BLASTX nr result

ID: Cinnamomum25_contig00028089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00028089
         (461 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21005.3| unnamed protein product [Vitis vinifera]               58   2e-06
ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]    58   2e-06
ref|XP_010252388.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06

>emb|CBI21005.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
 Frame = -2

Query: 454 RRENPREFWGHPDGFYRENNSRQEFQRKPIGVNPRQEVQQNPNGFY---------RESPG 302
           ++EN  E   +PDGF  +N +  EFQ+KP G +P      +P GFY           +P 
Sbjct: 56  QKENSPENHQNPDGFDADNQNHIEFQQKPNGQSPGGYFSGSPQGFYGGNSVEAQQSINPN 115

Query: 301 LGFQQNPDGVYGDNSSRQDFRHKPIEGRSSLDSLRSPNGFY--TDYRTREPHIDNSPGED 128
            GF++N    +  N   Q+       G++  D  ++P+G Y      + E H D +P   
Sbjct: 116 GGFEENLRNEFHRNPIGQNVNFNGYNGQNFRDLQQNPDGLYGGNSMNSSEVHQDLNP-RG 174

Query: 127 FRQYDHGRYQERPPQEGFQQYGD 59
           +R+Y    +++ P    F Q G+
Sbjct: 175 YREYARNEFKQNP----FSQSGN 193


>ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial [Vitis vinifera]
          Length = 807

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
 Frame = -2

Query: 454 RRENPREFWGHPDGFYRENNSRQEFQRKPIGVNPRQEVQQNPNGFY---------RESPG 302
           ++EN  E   +PDGF  +N +  EFQ+KP G +P      +P GFY           +P 
Sbjct: 56  QKENSPENHQNPDGFDADNQNHIEFQQKPNGQSPGGYFSGSPQGFYGGNSVEAQQSINPN 115

Query: 301 LGFQQNPDGVYGDNSSRQDFRHKPIEGRSSLDSLRSPNGFY--TDYRTREPHIDNSPGED 128
            GF++N    +  N   Q+       G++  D  ++P+G Y      + E H D +P   
Sbjct: 116 GGFEENLRNEFHRNPIGQNVNFNGYNGQNFRDLQQNPDGLYGGNSMNSSEVHQDLNP-RG 174

Query: 127 FRQYDHGRYQERPPQEGFQQYGD 59
           +R+Y    +++ P    F Q G+
Sbjct: 175 YREYARNEFKQNP----FSQSGN 193


>emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
 Frame = -2

Query: 454 RRENPREFWGHPDGFYRENNSRQEFQRKPIGVNPRQEVQQNPNGFY---------RESPG 302
           ++EN  E   +PDGF   N +  EFQ+KP G +P      +P GFY           +P 
Sbjct: 56  QKENSPENXQNPDGFDAXNQNHIEFQQKPNGQSPGGYFSGSPQGFYGGNSVEAQQSINPN 115

Query: 301 LGFQQNPDGVYGDNSSRQDFRHKPIEGRSSLDSLRSPNGFY--TDYRTREPHIDNSPGED 128
            GF++N    +  N   Q+       G++  D  ++P+G Y      + E H D +P   
Sbjct: 116 GGFEENLRNEFHRNPXGQNVNFNGYNGQNFRDLQQNPDGLYGGNSMNSSEVHQDLNP-RG 174

Query: 127 FRQYDHGRYQERPPQEGFQQYGD 59
           +R+Y    +++ P    F Q G+
Sbjct: 175 YREYARNEFEQNP----FSQSGN 193


>ref|XP_010252388.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
           mitochondrial-like [Nelumbo nucifera]
          Length = 732

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
 Frame = -2

Query: 451 RENPREFWG-----HPDGFYRENNSRQEFQRKPIGVNPR---------QEVQQNPNGFYR 314
           RE P   +G     +P+GFYREN   +EFQ  P+  N           Q++  NP GFY 
Sbjct: 161 RECPGGVYGENHGQNPNGFYRENPREEEFQPNPVEQNKNFNGFYRKDFQQLATNPTGFYS 220

Query: 313 ESPGLGFQQNPDGVYGDNSSRQDFRHKPIEGRSSLDSLRSPNGFYTDYRTREPHIDNSPG 134
           +S     QQ P G YG N+ +Q+      E     ++ + P GFY       P      G
Sbjct: 221 KSSNT-LQQGPSGYYGQNNYQQNLHGSRRE--DVRETQQKPTGFYQG----SPSTYQGSG 273

Query: 133 EDFRQYDHGRYQERPPQEGF--------QQYGDGYSGQ 44
               + D G  Q+ P   G+        QQ   G+ G+
Sbjct: 274 GPSYRSDFGGCQQGP--SGYYRQSVGEHQQSSSGFQGE 309


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