BLASTX nr result

ID: Cinnamomum25_contig00031759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00031759
         (270 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHI16398.1| nad9 (mitochondrion) [Triticum turgidum subsp. du...    57   2e-10
ref|YP_398414.1| nad9 (mitochondrion) [Triticum aestivum] gi|556...    57   1e-09

>gb|AHI16398.1| nad9 (mitochondrion) [Triticum turgidum subsp. durum]
          Length = 287

 Score = 57.0 bits (136), Expect(2) = 2e-10
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -1

Query: 189 IFIGSQSLLDSAQARNSHAFLGWTNPTGDFRQVFLHXXXXXXXXXXXXXXFMDNQFIFKY 10
           + + S SLL      +SHAFLG TNPTGDFRQVFL               FMDNQ IF+Y
Sbjct: 51  LLVASLSLLPL----HSHAFLGRTNPTGDFRQVFLLRARSGTKIKLSLFSFMDNQSIFQY 106

Query: 9   SWE 1
           SWE
Sbjct: 107 SWE 109



 Score = 35.0 bits (79), Expect(2) = 2e-10
 Identities = 15/22 (68%), Positives = 15/22 (68%)
 Frame = -3

Query: 262 FYTRFITRACSLLWRQRYRKCA 197
           FYTRF TRACS  W   Y KCA
Sbjct: 24  FYTRFNTRACSRSWIHHYIKCA 45


>ref|YP_398414.1| nad9 (mitochondrion) [Triticum aestivum]
           gi|556926996|ref|YP_008757353.1| NADH dehydrogenase
           subunit 9 (mitochondrion) [Aegilops speltoides]
           gi|556927193|ref|YP_008758151.1| NADH dehydrogenase
           subunit 9 (mitochondrion) [Triticum timopheevii]
           gi|416536|emb|CAA49376.1| 30 kDa subunit of complex I
           NADH dehydrogenase (mitochondrion) [Triticum aestivum]
           gi|78675254|dbj|BAE47679.1| nad9 (mitochondrion)
           [Triticum aestivum] gi|169649064|gb|ACA62625.1| nad9
           (mitochondrion) [Triticum aestivum]
           gi|549067740|dbj|BAN94712.1| NADH dehydrogenase subunit
           9 (mitochondrion) [Triticum timopheevii]
           gi|549067760|dbj|BAN94731.1| NADH dehydrogenase subunit
           9 (mitochondrion) [Aegilops speltoides]
           gi|578888265|gb|AHI16369.1| nad9 (mitochondrion)
           [Triticum turgidum subsp. durum]
          Length = 287

 Score = 57.0 bits (136), Expect(2) = 1e-09
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -1

Query: 189 IFIGSQSLLDSAQARNSHAFLGWTNPTGDFRQVFLHXXXXXXXXXXXXXXFMDNQFIFKY 10
           + + S SLL      +SHAFLG TNPTGDFRQVFL               FMDNQ IF+Y
Sbjct: 51  LLVASLSLLPL----HSHAFLGRTNPTGDFRQVFLLRARSGTKIKLSLFSFMDNQSIFQY 106

Query: 9   SWE 1
           SWE
Sbjct: 107 SWE 109



 Score = 32.0 bits (71), Expect(2) = 1e-09
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 262 FYTRFITRACSLLWRQRYRKC 200
           FYTRF TRACS  W    +KC
Sbjct: 24  FYTRFNTRACSRSWIHNSKKC 44


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