BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00038617
         (442 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV su...   128   1e-27
ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV su...   128   1e-27
ref|XP_008803255.1| PREDICTED: DNA-directed RNA polymerase IV su...   124   3e-26
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   123   4e-26
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   123   5e-26
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   123   5e-26
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   123   5e-26
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   123   5e-26
ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   122   1e-25
ref|XP_010919205.1| PREDICTED: DNA-directed RNA polymerase IV su...   121   2e-25
gb|AIO05698.1| putative DNA-directed RNA polymerase IV subunit 1...   119   8e-25
ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV su...   119   1e-24
ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV su...   119   1e-24
ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV su...   119   1e-24
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   117   3e-24
ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV su...   116   7e-24
ref|XP_011463808.1| PREDICTED: DNA-directed RNA polymerase IV su...   115   9e-24
ref|XP_011463806.1| PREDICTED: DNA-directed RNA polymerase IV su...   115   9e-24
ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV su...   115   9e-24
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   114   3e-23

>ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Nelumbo nucifera]
          Length = 1373

 Score =  128 bits (322), Expect = 1e-27
 Identities = 66/143 (46%), Positives = 95/143 (66%)
 Frame = -3

Query: 434 FWESIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLH 255
           F ES WLR+   ++FS L+ H  ++AIDFLF+AQ++ CEWISM G +VSLSDIY++SD H
Sbjct: 468 FGESSWLRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSH 527

Query: 254 SRMKMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSD 75
           SR  M++EV  GLQE +   YIKQLM    +  LLRY  ++        +       N +
Sbjct: 528 SRKNMLDEVRCGLQEIKKKIYIKQLMVDPEMVHLLRYDGEN--TKTNGYRVDQECPSNQE 585

Query: 74  AVVLSQVAISTFKEFSYDLQNVI 6
           +VVL QV++S+F+E  +D+Q++I
Sbjct: 586 SVVLCQVSVSSFREAFHDIQSLI 608


>ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Nelumbo nucifera]
          Length = 1489

 Score =  128 bits (322), Expect = 1e-27
 Identities = 66/143 (46%), Positives = 95/143 (66%)
 Frame = -3

Query: 434  FWESIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLH 255
            F ES WLR+   ++FS L+ H  ++AIDFLF+AQ++ CEWISM G +VSLSDIY++SD H
Sbjct: 590  FGESSWLRSRAGSIFSVLVDHYQNRAIDFLFAAQDVFCEWISMGGFSVSLSDIYIASDSH 649

Query: 254  SRMKMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSD 75
            SR  M++EV  GLQE +   YIKQLM    +  LLRY  ++        +       N +
Sbjct: 650  SRKNMLDEVRCGLQEIKKKIYIKQLMVDPEMVHLLRYDGEN--TKTNGYRVDQECPSNQE 707

Query: 74   AVVLSQVAISTFKEFSYDLQNVI 6
            +VVL QV++S+F+E  +D+Q++I
Sbjct: 708  SVVLCQVSVSSFREAFHDIQSLI 730


>ref|XP_008803255.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Phoenix
            dactylifera]
          Length = 1567

 Score =  124 bits (310), Expect = 3e-26
 Identities = 68/140 (48%), Positives = 96/140 (68%)
 Frame = -3

Query: 425  SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
            S WL+N+  ++FSS+ K    KA+DFLFSAQE+LCE+++ RGL+VSL D+YLSSDL+SR 
Sbjct: 652  SFWLQNTTSSIFSSMFKCYGRKALDFLFSAQEVLCEYLTTRGLSVSLGDVYLSSDLYSRR 711

Query: 245  KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            KM +EV  GL+EAEDAC+IKQLM    +E LL+        +    +  + + +N   + 
Sbjct: 712  KMTDEVCYGLEEAEDACHIKQLMLDPEMEFLLK-------SHDGTCRNPYNYARNQKHI- 763

