BLASTX nr result

ID: Cinnamomum25_contig00034104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00034104
         (267 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008445200.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_008219679.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_010250083.1| PREDICTED: pentatricopeptide repeat-containi...    60   6e-07
emb|CDP13497.1| unnamed protein product [Coffea canephora]             60   6e-07
ref|XP_008387666.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_012076594.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06

>ref|XP_008445200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis melo]
           gi|659088862|ref|XP_008445201.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis melo]
          Length = 606

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = -2

Query: 176 SSTNRRASEQKCLSLLQTCDSLPKLSQIHAHLLKSGLHTN 57
           S+TN RA+EQ CL+LLQ C++LPKL+QIH H++K GLH N
Sbjct: 21  STTNPRAAEQNCLALLQACNALPKLTQIHTHIVKLGLHNN 60


>ref|XP_008219679.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Prunus mume]
          Length = 606

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -2

Query: 218 QHSLLPTPASKPLLSSTNRRASEQKCLSLLQTCDSLPKLSQIHAHLLKSGLHTN 57
           + S L  PA K    + N+R +EQ CL+LLQ CD++PKL+Q+H H+LK GL  N
Sbjct: 7   KRSKLIVPALKTTAIAANKREAEQSCLALLQACDAVPKLAQLHGHVLKLGLRNN 60


>ref|XP_010250083.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Nelumbo nucifera]
          Length = 631

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -2

Query: 212 SLLPTPASKPLLSSTNRRASEQKCLSLLQTCDSLPKLSQIHAHLLKSGLHTN 57
           S L + A+   L + N R +EQ CL+LL++C+SL KL+QIHAHLLKSGL  N
Sbjct: 31  STLRSSAATTSLYNNNSRVAEQNCLALLESCNSLAKLTQIHAHLLKSGLQNN 82


>emb|CDP13497.1| unnamed protein product [Coffea canephora]
          Length = 608

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/69 (44%), Positives = 45/69 (65%)
 Frame = -2

Query: 263 SPTQLFKHTLPLTTFQHSLLPTPASKPLLSSTNRRASEQKCLSLLQTCDSLPKLSQIHAH 84
           S T+LF++        H+L P P +     ++ +RA+EQ CL+LL+ C++ PKLSQIH H
Sbjct: 6   SKTKLFRYL-------HTLPPPPKT-----ASKKRAAEQNCLALLELCNNFPKLSQIHTH 53

Query: 83  LLKSGLHTN 57
           +LK GL TN
Sbjct: 54  ILKLGLQTN 62


>ref|XP_008387666.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Malus domestica]
          Length = 595

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -2

Query: 188 KPLLSSTNRRASEQKCLSLLQTCDSLPKLSQIHAHLLKSGLHTN 57
           K  + + NRR +EQ CL+LLQ CD++ KLSQIHAH+LKSGL  N
Sbjct: 6   KTAIFTANRREAEQSCLALLQGCDAVSKLSQIHAHVLKSGLQNN 49


>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
           gi|700207823|gb|KGN62942.1| hypothetical protein
           Csa_2G381680 [Cucumis sativus]
          Length = 606

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -2

Query: 176 SSTNRRASEQKCLSLLQTCDSLPKLSQIHAHLLKSGLHTN 57
           S+ N RA EQ CL+LLQ C++LPKL+QIH H+LK GLH N
Sbjct: 21  STPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNN 60


>ref|XP_012076594.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Jatropha curcas]
           gi|643724406|gb|KDP33607.1| hypothetical protein
           JCGZ_07178 [Jatropha curcas]
          Length = 612

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
 Frame = -2

Query: 194 ASKPLLSST-----NRRASEQKCLSLLQTCDSLPKLSQIHAHLLKSGLHTN 57
           AS   L+ST     NRRA+EQKCL+LLQ C+SL KL+Q+H ++LKSGL  N
Sbjct: 16  ASTITLASTIHCTGNRRAAEQKCLALLQDCNSLSKLTQVHTYILKSGLQNN 66


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