BLASTX nr result

ID: Cinnamomum25_contig00028065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00028065
         (747 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associat...   161   4e-37
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]   158   4e-36
emb|CBI31957.3| unnamed protein product [Vitis vinifera]              157   8e-36
ref|XP_010934978.1| PREDICTED: TATA box-binding protein-associat...   154   5e-35
ref|XP_003539004.1| PREDICTED: TATA box-binding protein-associat...   148   3e-33
ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associat...   144   7e-32
ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phas...   142   2e-31
ref|XP_008222719.1| PREDICTED: TATA box-binding protein-associat...   139   2e-30
ref|XP_007224504.1| hypothetical protein PRUPE_ppa023055mg, part...   136   1e-29
ref|XP_009800662.1| PREDICTED: TATA box-binding protein-associat...   134   4e-29
ref|XP_002522432.1| conserved hypothetical protein [Ricinus comm...   134   4e-29
gb|AES89250.2| TATA box-binding protein associated factor RNA po...   134   8e-29
gb|KEH29974.1| TATA box-binding protein associated factor RNA po...   134   8e-29
ref|XP_004507506.1| PREDICTED: TATA box-binding protein-associat...   132   2e-28
ref|XP_010044748.1| PREDICTED: TATA box-binding protein-associat...   131   4e-28
ref|XP_008337501.1| PREDICTED: TATA box-binding protein-associat...   131   4e-28
gb|KCW86852.1| hypothetical protein EUGRSUZ_B03445 [Eucalyptus g...   131   4e-28
ref|XP_010046659.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-bin...   131   5e-28
ref|XP_009391050.1| PREDICTED: TATA box-binding protein-associat...   130   6e-28
ref|XP_009391049.1| PREDICTED: TATA box-binding protein-associat...   130   6e-28

>ref|XP_002269865.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Vitis vinifera]
          Length = 722

 Score =  161 bits (407), Expect = 4e-37
 Identities = 100/232 (43%), Positives = 135/232 (58%), Gaps = 21/232 (9%)
 Frame = -3

Query: 634  DRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS 455
            + +P  +SS  Q SE D TELLC+L+  YD+L D ++YSKDL +YL+YCKDVV+AGL   
Sbjct: 443  NEEPVTNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELP 502

Query: 454  F---EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CIPKRSR-DEGNTIDSTDCLQSMD 296
            F   EE+  IEQLW  Y+ Q+D +PS + G  C      KRSR DEG       C+ S+ 
Sbjct: 503  FEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEG-------CINSI- 554

Query: 295  GPVTRMKSRTKGHRSLSMDGD---INNQTWMSP-----------KEEALRQIKSDMELDK 158
             P  + K R      L +DGD   +N+Q                KEEA+ ++K+DME ++
Sbjct: 555  -PKEKKKIRDDCSVPLGLDGDDTSLNSQGGQKSVPTHQASVETLKEEAILRMKADMEENR 613

Query: 157  LHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
              Y+PPR   K R  Y+ Y RK   G + + A ADYYILLR CAR+ Q+D+R
Sbjct: 614  FCYIPPRVNVK-RFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVR 664


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score =  158 bits (399), Expect = 4e-36
 Identities = 99/232 (42%), Positives = 136/232 (58%), Gaps = 21/232 (9%)
 Frame = -3

Query: 634  DRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS 455
            + +P  +SS  Q SE D TELLC+L+  YD+L D ++YSKDL +YL+YCKDVV+AGL   
Sbjct: 443  NEEPVTNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELP 502

Query: 454  F---EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CIPKRSR-DEGNTIDSTDCLQSMD 296
            F   EE+  IEQLW  Y+ Q+D +PS + G  C      KRSR DEG       C+ S+ 
Sbjct: 503  FEDHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEG-------CINSI- 554

Query: 295  GPVTRMKSRTKGHRSLSMDGD---INNQ-----------TWMSPKEEALRQIKSDMELDK 158
             P  + K R      L +DGD   +N+Q           +  + KEEA+ ++K+DME ++
Sbjct: 555  -PKEKKKIRDDCSVPLGLDGDDTSLNSQGGQXSVPTHQASVETVKEEAILRMKADMEENR 613

Query: 157  LHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
              Y+P R   K R  Y+ Y RK   G + + A ADYYILLR CAR+ Q+D+R
Sbjct: 614  FCYIPXRVNVK-RFDYLHYVRKKDEGSYIYAAHADYYILLRACARVAQVDVR 664


>emb|CBI31957.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score =  157 bits (396), Expect = 8e-36
 Identities = 91/215 (42%), Positives = 128/215 (59%), Gaps = 6/215 (2%)
 Frame = -3

Query: 628 KPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF- 452
           KP  +SS  Q SE D TELLC+L+  YD+L D ++YSKDL +YL+YCKDVV+AGL   F 
Sbjct: 371 KPVTNSSHAQKSEFDATELLCNLDARYDELIDTYEYSKDLPTYLQYCKDVVFAGLELPFE 430

Query: 451 --EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CIPKRSRDEGNTIDSTDCLQSMDGPV 287
             EE+  IEQLW  Y+ Q+D +PS + G  C      KRSR++   I+S          +
Sbjct: 431 DHEEEKIIEQLWEFYQNQKDSEPSEDLGVECGSALNEKRSRNDEGCINS----------I 480

