BLASTX nr result
ID: Cinnamomum25_contig00035013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00035013
(488 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007016194.1| RNA-binding family protein isoform 1 [Theobr... 54 4e-08
ref|XP_007040292.1| RNA-binding family protein [Theobroma cacao]... 48 2e-07
emb|CDP09143.1| unnamed protein product [Coffea canephora] 49 2e-07
ref|XP_012086855.1| PREDICTED: serine/arginine-rich splicing fac... 48 2e-07
ref|XP_012439698.1| PREDICTED: serine/arginine-rich splicing fac... 47 3e-07
ref|XP_010475491.1| PREDICTED: serine/arginine-rich splicing fac... 44 1e-06
ref|XP_010475492.1| PREDICTED: serine/arginine-rich splicing fac... 44 1e-06
ref|XP_010255285.1| PREDICTED: serine/arginine-rich splicing fac... 47 1e-06
ref|XP_004966485.1| PREDICTED: serine/arginine-rich splicing fac... 45 2e-06
ref|XP_006657354.1| PREDICTED: transformer-2 protein homolog bet... 44 4e-06
gb|EEE66378.1| hypothetical protein OsJ_22698 [Oryza sativa Japo... 44 4e-06
ref|XP_006659363.1| PREDICTED: serine/arginine-rich splicing fac... 42 4e-06
gb|EEC81329.1| hypothetical protein OsI_24503 [Oryza sativa Indi... 44 4e-06
dbj|BAD61690.1| putative transformer-SR ribonucleoprotein [Oryza... 44 4e-06
gb|ADE75667.1| unknown [Picea sitchensis] 45 4e-06
ref|XP_012068358.1| PREDICTED: serine/arginine-rich splicing fac... 57 5e-06
ref|XP_012068351.1| PREDICTED: serine/arginine-rich splicing fac... 57 5e-06
ref|XP_009150254.1| PREDICTED: serine/arginine-rich splicing fac... 44 5e-06
ref|XP_012471218.1| PREDICTED: serine/arginine-rich splicing fac... 57 6e-06
>ref|XP_007016194.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508786557|gb|EOY33813.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 390
Score = 53.5 bits (127), Expect(2) = 4e-08
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +2
Query: 260 ERGL*SSIEVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAM 430
E+ S V+D H+V+ +T RES GFGFVTMAT A+ +KYLNRSV EGR +
Sbjct: 63 EKHFASEGNVIDVHLVVDPWT--RESRGFGFVTMATNEEAERCIKYLNRSVLEGRVI 117
Score = 30.4 bits (67), Expect(2) = 4e-08
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 433 EKSRRQRGRTPTPGWYCG 486
++++R+RGRTPTPG Y G
Sbjct: 125 QQAKRRRGRTPTPGRYLG 142
>ref|XP_007040292.1| RNA-binding family protein [Theobroma cacao]
gi|508777537|gb|EOY24793.1| RNA-binding family protein
[Theobroma cacao]
Length = 200
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Frame = +2
Query: 284 EVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAML-----RSRG 445
+VV+ H+V T RES GF FVTM TV A+ +KYLNRSV EGR + RSRG
Sbjct: 68 KVVECHLVTDPRT--RESRGFAFVTMETVEGAERCIKYLNRSVLEGRLITVEKAKRSRG 124
Score = 33.5 bits (75), Expect(2) = 2e-07
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEK++R RGRTPTPG Y G
Sbjct: 116 VEKAKRSRGRTPTPGRYHG 134
>emb|CDP09143.1| unnamed protein product [Coffea canephora]
Length = 363
Score = 48.5 bits (114), Expect(2) = 2e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +2
Query: 287 VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAM 430
V D H+VI ++ RES GFGFVTMA+V A +KYLN SV EGR +
Sbjct: 71 VEDVHLVIDPWS--RESRGFGFVTMASVKEADRCIKYLNHSVLEGRVI 116
