BLASTX nr result

ID: Cinnamomum25_contig00035362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00035362
         (261 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                58   3e-06

>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = +3

Query: 9   YYVPFIDNYCH-TSIEMMKSRSQLHSIYNILLPWSIHTF--PNKRFCPDSGGRNLSSNFQ 179
           Y+V FID+Y   T + +MK RS+L SI+        + F    + F  D+    LSS FQ
Sbjct: 322 YFVSFIDDYSRCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFQ 381

Query: 180 KTLKAQRIIHETPHPYTTQQNGGSKRK 260
           + +  Q IIH+T  PYT QQNG ++RK
Sbjct: 382 EFMSHQGIIHQTSCPYTPQQNGVAERK 408


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