Query: 65   LSQVAISTFKEFSYDLQNVI 6
             SQ +I+ F++  YDLQNVI
Sbjct: 764  -SQFSIAAFRDVFYDLQNVI 782


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  123 bits (309), Expect = 4e-26
 Identities = 62/141 (43%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425  SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
            S WLR++  N+F SLIKH   K +DFL++AQE+LCEW+SMRGL+VSLSD+YLSSD +S+ 
Sbjct: 592  STWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSNSQK 651

Query: 245  KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQ-DQLLYVKVPKASHTFDQNSDAV 69
             M++E+  GLQE E  C  KQLM  +N + L+ + ++ D  + + V +  +   +   + 
Sbjct: 652  NMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCY---EKQRSA 708

Query: 68   VLSQVAISTFKEFSYDLQNVI 6
             LSQ ++ +FK+   D+QN++
Sbjct: 709  ALSQASVDSFKQVFRDIQNLL 729


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Vitis vinifera]
          Length = 1354

 Score =  123 bits (308), Expect = 5e-26
 Identities = 65/140 (46%), Positives = 91/140 (65%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+   N+FSSL+K C  KA+DFL++AQE+LCEW+SMRGL+VSLSDIYLSSD  SR 
Sbjct: 472 SAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRK 531

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            MI+EV  GL  AE  C+ KQL+  ++   L+  G+ +Q     VP     + +   +  
Sbjct: 532 NMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQ--NGVVPDVQSLWYERQGSAA 589

Query: 65  LSQVAISTFKEFSYDLQNVI 6
           L Q ++  FK+   D+QN++
Sbjct: 590 LCQSSVCAFKQKFRDIQNLV 609


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Vitis vinifera]
          Length = 1458

 Score =  123 bits (308), Expect = 5e-26
 Identities = 65/140 (46%), Positives = 91/140 (65%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+   N+FSSL+K C  KA+DFL++AQE+LCEW+SMRGL+VSLSDIYLSSD  SR 
Sbjct: 578 SAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRK 637

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            MI+EV  GL  AE  C+ KQL+  ++   L+  G+ +Q     VP     + +   +  
Sbjct: 638 NMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQ--NGVVPDVQSLWYERQGSAA 695

Query: 65  LSQVAISTFKEFSYDLQNVI 6
           L Q ++  FK+   D+QN++
Sbjct: 696 LCQSSVCAFKQKFRDIQNLV 715


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Vitis vinifera]
          Length = 1460

 Score =  123 bits (308), Expect = 5e-26
 Identities = 65/140 (46%), Positives = 91/140 (65%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+   N+FSSL+K C  KA+DFL++AQE+LCEW+SMRGL+VSLSDIYLSSD  SR 
Sbjct: 578 SAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRK 637

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            MI+EV  GL  AE  C+ KQL+  ++   L+  G+ +Q     VP     + +   +  
Sbjct: 638 NMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQ--NGVVPDVQSLWYERQGSAA 695

Query: 65  LSQVAISTFKEFSYDLQNVI 6
           L Q ++  FK+   D+QN++
Sbjct: 696 LCQSSVCAFKQKFRDIQNLV 715


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  123 bits (308), Expect = 5e-26
 Identities = 65/140 (46%), Positives = 91/140 (65%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+   N+FSSL+K C  KA+DFL++AQE+LCEW+SMRGL+VSLSDIYLSSD  SR 
Sbjct: 581 SAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRK 640

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            MI+EV  GL  AE  C+ KQL+  ++   L+  G+ +Q     VP     + +   +  
Sbjct: 641 NMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQ--NGVVPDVQSLWYERQGSAA 698

Query: 65  LSQVAISTFKEFSYDLQNVI 6
           L Q ++  FK+   D+QN++
Sbjct: 699 LCQSSVCAFKQKFRDIQNLV 718


>ref|XP_008448971.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
            subunit 1 [Cucumis melo]
          Length = 1489