Score = 32.7 bits (73), Expect(2) = 2e-07
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 409 CI*RASYVEKSRRQRGRTPTPGWYCG 486
C+ + +++RR+RGRTPTPG Y G
Sbjct: 128 CVKYQTLNQRARRRRGRTPTPGRYLG 153
>ref|XP_012086855.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like
[Jatropha curcas] gi|802738085|ref|XP_012086856.1|
PREDICTED: serine/arginine-rich splicing factor
SR45a-like [Jatropha curcas] gi|643711980|gb|KDP25408.1|
hypothetical protein JCGZ_20564 [Jatropha curcas]
Length = 205
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Frame = +2
Query: 230 GSLLHLSQVSERGL*SSIE--------VVDRHVVIGSYTITRESSGFGFVTMATVGVAKD 385
G+ L+++ +S R S +E V++ H+V T RES GF FVTM TV A+
Sbjct: 47 GNNLYVTGLSTRVTTSDLEKYFGKEGKVLECHLVTDPRT--RESRGFAFVTMETVEDAER 104
Query: 386 WLKYLNRSVFEGRAML-----RSRG 445
+KYLNRSV EGR + RSRG
Sbjct: 105 CIKYLNRSVLEGRLITVEKAKRSRG 129
Score = 33.5 bits (75), Expect(2) = 2e-07
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEK++R RGRTPTPG Y G
Sbjct: 121 VEKAKRSRGRTPTPGRYQG 139
>ref|XP_012439698.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like
[Gossypium raimondii] gi|763785035|gb|KJB52106.1|
hypothetical protein B456_008G248300 [Gossypium
raimondii] gi|763785036|gb|KJB52107.1| hypothetical
protein B456_008G248300 [Gossypium raimondii]
gi|763785038|gb|KJB52109.1| hypothetical protein
B456_008G248300 [Gossypium raimondii]
Length = 197
Score = 47.4 bits (111), Expect(2) = 3e-07
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Frame = +2
Query: 284 EVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAML-----RSRG 445
+V++ H+V +T +ES GF FVTM TV A+ +KYLNRSV EGR + RSRG
Sbjct: 65 KVLECHLVTDPHT--KESRGFAFVTMETVEGAERCIKYLNRSVLEGRLITVEKAKRSRG 121
Score = 33.5 bits (75), Expect(2) = 3e-07
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEK++R RGRTPTPG Y G
Sbjct: 113 VEKAKRSRGRTPTPGRYQG 131
>ref|XP_010475491.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform
X1 [Camelina sativa]
Length = 332
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 284 EVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAM 430
+V D H+V+ +T RES GFGF+++ TVG A ++YL+ SV GR +
Sbjct: 70 KVTDVHLVLDPWT--RESRGFGFISLETVGDANRCIRYLDHSVLLGRVI 116
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 418 RASYVEKSRRQRGRTPTPGWYCG 486
R VEK+RR RGRTPTPG Y G
Sbjct: 114 RVIKVEKARRGRGRTPTPGKYLG 136
>ref|XP_010475492.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform
X2 [Camelina sativa]
Length = 330
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 284 EVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAM 430
+V D H+V+ +T RES GFGF+++ TVG A ++YL+ SV GR +
Sbjct: 70 KVTDVHLVLDPWT--RESRGFGFISLETVGDANRCIRYLDHSVLLGRVI 116
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 418 RASYVEKSRRQRGRTPTPGWYCG 486
R VEK+RR RGRTPTPG Y G
Sbjct: 114 RVIKVEKARRGRGRTPTPGKYLG 136
>ref|XP_010255285.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like [Nelumbo
nucifera]
Length = 206
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Frame = +2
Query: 284 EVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAML-----RSRG 445
+VV+ H+V T RES GFGFVTM T+ A +KYL+RSV EGR + RSRG
