BLASTX nr result

ID: Cinnamomum25_contig00035943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00035943
         (333 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78955.1| hypothetical protein (mitochondrion) [Vicia faba]      120   5e-25
ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medica...   113   3e-24
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    77   3e-12
gb|ERM95897.1| hypothetical protein AMTR_s00060p00157630 [Ambore...    60   7e-07

>gb|AGC78955.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 104

 Score =  120 bits (300), Expect = 5e-25
 Identities = 59/70 (84%), Positives = 61/70 (87%)
 Frame = -2

Query: 332 RERKRTGGATMHGTSRPCLRRTVERATHECCRVGRANNSNAFAQFFEQESQRYLTFTMIR 153
           RE++RTGG   H  SRPCLR TVERATHECCRVGRANNSNAF  FFEQESQRYLTFTMIR
Sbjct: 36  REQERTGGN--HACSRPCLRGTVERATHECCRVGRANNSNAFGLFFEQESQRYLTFTMIR 93

Query: 152 TPSSYGRARG 123
           TPS YGRARG
Sbjct: 94  TPSYYGRARG 103


>ref|XP_003588265.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|657370786|gb|KEH16847.1| NADH-quinone oxidoreductase
           protein [Medicago truncatula]
          Length = 346

 Score =  113 bits (282), Expect(2) = 3e-24
 Identities = 58/74 (78%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = -2

Query: 332 RERKRTGGATMHGTSRPCLRRTVERATHECCRVGRANNSNAFAQFFEQESQRYLTFTMIR 153
           RE++RTGG   H  SRPCLR TVERATHECCRVGRANNSNAF  FFEQESQRYLTFTMIR
Sbjct: 238 REQERTGGN--HACSRPCLRGTVERATHECCRVGRANNSNAFGLFFEQESQRYLTFTMIR 295

Query: 152 TPSSY-GRARGVSN 114
           TPSSY  R  GV +
Sbjct: 296 TPSSYEARPTGVQD 309



 Score = 25.0 bits (53), Expect(2) = 3e-24
 Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 1/16 (6%)
 Frame = -3

Query: 46  TFSNS-NVSMRVFGST 2
           T SNS NVSMR+FGST
Sbjct: 312 TISNSSNVSMRLFGST 327


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 47/104 (45%), Positives = 53/104 (50%)
 Frame = +2

Query: 2   GTTKNSHAYVTVTKCKYYLGPRRPQSCFWFPFPSSY*SWKLLVLCHKNLESVSW*R*GNA 181
           GTTK SHAYVTVT                            ++L H++    S       
Sbjct: 216 GTTKKSHAYVTVTD-------------------------GFIILDHEDAGRAS------- 243

Query: 182 VILAQKTERTRSSYWLVQPGSIHESLVQLSFGDTVEKCHAWSPP 313
                  +RTRSSYWLV+PGSIHESLVQLS GDTVEK HAW PP
Sbjct: 244 -------DRTRSSYWLVRPGSIHESLVQLSLGDTVEKYHAWLPP 280


>gb|ERM95897.1| hypothetical protein AMTR_s00060p00157630 [Amborella trichopoda]
          Length = 170

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 29/43 (67%), Positives = 33/43 (76%)
 Frame = -3

Query: 298 MALLDRVSEGQLNERLMNAAGLDEPITRTRSLSFLSKNHSVTL 170
           MALLD +SEGQLNERLMNA G DEPITRTRS+  +  N  + L
Sbjct: 1   MALLDPISEGQLNERLMNATGSDEPITRTRSVKKIQSNRDLRL 43


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