 Score =  122 bits (305), Expect = 1e-25
 Identities = 62/141 (43%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425  SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
            S WLR+SG N+F +LI+HC  K +D+L  AQ +LCEW+SMRGL+VSLSD+YLS D +S  
Sbjct: 607  SYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHK 666

Query: 245  KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQ-LLYVKVPKASHTFDQNSDAV 69
             M++++  GLQEAE+ C +KQLM  ++ E L    + +Q LL + V    H   +   + 
Sbjct: 667  NMMDDIFCGLQEAEETCNLKQLMVDSHKEILTGNDEDNQHLLSIAV---EHLIYEKQKSA 723

Query: 68   VLSQVAISTFKEFSYDLQNVI 6
             L+Q ++  FK+   D+QN++
Sbjct: 724  ALNQASVDAFKKVFRDIQNLV 744


>ref|XP_010919205.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Elaeis
            guineensis]
          Length = 1569

 Score =  121 bits (304), Expect = 2e-25
 Identities = 67/141 (47%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425  SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
            S WL+N+  ++FSS+ K    KA+DFLFSAQE+LCE+++ RGL+VSL D+YLSSDL+SR 
Sbjct: 652  SSWLQNTTSSIFSSMFKCYGRKALDFLFSAQEVLCEYLTTRGLSVSLGDVYLSSDLYSRR 711

Query: 245  KMINEVNSGLQEAEDACYIKQLMACNNVEKLLR-YGKQDQLLYVKVPKASHTFDQNSDAV 69
            KM +EV  GL+EAEDAC+IKQ+M    +E L + +    + LY       H         
Sbjct: 712  KMTDEVFYGLEEAEDACHIKQIMLDPEMEFLFKSHDGTYRNLYNYARNRKH--------- 762

Query: 68   VLSQVAISTFKEFSYDLQNVI 6
             +SQ +++ F++  YDLQNVI
Sbjct: 763  -ISQFSVAAFRDVFYDLQNVI 782


>gb|AIO05698.1| putative DNA-directed RNA polymerase IV subunit 1, partial [Cocos
           nucifera]
          Length = 568

 Score =  119 bits (298), Expect = 8e-25
 Identities = 67/141 (47%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WL+N+  ++FSS+ K    KA+DFLFSAQE+LCE+++ RGL+VSL D+YLSSDL+SR 
Sbjct: 131 SSWLQNTTSSIFSSMFKCYGRKALDFLFSAQEVLCEYLTARGLSVSLGDVYLSSDLYSRR 190

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLR-YGKQDQLLYVKVPKASHTFDQNSDAV 69
           KM +EV  GL+EAEDAC+IK+LM    +E L + +    + LY       H         
Sbjct: 191 KMTDEVFYGLEEAEDACHIKELMLDPEMEFLFKSHDGTYRNLYNYARNQKH--------- 241

Query: 68  VLSQVAISTFKEFSYDLQNVI 6
            +S  +I+ F++  YDLQNVI
Sbjct: 242 -ISPFSIAAFRDVFYDLQNVI 261


>ref|XP_011650451.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
           [Cucumis sativus]
          Length = 1361

 Score =  119 bits (297), Expect = 1e-24
 Identities = 60/141 (42%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+SG N+F +LI+HC  K +D+L  AQ +LCEW+S RGL+VSLSD+YLS D +S  
Sbjct: 481 SYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHE 540

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQ-LLYVKVPKASHTFDQNSDAV 69
            M++++  GLQEAE+ C +KQLM  ++ E L+   + +Q LL + V +  +   +   + 
Sbjct: 541 NMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIY---EKQKSA 597

Query: 68  VLSQVAISTFKEFSYDLQNVI 6
            L+Q ++  FK+   D+QN++
Sbjct: 598 ALNQASVDAFKKVFRDIQNLV 618


>ref|XP_011650450.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Cucumis sativus]
          Length = 1362

 Score =  119 bits (297), Expect = 1e-24
 Identities = 60/141 (42%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+SG N+F +LI+HC  K +D+L  AQ +LCEW+S RGL+VSLSD+YLS D +S  
Sbjct: 482 SYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHE 541