Sbjct: 74 KVVECHLVTDPRT--RESRGFGFVTMETLEDADRCIKYLDRSVLEGRLITVQKAKRSRG 130
Score = 32.3 bits (72), Expect(2) = 1e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
V+K++R RGRTPTPG Y G
Sbjct: 122 VQKAKRSRGRTPTPGRYHG 140
>ref|XP_004966485.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like [Setaria
italica]
Length = 274
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +2
Query: 287 VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGR--AMLRSRGGK 451
VV HVV+ +T R S GF FVTM TV A+ +KYLN SV EGR + +SR G+
Sbjct: 90 VVGCHVVLEPHT--RVSRGFAFVTMDTVEEAERCIKYLNNSVMEGRNITVEKSRRGR 144
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEKSRR R RTPTPG Y G
Sbjct: 137 VEKSRRGRPRTPTPGSYLG 155
>ref|XP_006657354.1| PREDICTED: transformer-2 protein homolog beta-like [Oryza
brachyantha]
Length = 342
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Frame = +2
Query: 248 SQVSERGL*SSIE----VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVF 415
S+V+ER L V HVV+ +T R S GF FVTM TV A+ +KYLN+SV
Sbjct: 144 SRVTERELKDYFSKEGRVASCHVVLEPHT--RVSRGFAFVTMDTVEDAERCIKYLNQSVM 201
Query: 416 EGR--AMLRSRGGK 451
EGR + +SR G+
Sbjct: 202 EGRNITVEKSRRGR 215
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEKSRR R RTPTPG Y G
Sbjct: 208 VEKSRRGRPRTPTPGSYLG 226
>gb|EEE66378.1| hypothetical protein OsJ_22698 [Oryza sativa Japonica Group]
Length = 284
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Frame = +2
Query: 248 SQVSERGL*SSIE----VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVF 415
S+V+ER L V HVV+ +T R S GF FVTM TV A+ +KYLN+SV
Sbjct: 85 SRVTERELKDYFSKEGRVTSCHVVLEPHT--RVSRGFAFVTMDTVEDAERCIKYLNQSVM 142
Query: 416 EGR--AMLRSRGGK 451
EGR + +SR G+
Sbjct: 143 EGRNITVEKSRRGR 156
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEKSRR R RTPTPG Y G
Sbjct: 149 VEKSRRGRPRTPTPGSYLG 167
>ref|XP_006659363.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
[Oryza brachyantha]
Length = 277
Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 299 HVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGR 424
HVV+ T +ES GF FVTM TV A+ +KYL+R+V EGR
Sbjct: 119 HVVLDPRT--KESRGFAFVTMDTVDDARRCIKYLHRTVLEGR 158
Score = 34.7 bits (78), Expect(2) = 4e-06
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEK++R R RTPTPG YCG
Sbjct: 162 VEKAKRTRERTPTPGKYCG 180
>gb|EEC81329.1| hypothetical protein OsI_24503 [Oryza sativa Indica Group]
Length = 273
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Frame = +2
Query: 248 SQVSERGL*SSIE----VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVF 415
S+V+ER L V HVV+ +T R S GF FVTM TV A+ +KYLN+SV
Sbjct: 74 SRVTERELKDYFSKEGRVTSCHVVLEPHT--RVSRGFAFVTMDTVEDAERCIKYLNQSVM 131
Query: 416 EGR--AMLRSRGGK 451
EGR + +SR G+
Sbjct: 132 EGRNITVEKSRRGR 145
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEKSRR R RTPTPG Y G
Sbjct: 138 VEKSRRGRPRTPTPGSYLG 156
>dbj|BAD61690.1| putative transformer-SR ribonucleoprotein [Oryza sativa Japonica
Group] gi|54291611|dbj|BAD62534.1| putative
transformer-SR ribonucleoprotein [Oryza sativa Japonica
Group] gi|215737009|dbj|BAG95938.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 273
