 (89%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSWI+ DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWIKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQG+
Sbjct: 61  DSQGA 65


>ref|NP_862797.1| Ycf2 [Calycanthus floridus var. glaucus]
           gi|32480909|ref|NP_862818.1| Ycf2 [Calycanthus floridus
           var. glaucus] gi|47117498|sp|Q7Y667.1|YCF2_CALFG
           RecName: Full=Protein Ycf2 (chloroplast) [Calycanthus
           floridus var. glaucus] gi|32399422|emb|CAD28764.1| Ycf2
           protein [Calycanthus floridus var. glaucus]
           gi|32399445|emb|CAD28786.1| Ycf2 protein [Calycanthus
           floridus var. glaucus]
          Length = 2287

 Score =  113 bits (283), Expect = 4e-23
 Identities = 53/65 (81%), Positives = 57/65 (87%)
 Frame = -3

Query: 204 MRGHQFKSWIFELREIKNSHDFLDSWIQPDSVKSFTSFFFHQERFMKLFDSRIWSVLISR 25
           M+ HQFKSWIFELREIKNSH FLDSW + DSV SFT  FFHQERFMKLFD RIWS+L+SR
Sbjct: 1   MKRHQFKSWIFELREIKNSHYFLDSWTKFDSVGSFTHIFFHQERFMKLFDPRIWSILLSR 60

Query: 24  DSQGS 10
           DSQGS
Sbjct: 61  DSQGS 65