BLASTX nr result

ID: Cinnamomum25_contig00031877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00031877
         (226 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006409621.1| hypothetical protein EUTSA_v10022557mg [Eutr...    60   7e-07
ref|XP_010271739.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_010452146.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_010423808.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06
ref|XP_010490755.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
emb|CDX71199.1| BnaC07g04780D [Brassica napus]                         57   4e-06
ref|XP_009108234.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   5e-06

>ref|XP_006409621.1| hypothetical protein EUTSA_v10022557mg [Eutrema salsugineum]
           gi|557110783|gb|ESQ51074.1| hypothetical protein
           EUTSA_v10022557mg [Eutrema salsugineum]
          Length = 828

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 25/51 (49%), Positives = 35/51 (68%)
 Frame = -3

Query: 224 PFPQRRPPTSRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLNPQADVG 72
           P   + P    ++R+GKS+D N GKPW+ NG+SPQGQQ L++L+ P  D G
Sbjct: 67  PITPQTPKNRNRTRIGKSRDPNLGKPWSYNGLSPQGQQILRSLIEPSFDSG 117


>ref|XP_010271739.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Nelumbo nucifera]
          Length = 829

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
 Frame = -3

Query: 218 PQRRPPT---SRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLN 90
           P   PP     R++RLGKS+D NRGKPW S+ +SPQGQQ LQ LLN
Sbjct: 68  PHAPPPPILLRRRTRLGKSRDENRGKPWASDRLSPQGQQILQTLLN 113


>ref|XP_010452146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Camelina sativa]
          Length = 819

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = -3

Query: 224 PFPQRRPPTSRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLNPQADVG 72
           P   + P    ++R+GKS+D N GKPW+ +G+SPQGQQ L++L+ P  D G
Sbjct: 64  PISSQTPRNRNRTRIGKSRDSNLGKPWSYHGLSPQGQQVLRSLIEPTFDSG 114


>ref|XP_010423808.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Camelina sativa]
          Length = 819

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = -3

Query: 224 PFPQRRPPTSRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLNPQADVG 72
           P   + P    ++R+GKS+D N GKPW+ +G+SPQGQQ L++L+ P  D G
Sbjct: 64  PISSQTPRNRNRTRIGKSRDSNLGKPWSYHGLSPQGQQVLRSLIEPTFDSG 114


>ref|XP_010490755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like isoform X1 [Camelina sativa]
           gi|727638961|ref|XP_010490756.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g02860-like isoform X2 [Camelina sativa]
          Length = 820

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = -3

Query: 224 PFPQRRPPTSRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLNPQADVG 72
           P   + P    ++R+GKS+D N GKPW+ +G+SPQGQQ L++L+ P  D G
Sbjct: 65  PISSQPPRNRNRTRIGKSRDSNLGKPWSYHGLSPQGQQVLRSLIEPTFDSG 115


>emb|CDX71199.1| BnaC07g04780D [Brassica napus]
          Length = 181

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = -3

Query: 224 PFPQRRPPTSRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLNPQADVG 72
           P   + P T  ++R+GKS+D N GKPW+ +G+SP GQQ L++L+ P  D G
Sbjct: 64  PITPQTPKTRNRTRIGKSRDPNLGKPWSYHGLSPHGQQILRSLIEPTFDSG 114


>ref|XP_009108234.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g02860 [Brassica rapa]
          Length = 828

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = -3

Query: 224 PFPQRRPPTSRKSRLGKSQDHNRGKPWTSNGVSPQGQQCLQALLNPQADVG 72
           P   + P T  ++R+GKS+D N GKPW+ +G+SP GQQ L++L+ P  D G
Sbjct: 61  PITPQPPKTRNRTRIGKSRDPNLGKPWSYHGLSPHGQQILRSLIEPTFDSG 111


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