BLASTX nr result

ID: Cinnamomum25_contig00035555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00035555
         (244 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007208074.1| hypothetical protein PRUPE_ppa001655mg [Prun...    61   3e-07
ref|XP_007208073.1| hypothetical protein PRUPE_ppa001655mg [Prun...    61   3e-07
ref|XP_008384371.1| PREDICTED: pumilio homolog 12 [Malus domesti...    60   6e-07
ref|XP_008221961.1| PREDICTED: pumilio homolog 12 [Prunus mume]        59   1e-06
ref|XP_008363338.1| PREDICTED: pumilio homolog 12-like, partial ...    59   1e-06
ref|XP_009339193.1| PREDICTED: pumilio homolog 12-like [Pyrus x ...    58   2e-06

>ref|XP_007208074.1| hypothetical protein PRUPE_ppa001655mg [Prunus persica]
           gi|462403716|gb|EMJ09273.1| hypothetical protein
           PRUPE_ppa001655mg [Prunus persica]
          Length = 784

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 TSPTLSVTDFQGVQVFDRRAKHIFPEKFLTR----NSLKAITPNFIEEFELLNHVNSKGQ 21
           ++P LS TD  G+QVFD+  K  FPEK LTR    N+LKA+    +   E L HV+  G+
Sbjct: 342 SNPALSYTDLNGIQVFDKVGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGK 401

Query: 20  VFSNGH 3
           V SNGH
Sbjct: 402 VLSNGH 407


>ref|XP_007208073.1| hypothetical protein PRUPE_ppa001655mg [Prunus persica]
           gi|462403715|gb|EMJ09272.1| hypothetical protein
           PRUPE_ppa001655mg [Prunus persica]
          Length = 783

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 TSPTLSVTDFQGVQVFDRRAKHIFPEKFLTR----NSLKAITPNFIEEFELLNHVNSKGQ 21
           ++P LS TD  G+QVFD+  K  FPEK LTR    N+LKA+    +   E L HV+  G+
Sbjct: 342 SNPALSYTDLNGIQVFDKVGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGK 401

Query: 20  VFSNGH 3
           V SNGH
Sbjct: 402 VLSNGH 407


>ref|XP_008384371.1| PREDICTED: pumilio homolog 12 [Malus domestica]
           gi|657984554|ref|XP_008384372.1| PREDICTED: pumilio
           homolog 12 [Malus domestica]
           gi|657984556|ref|XP_008384373.1| PREDICTED: pumilio
           homolog 12 [Malus domestica]
           gi|657984558|ref|XP_008384374.1| PREDICTED: pumilio
           homolog 12 [Malus domestica]
          Length = 776

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 TSPTLSVTDFQGVQVFDRRAKHIFPEKFLTR----NSLKAITPNFIEEFELLNHVNSKGQ 21
           ++P LS TDF  VQV D+  K  FPEK LTR    N+LKA+    +   E L H++  G+
Sbjct: 335 SNPALSYTDFNRVQVLDKLGKQSFPEKILTRSQGMNTLKAVKXGAVGTDESLTHISQNGK 394

Query: 20  VFSNGH 3
           V SNGH
Sbjct: 395 VVSNGH 400


>ref|XP_008221961.1| PREDICTED: pumilio homolog 12 [Prunus mume]
          Length = 782

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 TSPTLSVTDFQGVQVFDRRAKHIFPEKFLTR----NSLKAITPNFIEEFELLNHVNSKGQ 21
           ++P LS TDF G+QVFD+  K  FPEK LTR    N+LKA+    +   E L HV++ G+
Sbjct: 342 SNPALSYTDFNGIQVFDKVGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVHN-GK 400

Query: 20  VFSNGH 3
           V SNGH
Sbjct: 401 VLSNGH 406


>ref|XP_008363338.1| PREDICTED: pumilio homolog 12-like, partial [Malus domestica]
          Length = 514

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 TSPTLSVTDFQGVQVFDRRAKHIFPEKFLTR----NSLKAITPNFIEEFELLNHVNSKGQ 21
           ++P LS TDF G+QV D+  K  FPEK LTR    N+LKA+    I   E L HV+  G+
Sbjct: 339 SNPALSYTDFNGIQVLDKVGKQSFPEKILTRSHGMNTLKAVKFGXIGTDEPLTHVSQNGK 398

Query: 20  VFSNGH 3
              NGH
Sbjct: 399 ALPNGH 404


>ref|XP_009339193.1| PREDICTED: pumilio homolog 12-like [Pyrus x bretschneideri]
           gi|694422738|ref|XP_009339194.1| PREDICTED: pumilio
           homolog 12-like [Pyrus x bretschneideri]
          Length = 779

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 TSPTLSVTDFQGVQVFDRRAKHIFPEKFLTR----NSLKAITPNFIEEFELLNHVNSKGQ 21
           ++P LS TDF GVQ  D+  K  FP+K LTR    N+LKA+    +   E L H++  G+
Sbjct: 338 SNPALSYTDFNGVQFLDKVGKQSFPKKILTRSQGMNTLKAVRFGSVGTDESLTHISQNGK 397

Query: 20  VFSNGH 3
           V SNGH
Sbjct: 398 VVSNGH 403


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