BLASTX nr result
ID: Cinnamomum25_contig00031007
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00031007
(407 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010049527.1| PREDICTED: DNA-directed RNA polymerase III s... 82 2e-13
ref|XP_010049526.1| PREDICTED: DNA-directed RNA polymerase III s... 79 2e-12
ref|XP_008450913.1| PREDICTED: uncharacterized protein LOC103492... 76 8e-12
ref|XP_004144123.1| PREDICTED: DNA-directed RNA polymerase III s... 73 8e-11
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu... 70 4e-10
ref|XP_009384778.1| PREDICTED: uncharacterized protein LOC103972... 69 1e-09
ref|XP_012090466.1| PREDICTED: DNA-directed RNA polymerase III s... 68 3e-09
gb|KDP22444.1| hypothetical protein JCGZ_26275 [Jatropha curcas] 68 3e-09
ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4... 66 1e-08
ref|XP_011629415.1| PREDICTED: uncharacterized protein LOC184257... 65 2e-08
ref|XP_011629412.1| PREDICTED: uncharacterized protein LOC184257... 65 2e-08
ref|XP_010258842.1| PREDICTED: DNA-directed RNA polymerase III s... 65 2e-08
ref|XP_012077029.1| PREDICTED: DNA-directed RNA polymerase III s... 64 3e-08
ref|XP_009361687.1| PREDICTED: uncharacterized protein LOC103951... 63 7e-08
ref|XP_012448093.1| PREDICTED: uncharacterized protein LOC105771... 63 9e-08
ref|XP_010270534.1| PREDICTED: uncharacterized protein LOC104606... 63 9e-08
gb|KDO54063.1| hypothetical protein CISIN_1g022055mg [Citrus sin... 63 9e-08
ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citr... 63 9e-08
ref|XP_010090130.1| DNA-directed RNA polymerase III subunit RPC4... 62 1e-07
gb|KHG12357.1| DNA-directed RNA polymerase III subunit RPC4 [Gos... 62 1e-07
>ref|XP_010049527.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X2
[Eucalyptus grandis] gi|629117484|gb|KCW82159.1|
hypothetical protein EUGRSUZ_C03553 [Eucalyptus grandis]
gi|629117485|gb|KCW82160.1| hypothetical protein
EUGRSUZ_C03553 [Eucalyptus grandis]
Length = 304
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = -1
Query: 278 KNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDED----ALNQELLKRFKEGVVRSAPKVE 111
K APP+K++F PK PP + P P VK++ RDD+D A ++LL+ F EG+++ PK+E
Sbjct: 9 KAAPPRKVRFAPKAPPVRKPKPAAVKTEARDDDDDDDEAKAKDLLRHFNEGILKEKPKIE 68
Query: 110 KKSAPVQVAFGQGATTA 60
+K AP Q+AFG G T+A
Sbjct: 69 RKVAPSQIAFGYGGTSA 85
>ref|XP_010049526.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X1
[Eucalyptus grandis]
Length = 304
Score = 78.6 bits (192), Expect = 2e-12
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Frame = -1
Query: 278 KNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDED----ALNQELLKRFKEGVVRSAPKVE 111
K A P+K++F PK PP + P P VK++ RDD+D A ++LL+ F EG+++ PK+E
Sbjct: 9 KAAAPRKVRFAPKAPPVRKPKPAAVKTEARDDDDDDDEAKAKDLLRHFNEGILKEKPKIE 68
Query: 110 KKSAPVQVAFGQGATTA 60
+K AP Q+AFG G T+A
Sbjct: 69 RKVAPSQIAFGYGGTSA 85
>ref|XP_008450913.1| PREDICTED: uncharacterized protein LOC103492360 [Cucumis melo]
Length = 293
Score = 76.3 bits (186), Expect = 8e-12
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = -1