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQ-LLYVKVPKASHTFDQNSDAV 69
            M++++  GLQEAE+ C +KQLM  ++ E L+   + +Q LL + V +  +   +   + 
Sbjct: 542 NMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIY---EKQKSA 598

Query: 68  VLSQVAISTFKEFSYDLQNVI 6
            L+Q ++  FK+   D+QN++
Sbjct: 599 ALNQASVDAFKKVFRDIQNLV 619


>ref|XP_011650447.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
            [Cucumis sativus] gi|778675671|ref|XP_011650448.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1
            isoform X1 [Cucumis sativus]
            gi|778675673|ref|XP_011650449.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1 isoform X1 [Cucumis sativus]
            gi|700200830|gb|KGN55963.1| hypothetical protein
            Csa_3G039340 [Cucumis sativus]
          Length = 1483

 Score =  119 bits (297), Expect = 1e-24
 Identities = 60/141 (42%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425  SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
            S WLR+SG N+F +LI+HC  K +D+L  AQ +LCEW+S RGL+VSLSD+YLS D +S  
Sbjct: 603  SYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSYSHE 662

Query: 245  KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQ-LLYVKVPKASHTFDQNSDAV 69
             M++++  GLQEAE+ C +KQLM  ++ E L+   + +Q LL + V +  +   +   + 
Sbjct: 663  NMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIY---EKQKSA 719

Query: 68   VLSQVAISTFKEFSYDLQNVI 6
             L+Q ++  FK+   D+QN++
Sbjct: 720  ALNQASVDAFKKVFRDIQNLV 740


>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
           subunit 1 [Prunus mume]
          Length = 1452

 Score =  117 bits (293), Expect = 3e-24
 Identities = 62/145 (42%), Positives = 91/145 (62%), Gaps = 6/145 (4%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR++G N+F SL+ H   + +DFLF+AQE+LCEW+SMRGL+VSL+D+YL+SD  SR 
Sbjct: 571 SSWLRDTGGNLFQSLVNHFQGQVLDFLFAAQEVLCEWLSMRGLSVSLADLYLASDSGSRN 630

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFD------Q 84
            ++ E++ GLQEAE AC  KQL+  N  E L+   +++        ++  TFD      +
Sbjct: 631 NLMEEISCGLQEAEQACIFKQLLVDNCQEFLMGCAEEN--------RSPLTFDAEYFCHE 682

Query: 83  NSDAVVLSQVAISTFKEFSYDLQNV 9
              +  LSQV    FK    D+Q++
Sbjct: 683 KQKSAALSQVVHDAFKHIFRDIQSL 707


>ref|XP_009377912.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Pyrus x
           bretschneideri] gi|694406181|ref|XP_009377913.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1
           [Pyrus x bretschneideri]
          Length = 1466

 Score =  116 bits (290), Expect = 7e-24
 Identities = 58/139 (41%), Positives = 87/139 (62%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR++  N++ SL+KHC    +D L +AQE+ CEW+SMRGLTVSLSD+YL+SD  SR 
Sbjct: 581 SSWLRDTSGNLYQSLVKHCQGPVLDILHAAQEVFCEWLSMRGLTVSLSDLYLASDSCSRN 640

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            ++ E+  GL+EAE AC  +QL+  ++ E L+   +++Q          +   +   +  
Sbjct: 641 NLMEEIFCGLREAEQACIFRQLLVDSSRELLMGCAEENQSPVTS--DVDYFCHEKQKSAA 698

Query: 65  LSQVAISTFKEFSYDLQNV 9
           LSQV    FK+F  D+QN+
Sbjct: 699 LSQVVHDAFKQFFRDIQNL 717


>ref|XP_011463808.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 1314

 Score =  115 bits (289), Expect = 9e-24
 Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR++  N+F SL +HC  + +D  FSAQ +LCEW+SMRGL+VSLSD+YL+SD  SR 
Sbjct: 439 SSWLRDTSGNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTCSRK 498

