BLASTX nr result
ID: Cinnamomum25_contig00034207
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00034207
(281 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB73912.1| polyprotein [Citrus sinensis] 103 2e-20
gb|AFB73911.1| polyprotein [Citrus sinensis] 101 7e-20
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 101 9e-20
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 100 2e-19
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 100 2e-19
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 100 2e-19
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 99 3e-19
gb|KMQ82579.1| retrovirus-related pol polyprotein from transposo... 99 1e-18
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera] 97 3e-18
emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera] 97 3e-18
gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subc... 97 4e-18
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 97 4e-18
emb|CAN79459.1| hypothetical protein VITISV_004379 [Vitis vinifera] 97 4e-18
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera] 97 4e-18
emb|CAN64527.1| hypothetical protein VITISV_042009 [Vitis vinifera] 97 4e-18
emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera] 97 5e-18
emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera] 97 5e-18
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 97 5e-18
emb|CAN69974.1| hypothetical protein VITISV_014388 [Vitis vinifera] 97 5e-18
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera] 97 5e-18
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 103 bits (256), Expect(2) = 2e-20
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = +1
Query: 4 VSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTTG 183
VSR+ ++ G +HW AVKRILRYI+GT N+ LCY G + GY D+++AGDLD+RKSTTG
Sbjct: 1117 VSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGGSEFTVRGYVDSDFAGDLDKRKSTTG 1176
Query: 184 YLFTLEGGAVTWGSK 228
Y+FTL G AV+W SK
Sbjct: 1177 YVFTLAGAAVSWVSK 1191
Score = 21.9 bits (45), Expect(2) = 2e-20
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1193 QTVVALSTTEAEYMAAT 1209
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 101 bits (252), Expect(2) = 7e-20
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSR+ ++ G +HW AVKRILRYI+GT ++ LCY G + GY D+++AGDLD+RKSTT
Sbjct: 1116 VVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGGSEFTVRGYVDSDFAGDLDKRKSTT 1175
Query: 181 GYLFTLEGGAVTWGSK 228
GY+FTL G AV+W SK
Sbjct: 1176 GYVFTLAGAAVSWVSK 1191
Score = 21.9 bits (45), Expect(2) = 7e-20
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1193 QTVVALSTTEAEYMAAT 1209
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 101 bits (251), Expect(2) = 9e-20
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +1
Query: 4 VSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTTG 183
VSRF + G +HW AVKRILRYI+GT LC+ G + GY D+++AGDLD+RKSTTG
Sbjct: 1113 VSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGSEFTIRGYVDSDFAGDLDKRKSTTG 1172
Query: 184 YLFTLEGGAVTWGSK 228
Y+FTL GGAV+W SK
Sbjct: 1173 YVFTLAGGAVSWLSK 1187
Score = 21.9 bits (45), Expect(2) = 9e-20
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1189 QTVVALSTTEAEYMAAT 1205
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 100 bits (248), Expect(2) = 2e-19
Identities = 45/76 (59%), Positives = 59/76 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF + G +HW AVKRI+RYIKGT + +C+ G L + GY D+++AGD D+RKSTT
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTT 1171
Query: 181 GYLFTLEGGAVTWGSK 228
GY+FTL GGAV+W SK
Sbjct: 1172 GYVFTLTGGAVSWLSK 1187
Score = 21.9 bits (45), Expect(2) = 2e-19
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1189 QTVVALSTTEAEYMAAT 1205
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 100 bits (248), Expect(2) = 2e-19
Identities = 45/76 (59%), Positives = 59/76 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF + G +HW AVKRI+RYIKGT + +C+ G L + GY D+++AGD D+RKSTT
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTT 1171
Query: 181 GYLFTLEGGAVTWGSK 228
GY+FTL GGAV+W SK
Sbjct: 1172 GYVFTLAGGAVSWLSK 1187
Score = 21.9 bits (45), Expect(2) = 2e-19
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1189 QTVVALSTTEAEYMAAT 1205
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 100 bits (248), Expect(2) = 2e-19
Identities = 45/76 (59%), Positives = 59/76 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF + G +HW AVKRI+RYIKGT + +C+ G L + GY D+++AGD D+RKSTT
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGDHDKRKSTT 1171
Query: 181 GYLFTLEGGAVTWGSK 228
GY+FTL GGAV+W SK
Sbjct: 1172 GYVFTLAGGAVSWLSK 1187
Score = 21.9 bits (45), Expect(2) = 2e-19
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1189 QTVVALSTTEAEYMAAT 1205
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 99.4 bits (246), Expect(2) = 3e-19
