BLASTX nr result

ID: Cinnamomum25_contig00034173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00034173
         (272 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010252470.1| PREDICTED: putative pentatricopeptide repeat...    64   4e-08
ref|XP_009347135.1| PREDICTED: putative pentatricopeptide repeat...    57   5e-06

>ref|XP_010252470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330 [Nelumbo nucifera]
          Length = 475

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 36/86 (41%), Positives = 45/86 (52%)
 Frame = -2

Query: 259 FPPQLLLHFIHNHCKNINQLNQIHTLFITTGLLXXXXXXXXXXXXXXNAHSTTTFFYDTL 80
           +P + LL  +    K+ NQ+NQIH+L IT G L                   +T  Y+TL
Sbjct: 3   YPLERLLLLLQRFIKHSNQVNQIHSLLITNGHLHFQPACKNSALKWI-----STLLYNTL 57

Query: 79  IRAHLLLQSPHKSLFLFIHMLTHSIP 2
           IRAHL L  PHK+L LF HML H  P
Sbjct: 58  IRAHLNLGDPHKALLLFTHMLAHQAP 83


>ref|XP_009347135.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330 [Pyrus x bretschneideri]
          Length = 473

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/89 (39%), Positives = 42/89 (47%)
 Frame = -2

Query: 268 MSHFPPQLLLHFIHNHCKNINQLNQIHTLFITTGLLXXXXXXXXXXXXXXNAHSTTTFFY 89
           M    P+ LL  +    K+ NQ+ QIH+  IT G L                    T  Y
Sbjct: 1   MPESSPESLLQLLQCFLKHPNQIKQIHSRLITNGHLLHNQNPKPSASKWMP-----TLPY 55

Query: 88  DTLIRAHLLLQSPHKSLFLFIHMLTHSIP 2
           +TLIRAHL    P K+L LFIHMLTH  P
Sbjct: 56  NTLIRAHLGFSQPRKTLLLFIHMLTHQAP 84


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