BLASTX nr result

ID: Cinnamomum25_contig00028231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00028231
         (343 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520827.1| APO protein 3, mitochondrial precursor, puta...    61   3e-07
ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic isof...    58   2e-06
ref|XP_006467238.1| PREDICTED: APO protein 1, chloroplastic-like...    57   4e-06
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]    57   6e-06

>ref|XP_002520827.1| APO protein 3, mitochondrial precursor, putative [Ricinus communis]
           gi|223539958|gb|EEF41536.1| APO protein 3, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 400

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 37/99 (37%), Positives = 46/99 (46%)
 Frame = -1

Query: 298 SLLNQSNWVAKFGHRQILPGGAMPYKVIRCVLKDPDQGLPVKKQEVVPQNVNXXXXXXXX 119
           S L+  N   KFG +Q+  G     K   C  + P Q   V KQE  PQNV+        
Sbjct: 9   STLSSENLRLKFGLQQLQKGVPQISKTFICAYQRPRQKQNVNKQESYPQNVDLPPILPKK 68

Query: 118 XXXXXXXXXXXXXXLAKADKELTQKGIEKPLDPPKNGLL 2
                          A+ DK+L + GIEKPL+PPKNGLL
Sbjct: 69  KKKPYPIPFRLIQKAARRDKKLAEMGIEKPLEPPKNGLL 107


>ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic isoform X2 [Vitis vinifera]
           gi|731420615|ref|XP_010661441.1| PREDICTED: APO protein
           1, chloroplastic isoform X2 [Vitis vinifera]
           gi|731420617|ref|XP_010661442.1| PREDICTED: APO protein
           1, chloroplastic isoform X2 [Vitis vinifera]
           gi|297734690|emb|CBI16741.3| unnamed protein product
           [Vitis vinifera]
          Length = 444

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/89 (38%), Positives = 41/89 (46%)
 Frame = -1

Query: 268 KFGHRQILPGGAMPYKVIRCVLKDPDQGLPVKKQEVVPQNVNXXXXXXXXXXXXXXXXXX 89
           KF   QIL G         CV + P +    KKQ   PQNV+                  
Sbjct: 43  KFQQGQILTGQPKISGTFLCVSQKPQEDATFKKQIAYPQNVDLPPILPKKKKKPYPIPLK 102

Query: 88  XXXXLAKADKELTQKGIEKPLDPPKNGLL 2
                A+ DK+L QKGIEKPL+PPKNGL+
Sbjct: 103 KIRQAARDDKKLAQKGIEKPLEPPKNGLI 131


>ref|XP_006467238.1| PREDICTED: APO protein 1, chloroplastic-like isoform X1 [Citrus
           sinensis] gi|568825747|ref|XP_006467239.1| PREDICTED:
           APO protein 1, chloroplastic-like isoform X2 [Citrus
           sinensis] gi|641859943|gb|KDO78633.1| hypothetical
           protein CISIN_1g013320mg [Citrus sinensis]
           gi|641859944|gb|KDO78634.1| hypothetical protein
           CISIN_1g013320mg [Citrus sinensis]
           gi|641859945|gb|KDO78635.1| hypothetical protein
           CISIN_1g013320mg [Citrus sinensis]
          Length = 445

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/99 (33%), Positives = 46/99 (46%)
 Frame = -1

Query: 298 SLLNQSNWVAKFGHRQILPGGAMPYKVIRCVLKDPDQGLPVKKQEVVPQNVNXXXXXXXX 119
           S ++  N + KF    +    +M  +   C  + P Q L  KKQ+  PQNV+        
Sbjct: 35  SSISPHNLLLKFRCEHLQNAESMSSRTFLCASRRPLQDLSFKKQKAYPQNVDLPTLPPKK 94

Query: 118 XXXXXXXXXXXXXXLAKADKELTQKGIEKPLDPPKNGLL 2
                         +AK DK L + GIEKPL+PPKNG+L
Sbjct: 95  KKKPYPIPIEKIRQVAKKDKRLAEMGIEKPLEPPKNGIL 133


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/89 (37%), Positives = 41/89 (46%)
 Frame = -1

Query: 268 KFGHRQILPGGAMPYKVIRCVLKDPDQGLPVKKQEVVPQNVNXXXXXXXXXXXXXXXXXX 89
           +F   QIL G         CV + P +    KKQ   PQNV+                  
Sbjct: 531 EFQQGQILTGQPKISGTFLCVSQKPQEDATFKKQIAYPQNVDLPPILPKKKKKPYPIPLK 590

Query: 88  XXXXLAKADKELTQKGIEKPLDPPKNGLL 2
                A+ DK+L QKGIEKPL+PPKNGL+
Sbjct: 591 KIRQAARDDKKLAQKGIEKPLEPPKNGLI 619


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