Identities = 45/76 (59%), Positives = 59/76 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF + G +HW AVKRI+RYIKGT + +C+ G L + GY D+++AGD D+RKSTT
Sbjct: 1112 VVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVWGYVDSDFAGDHDKRKSTT 1171
Query: 181 GYLFTLEGGAVTWGSK 228
GY+FTL GGAV+W SK
Sbjct: 1172 GYVFTLAGGAVSWLSK 1187
Score = 21.9 bits (45), Expect(2) = 3e-19
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 231 ETSTALSTAEAEYVTCS 281
+T ALST EAEY+ +
Sbjct: 1189 QTVVALSTTEAEYMAAT 1205
>gb|KMQ82579.1| retrovirus-related pol polyprotein from transposon tnt 1-94 [Lasius
niger]
Length = 271
Score = 98.6 bits (244), Expect = 1e-18
Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEV-LELHGYSDANWAGDLDQRKST 177
++SRF S+ G +HW AVKRI RY+KGT+NL L Y + ++ G++DANWA DLD R+ST
Sbjct: 61 MISRFNSNPGKEHWKAVKRIFRYLKGTINLGLEYSKKAEQDIIGFADANWASDLDLRRST 120
Query: 178 TGYLFTLEGGAVTWGSKKRP 237
TGY F L+G A++W SK++P
Sbjct: 121 TGYAFILQGAAMSWNSKRQP 140
>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
Length = 1279
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 1087 VVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 1146
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 1147 GFVFTLGGTAISWAS 1161
>emb|CAN63196.1| hypothetical protein VITISV_035792 [Vitis vinifera]
Length = 1179
Score = 97.4 bits (241), Expect = 3e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 1059 VVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 1118
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 1119 GFVFTLGGTAISWAS 1133
>gb|ABA93820.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1166
Score = 97.1 bits (240), Expect = 4e-18
Identities = 43/80 (53%), Positives = 59/80 (73%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S+ G HW A++R++RY+KGTM L L Y G L GYSD+NW D+D+ K+T+
Sbjct: 969 MVSRFTSNPGDDHWRALERVMRYLKGTMELGLHYSGYPAVLEGYSDSNWISDVDEIKATS 1028
Query: 181 GYLFTLEGGAVTWGSKKRPL 240
GY+FTL GGAV+W S K+ +
Sbjct: 1029 GYVFTLGGGAVSWRSCKQTI 1048
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 97.1 bits (240), Expect = 4e-18
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSR+ ++ G +HW VKRILRYIKGT ++ LCY G ++GY D+++AGDLD+ KSTT
Sbjct: 1105 VVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIINGYVDSDYAGDLDKSKSTT 1164
Query: 181 GYLFTLEGGAVTWGSK 228
GY+F + GGAV+W SK
Sbjct: 1165 GYVFKVAGGAVSWVSK 1180
>emb|CAN79459.1| hypothetical protein VITISV_004379 [Vitis vinifera]
Length = 409
Score = 97.1 bits (240), Expect = 4e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 225 VVSRFMSRXGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 284
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 285 GFVFTLGGTAISWXS 299
>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
Length = 1252
Score = 97.1 bits (240), Expect = 4e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 877 IVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 936
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 937 GFVFTLGGTAISWTS 951
>emb|CAN64527.1| hypothetical protein VITISV_042009 [Vitis vinifera]
Length = 222
Score = 97.1 bits (240), Expect = 4e-18
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW A+K ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 30 VVSRFMSRPGKQHWEAIKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 89
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 90 GFVFTLGGTAISWAS 104
>emb|CAN74624.1| hypothetical protein VITISV_024822 [Vitis vinifera]
Length = 1250
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 1058 VVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 1117
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 1118 GFVFTLGGTAISWTS 1132
>emb|CAN71224.1| hypothetical protein VITISV_006366 [Vitis vinifera]
Length = 1951
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 124 VVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 183
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 184 GFVFTLGGTAISWTS 198
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 1030 VVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 1089
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 1090 GFVFTLGGTAISWTS 1104
>emb|CAN69974.1| hypothetical protein VITISV_014388 [Vitis vinifera]
Length = 1058
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 894 VVSRFMSRLGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 953
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 954 GFVFTLGGTAISWTS 968
>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
Length = 1269
Score = 96.7 bits (239), Expect = 5e-18
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 1 LVSRFQSSAGSQHWYAVKRILRYIKGTMNLRLCYQGEVLELHGYSDANWAGDLDQRKSTT 180
+VSRF S G QHW AVK ILRY+KG+++ LC+ G L+L GY DA++AGD+D RKSTT
Sbjct: 1077 VVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLKLQGYVDADFAGDIDSRKSTT 1136
Query: 181 GYLFTLEGGAVTWGS 225
G++FTL G A++W S
Sbjct: 1137 GFVFTLGGTAISWTS 1151