Query: 302 MGGDSSGGKNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRS 126
M D K APP+KLKF PK P R++P P EVK++ +D DA ++LLKRF E R+
Sbjct: 1 MEQDPPKNKTAPPRKLKFAPKAPIRRVPKP-EVKAEMAEDNDAAQARDLLKRFNESTQRA 59
Query: 125 APKVEKKSAPVQVAFGQGATTA 60
+V +K+AP QVAFG G +++
Sbjct: 60 KQRVGRKAAPTQVAFGSGGSSS 81
>ref|XP_004144123.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis
sativus] gi|700211187|gb|KGN66283.1| hypothetical
protein Csa_1G595870 [Cucumis sativus]
Length = 293
Score = 72.8 bits (177), Expect = 8e-11
Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -1
Query: 278 KNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPKVEKKS 102
K A P+KLKF PK P R+IP P EVK++ +D DA ++LLKRF E R+ +V +K+
Sbjct: 9 KTAAPRKLKFAPKAPVRRIPKP-EVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKA 67
Query: 101 APVQVAFGQGATTA 60
AP QVAFG G +++
Sbjct: 68 APTQVAFGSGGSSS 81
>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
gi|223544779|gb|EEF46295.1| DNA binding protein,
putative [Ricinus communis]
Length = 286
Score = 70.5 bits (171), Expect = 4e-10
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = -1
Query: 269 PPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPKVEKKSAPV 93
PP+KLK+ PK PPR+ P P EVKS+ +DEDA +L+K+F+E +R+ PK EKK
Sbjct: 9 PPRKLKYMPKAPPRRPPKP-EVKSEKAEDEDATQAMKLMKQFQERSMRAKPKAEKKVQAS 67
Query: 92 QVAFGQGATT 63
Q+AFG GA +
Sbjct: 68 QIAFGFGAAS 77
>ref|XP_009384778.1| PREDICTED: uncharacterized protein LOC103972235 [Musa acuminata
subsp. malaccensis]
Length = 295
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = -1
Query: 302 MGGDSSGGKNAPPKKLKFTPKVPPRKIPNPLEVKS-KTRDDEDALNQELLKRF-----KE 141
M G+ G P +K+KFTPK+PPRK P PL K+ K +D +++ELL + +
Sbjct: 1 MKGEQDGLPKFPARKMKFTPKIPPRKAPKPLTTKTEKPETKDDVVDKELLSKLNHAKAND 60
Query: 140 GVVRSAPKVEKKSAPVQVAFGQGATT 63
G++R PK ++K P +VAFG G+++
Sbjct: 61 GLMRRFPKSDRKVGPSEVAFGHGSSS 86
>ref|XP_012090466.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
[Jatropha curcas]
Length = 350
Score = 67.8 bits (164), Expect = 3e-09
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Frame = -1
Query: 266 PKKLKFTPKVPPRKIPNPLEVKSKTRD-----DEDALNQELLKRFKEGVVRSAPKVEKKS 102
P+K KFTPK PP++ P P KS+ D DE A Q+L+++F E + R PKVEKKS
Sbjct: 29 PRKAKFTPKAPPQRKPIPTVTKSEVNDSNNDEDEAAQAQKLMRKFNENLRRKVPKVEKKS 88
Query: 101 APVQVAFGQGA 69
+ VQVAFG GA
Sbjct: 89 S-VQVAFGPGA 98
>gb|KDP22444.1| hypothetical protein JCGZ_26275 [Jatropha curcas]
Length = 331
Score = 67.8 bits (164), Expect = 3e-09
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Frame = -1
Query: 266 PKKLKFTPKVPPRKIPNPLEVKSKTRD-----DEDALNQELLKRFKEGVVRSAPKVEKKS 102
P+K KFTPK PP++ P P KS+ D DE A Q+L+++F E + R PKVEKKS
Sbjct: 10 PRKAKFTPKAPPQRKPIPTVTKSEVNDSNNDEDEAAQAQKLMRKFNENLRRKVPKVEKKS 69
Query: 101 APVQVAFGQGA 69
+ VQVAFG GA
Sbjct: 70 S-VQVAFGPGA 79
>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
polymerase III subunit RPC4, putative [Theobroma cacao]
Length = 294
Score = 65.9 bits (159), Expect = 1e-08
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = -1
Query: 293 DSSGGKNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPK 117