Score = 44.3 bits (103), Expect(2) = 4e-06
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Frame = +2
Query: 248 SQVSERGL*SSIE----VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVF 415
S+V+ER L V HVV+ +T R S GF FVTM TV A+ +KYLN+SV
Sbjct: 74 SRVTERELKDYFSKEGRVTSCHVVLEPHT--RVSRGFAFVTMDTVEDAERCIKYLNQSVM 131
Query: 416 EGR--AMLRSRGGK 451
EGR + +SR G+
Sbjct: 132 EGRNITVEKSRRGR 145
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEKSRR R RTPTPG Y G
Sbjct: 138 VEKSRRGRPRTPTPGSYLG 156
>gb|ADE75667.1| unknown [Picea sitchensis]
Length = 216
Score = 44.7 bits (104), Expect(2) = 4e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Frame = +2
Query: 230 GSLLHLSQVSERGL*SSIE--------VVDRHVVIGSYTITRESSGFGFVTMATVGVAKD 385
G+ L+++ +S R + + +E VVD +V+ + RES GFGFVTM T+ A
Sbjct: 62 GNNLYVTGLSARVVEADLEELFSQEGKVVDCRIVVDPRS--RESRGFGFVTMDTLENADR 119
Query: 386 WLKYLNRSVFEGR 424
+KYLNRS EGR
Sbjct: 120 CVKYLNRSTLEGR 132
Score = 32.3 bits (72), Expect(2) = 4e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VEK++R+R RTPTPG Y G
Sbjct: 136 VEKAKRKRARTPTPGSYLG 154
>ref|XP_012068358.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform
X2 [Jatropha curcas]
Length = 373
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +2
Query: 287 VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAMLRSRGGKEDGHQ 466
VVD H+V+ +T RES GFGFVTM++VG A +KYLNRSV EGR + + + G
Sbjct: 79 VVDVHLVVDPWT--RESRGFGFVTMSSVGEADRCIKYLNRSVLEGRVITVEKAKRRRGRT 136
Query: 467 HLAG 478
G
Sbjct: 137 PTPG 140
>ref|XP_012068351.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like isoform
X1 [Jatropha curcas] gi|643740989|gb|KDP46559.1|
hypothetical protein JCGZ_08531 [Jatropha curcas]
Length = 372
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +2
Query: 287 VVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAMLRSRGGKEDGHQ 466
VVD H+V+ +T RES GFGFVTM++VG A +KYLNRSV EGR + + + G
Sbjct: 78 VVDVHLVVDPWT--RESRGFGFVTMSSVGEADRCIKYLNRSVLEGRVITVEKAKRRRGRT 135
Query: 467 HLAG 478
G
Sbjct: 136 PTPG 139
>ref|XP_009150254.1| PREDICTED: serine/arginine-rich splicing factor SR45a-like
[Brassica rapa]
Length = 221
Score = 43.5 bits (101), Expect(2) = 5e-06
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2
Query: 326 TRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAMLRSRGGKE 454
TRES GF FVTM TV A +KYLN+SV EGR + R ++
Sbjct: 104 TRESRGFAFVTMDTVKDADRCIKYLNQSVLEGRYITVERSRRK 146
Score = 33.1 bits (74), Expect(2) = 5e-06
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 430 VEKSRRQRGRTPTPGWYCG 486
VE+SRR+R RTPTPG Y G
Sbjct: 140 VERSRRKRPRTPTPGHYLG 158
>ref|XP_012471218.1| PREDICTED: serine/arginine-rich splicing factor SR45a isoform X1
[Gossypium raimondii] gi|763753859|gb|KJB21247.1|
hypothetical protein B456_003G125000 [Gossypium
raimondii]
Length = 388
Score = 56.6 bits (135), Expect = 6e-06
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +2
Query: 260 ERGL*SSIEVVDRHVVIGSYTITRESSGFGFVTMATVGVAKDWLKYLNRSVFEGRAMLRS 439
E+ S +VVD H+V+ +T RES GFGFVTM+T+ A+ +KYLNRSV EGR +
Sbjct: 59 EKHFSSEGKVVDVHLVVDPWT--RESRGFGFVTMSTIEEAERCIKYLNRSVLEGRVITVE 116
Query: 440 RGGKEDGHQHLAG 478
+ + G G
Sbjct: 117 KAKRRRGRTPTPG 129