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGK---QDQLLYVKVPKASHTFDQNSD 75
            ++ E+  GLQEAE+AC I+QLM  +  + L+ Y +   Q  L +     + H   Q   
Sbjct: 499 NLMEEIFYGLQEAEEACTIRQLMLDSFQDFLMGYDENKSQSPLTF----GSEHFCYQKQK 554

Query: 74  AVVLSQVAISTFKEFSYDLQNV 9
              LSQV +   KE   D+QN+
Sbjct: 555 TAALSQVTVDAIKEGFRDVQNL 576


>ref|XP_011463806.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
           [Fragaria vesca subsp. vesca]
           gi|764580245|ref|XP_011463807.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1 isoform X1 [Fragaria vesca
           subsp. vesca]
          Length = 1444

 Score =  115 bits (289), Expect = 9e-24
 Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR++  N+F SL +HC  + +D  FSAQ +LCEW+SMRGL+VSLSD+YL+SD  SR 
Sbjct: 569 SSWLRDTSGNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTCSRK 628

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGK---QDQLLYVKVPKASHTFDQNSD 75
            ++ E+  GLQEAE+AC I+QLM  +  + L+ Y +   Q  L +     + H   Q   
Sbjct: 629 NLMEEIFYGLQEAEEACTIRQLMLDSFQDFLMGYDENKSQSPLTF----GSEHFCYQKQK 684

Query: 74  AVVLSQVAISTFKEFSYDLQNV 9
              LSQV +   KE   D+QN+
Sbjct: 685 TAALSQVTVDAIKEGFRDVQNL 706


>ref|XP_008358315.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Malus
           domestica]
          Length = 1287

 Score =  115 bits (289), Expect = 9e-24
 Identities = 59/139 (42%), Positives = 86/139 (61%)
 Frame = -3

Query: 425 SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
           S WLR+   N++ SLIKHC    +D L +AQE+ CEW+SMRGLTVSLSD+YL+SD  SR 
Sbjct: 560 SSWLRDMSGNLYQSLIKHCQGPVLDILHAAQEVFCEWLSMRGLTVSLSDLYLASDSCSRN 619

Query: 245 KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
            ++ E+  GL+EAE AC  +QL+  ++ E L+   +++Q          +   +   +  
Sbjct: 620 NLMEEIFCGLREAEQACIFRQLLVDSSRELLMGCAEENQSPVTS--DVDYFCHEKQKSAA 677

Query: 65  LSQVAISTFKEFSYDLQNV 9
           LSQV    FK+F  D+QN+
Sbjct: 678 LSQVVHDAFKQFFRDIQNL 696


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Gossypium raimondii]
          Length = 1300

 Score =  114 bits (284), Expect = 3e-23
 Identities = 59/140 (42%), Positives = 90/140 (64%)
 Frame = -3

Query: 425  SIWLRNSGDNVFSSLIKHCPSKAIDFLFSAQELLCEWISMRGLTVSLSDIYLSSDLHSRM 246
            S WLR++  N+F SLIKH   K +DFL +AQE+LCEW+SMRGL+VSL D+YLS D  S+ 
Sbjct: 592  SSWLRDADGNLFQSLIKHYQGKVLDFLHAAQEVLCEWLSMRGLSVSLLDLYLSPDTDSQK 651

Query: 245  KMINEVNSGLQEAEDACYIKQLMACNNVEKLLRYGKQDQLLYVKVPKASHTFDQNSDAVV 66
             M++E+  GLQEAE  C  KQLM  ++ +  L    ++   ++ +      +++   A  
Sbjct: 652  NMMDEIFYGLQEAEQTCNFKQLMV-DSCQDFLAGNDEETNRFMVLDVEQMCYEKQRSA-A 709

Query: 65   LSQVAISTFKEFSYDLQNVI 6
            LSQ ++ +FK+   D+QN++
Sbjct: 710  LSQASVDSFKQVFRDIQNLL 729