+ K P+K++F PK PPR+ P LEVK++ +D DA+ ++LL+R + ++ PK
Sbjct: 2 EQKDNKTNAPRKMRFAPKAPPRQAPK-LEVKTEVVEDTDAVQARDLLQRLNQTSAKTKPK 60
Query: 116 VEKKSAPVQVAFGQGATTA 60
VEKK A QVAFG G +A
Sbjct: 61 VEKKVASSQVAFGHGGASA 79
>ref|XP_011629415.1| PREDICTED: uncharacterized protein LOC18425789 isoform X2
[Amborella trichopoda]
Length = 261
Score = 64.7 bits (156), Expect = 2e-08
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -1
Query: 281 GKNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDED-ALNQELLKRFKEGVVRSA--PKVE 111
G P K KF PK+ P+++PNP EVK +T + D L++ELLK K+ PK+E
Sbjct: 4 GSTNPIKPRKFMPKMRPKRVPNPAEVKRETIETADEKLSKELLKLIKQRQEDGGRLPKIE 63
Query: 110 KKSAPVQVAFGQG 72
KK APVQVAFG G
Sbjct: 64 KKGAPVQVAFGYG 76
>ref|XP_011629412.1| PREDICTED: uncharacterized protein LOC18425789 isoform X1
[Amborella trichopoda] gi|769821847|ref|XP_011629413.1|
PREDICTED: uncharacterized protein LOC18425789 isoform
X1 [Amborella trichopoda]
gi|769821849|ref|XP_011629414.1| PREDICTED:
uncharacterized protein LOC18425789 isoform X1
[Amborella trichopoda]
Length = 266
Score = 64.7 bits (156), Expect = 2e-08
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -1
Query: 281 GKNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDED-ALNQELLKRFKEGVVRSA--PKVE 111
G P K KF PK+ P+++PNP EVK +T + D L++ELLK K+ PK+E
Sbjct: 4 GSTNPIKPRKFMPKMRPKRVPNPAEVKRETIETADEKLSKELLKLIKQRQEDGGRLPKIE 63
Query: 110 KKSAPVQVAFGQG 72
KK APVQVAFG G
Sbjct: 64 KKGAPVQVAFGYG 76
>ref|XP_010258842.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Nelumbo
nucifera]
Length = 300
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -1
Query: 302 MGGDSSGGKNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDD-EDALNQELLKRFKEGVVRS 126
M + SG + +K+++ PK PPR+ P+E K++ +D E A ++ELL+R E R
Sbjct: 1 MEQEPSGTQARSTRKVRYAPKAPPRRTHKPIETKTEVVEDAEAAQSRELLRRVNEASARR 60
Query: 125 APKVEKKSAPVQVAFGQGATT 63
PKVEKK PVQVAFG G +
Sbjct: 61 GPKVEKK--PVQVAFGYGGAS 79
>ref|XP_012077029.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 [Jatropha
curcas] gi|643724702|gb|KDP33903.1| hypothetical protein
JCGZ_07474 [Jatropha curcas]
Length = 297
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -1
Query: 269 PPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPKVEKKSAPV 93
PP+K KF PK PPR+ P +E+KS+ ++ DA+ L+K+F+E +R+ PK+EKK
Sbjct: 9 PPRKHKFVPKAPPRRAPK-VEIKSEKIEEVDAVQAMNLMKQFQERSMRARPKIEKKVNAS 67
Query: 92 QVAFGQGA 69
Q+AFG GA
Sbjct: 68 QIAFGHGA 75
>ref|XP_009361687.1| PREDICTED: uncharacterized protein LOC103951924 [Pyrus x
bretschneideri] gi|694365788|ref|XP_009361688.1|
PREDICTED: uncharacterized protein LOC103951924 [Pyrus x
bretschneideri]
Length = 290
Score = 63.2 bits (152), Expect = 7e-08
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = -1
Query: 266 PKKLKFTPKVPPRKIPNP---LEVKSKTRDDEDALNQELLKRFKEGVVRSAPKVEKKSAP 96
P+K +F PK PR++P P +E T + + +ELLKRF E + + PK EKK AP
Sbjct: 7 PRKRRFIPKAAPRRVPKPEIKIEADHVTEESDAEKARELLKRFSERSIHARPKDEKKLAP 66
Query: 95 VQVAFGQGATTA 60
Q+AFG A+T+
Sbjct: 67 TQIAFGGAASTS 78
>ref|XP_012448093.1| PREDICTED: uncharacterized protein LOC105771231 isoform X1
[Gossypium raimondii] gi|763787464|gb|KJB54460.1|
hypothetical protein B456_009G035100 [Gossypium
raimondii]
Length = 284
Score = 62.8 bits (151), Expect = 9e-08
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -1
Query: 275 NAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPKVEKKSA 99
NAP +K++F PK P R+ P LEVK++ +D DA+ ++LL+R + ++ PKVEKK A
Sbjct: 9 NAPTRKVRFAPKAPTRRAPK-LEVKTEVVEDTDAVQARDLLQRLNQISAKTKPKVEKKVA 67
Query: 98 PVQVAFGQGA 69
QVAFG GA
Sbjct: 68 SSQVAFGFGA 77
>ref|XP_010270534.1| PREDICTED: uncharacterized protein LOC104606837 [Nelumbo nucifera]
Length = 302
Score = 62.8 bits (151), Expect = 9e-08
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = -1
Query: 278 KNAPPKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPKVEKKS 102
K+A P+K+++ PK PPR+ P P K + +D A +ELL R E V PK+E+KS
Sbjct: 9 KHAIPRKVRYAPKAPPRRAPIPAAPKIEEVEDVKAFQTRELLXRVNESSVNGRPKMERKS 68
Query: 101 APVQVAFGQGATT 63
P QVAFG G ++
Sbjct: 69 GPAQVAFGFGPSS 81
>gb|KDO54063.1| hypothetical protein CISIN_1g022055mg [Citrus sinensis]
Length = 303
Score = 62.8 bits (151), Expect = 9e-08
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -1
Query: 263 KKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFK--EGVVRSAPKVEKKSAPV 93
+K+K+ PK PPR++P EVK++ ++ DA +LL+RF +G ++ PKVEKK AP
Sbjct: 14 RKIKYAPKAPPRRVPKA-EVKTEMVENADAAQAMDLLQRFNANQGALKGRPKVEKKVAPS 72
Query: 92 QVAFGQGATT 63
Q+AFGQG +
Sbjct: 73 QIAFGQGGAS 82
>ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citrus clementina]
gi|568853572|ref|XP_006480425.1| PREDICTED:
uncharacterized protein LOC102622464 [Citrus sinensis]
gi|557530644|gb|ESR41827.1| hypothetical protein
CICLE_v10012311mg [Citrus clementina]
Length = 303
Score = 62.8 bits (151), Expect = 9e-08
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = -1
Query: 263 KKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFK--EGVVRSAPKVEKKSAPV 93
+K+K+ PK PPR++P EVK++ ++ DA +LL+RF +G ++ PKVEKK AP
Sbjct: 14 RKIKYAPKAPPRRVPKA-EVKTEMVENADAAQAMDLLQRFNANQGALKGRPKVEKKVAPS 72
Query: 92 QVAFGQGATT 63
Q+AFGQG +
Sbjct: 73 QIAFGQGGAS 82
>ref|XP_010090130.1| DNA-directed RNA polymerase III subunit RPC4 [Morus notabilis]
gi|587848668|gb|EXB38927.1| DNA-directed RNA polymerase
III subunit RPC4 [Morus notabilis]
Length = 328
Score = 62.4 bits (150), Expect = 1e-07
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -1
Query: 266 PKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALNQE-LLKRFKEGVVRSAPKVEKKSAPVQ 90
P+K +F PK PP ++P EVK++ ++ DA LL+RF EG R+ PKVEKK A Q
Sbjct: 13 PRKRRFMPKAPPSRVPKA-EVKAEVVEETDADQARVLLRRFNEGSTRAKPKVEKKVAAAQ 71
Query: 89 VAFGQGATT 63
VAFG G +
Sbjct: 72 VAFGYGGAS 80
>gb|KHG12357.1| DNA-directed RNA polymerase III subunit RPC4 [Gossypium arboreum]
Length = 288
Score = 62.4 bits (150), Expect = 1e-07
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -1
Query: 266 PKKLKFTPKVPPRKIPNPLEVKSKTRDDEDALN-QELLKRFKEGVVRSAPKVEKKSAPVQ 90
P+K++F PK PPRK P LEVK++ +D DA+ ++LL+R + R+ PKVEKK + Q
Sbjct: 11 PRKMRFAPKAPPRKAPK-LEVKTEVVEDIDAVQARDLLQRLNQTSARTKPKVEKKVSSSQ 69
Query: 89 VAFGQG 72
VAFG G
Sbjct: 70 VAFGFG 75