Query: 286 TRMKSRTKGHRSLSMDGDINNQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYV 107
            + K + +   S+ +   +        KEEA+ ++K+DME ++  Y+PPR   K R  Y+
Sbjct: 481 PKEKKKIRDDCSVPLVETL--------KEEAILRMKADMEENRFCYIPPRVNVK-RFDYL 531

Query: 106 CYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            Y RK   G + + A ADYYILLR CAR+ Q+D+R
Sbjct: 532 HYVRKKDEGSYIYAAHADYYILLRACARVAQVDVR 566


>ref|XP_010934978.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Elaeis guineensis]
          Length = 764

 Score =  154 bits (389), Expect = 5e-35
 Identities = 88/215 (40%), Positives = 126/215 (58%), Gaps = 17/215 (7%)
 Frame = -3

Query: 595  SELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDNFIEQLWNL 416
            +E DT ELL  LE AYDK++D HDYSKDL SYLKYCKD+++AG+TTS++E+  IE+LWN+
Sbjct: 518  TEFDTKELLGILEGAYDKISDAHDYSKDLQSYLKYCKDIIFAGITTSYDEEILIERLWNI 577

Query: 415  YETQE-------------DIK----PSVEPGTGCCIPKRSRDEGNTIDSTDCLQSMDGPV 287
            Y+ QE             D+K        P +     K+ R++  +  + D  +S+D P+
Sbjct: 578  YDKQEVDNLQEDAKFEFLDLKGKRLRDEVPSSESINSKKPREDSKSSLNEDIGRSLDTPM 637

Query: 286  TRMKSRTKGHRSLSMDGDINNQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYV 107
                  T  +  L  D  + N +  S K   L ++K +ME +   YLPPR   +   GY+
Sbjct: 638  D--SKLTSTYEFLRNDSGLCNTSSTSCKSYTLDKMKINMEENGFQYLPPRLHQRT-DGYL 694

Query: 106  CYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
             Y RK + GK  +VA ADYYI+LR CA+L Q+D+R
Sbjct: 695  HYKRKRVDGKLIYVAHADYYIILRACAKLAQVDVR 729


>ref|XP_003539004.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B-like [Glycine max]
            gi|734418922|gb|KHN39839.1| hypothetical protein
            glysoja_020579 [Glycine soja]
          Length = 719

 Score =  148 bits (374), Expect = 3e-33
 Identities = 95/231 (41%), Positives = 128/231 (55%), Gaps = 22/231 (9%)
 Frame = -3

Query: 628  KPSRSSSPIQIS----ELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLT 461
            K S+ S+  Q+     ELD+  LL HL+  Y+++AD + YSKDL +YLKYC+DVV+AG  
Sbjct: 434  KESKDSAEDQVGSQKHELDSAWLLQHLQARYNEIADTYGYSKDLATYLKYCRDVVFAGSE 493

Query: 460  TSF---EEDNFIEQLWNLYETQEDIKPS--VEPGTGC----------CIPKRSRDEGNTI 326
             S+   EE+  IE LW  Y+ +ED KPS  VE               CI K S++E    
Sbjct: 494  PSYGNHEEEKMIEYLWKFYQNEEDTKPSENVEQSNTSFNQTSSRDKGCIGKISKEEKIRK 553

Query: 325  DSTDCLQSMDGPVTRMKSRTKGHRSLSMDGDINNQTWMSPK---EEALRQIKSDMELDKL 155
               + L   D       S    H SLS   D ++Q   S K   +EA+RQ+K +ME ++ 
Sbjct: 554  KGFNELFPDDDTSLEDVSNNNSHESLSDSEDSDSQEHSSGKSHVKEAIRQMKLEMEENRF 613

Query: 154  HYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            +Y+PP  K K R  Y+ Y RK   G   +VA ADYYILLR CAR+ Q+DIR
Sbjct: 614  YYIPPSVKRK-RLDYIHYVRKRDEGALTYVAHADYYILLRACARIAQVDIR 663


>ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X1 [Phoenix dactylifera]
          Length = 744

 Score =  144 bits (362), Expect = 7e-32
 Identities = 91/217 (41%), Positives = 127/217 (58%), Gaps = 19/217 (8%)
 Frame = -3

Query: 595  SELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDNFIEQLWNL 416
            +E DT ELL  LE AYDK++D HDYSKDL SYLKYCKD+++AG+TTS++E+  IE+LWN+
Sbjct: 486  AEFDTKELLGILEAAYDKISDAHDYSKDLQSYLKYCKDIIFAGITTSYDEEILIERLWNI 545

Query: 415  YETQE--DIKPSVEPGTGCCIPKRSRDE---GNTIDS----TDCLQSMDGPV----TRMK 275
            Y+ QE  +++  V+        KR RDE      IDS     D   S +  +    T M 
Sbjct: 546  YDKQEVDNLQEDVKFEFLDLKGKRLRDEVPSSELIDSKKPREDSKSSQNEGIGRSDTPMD 605

Query: 274  SR-TKGHRSLSMDGDINNQ-----TWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSG 113
            S+ T  +  L  D  +  +     T  S K   L ++K +ME +   YLPPR   +    
Sbjct: 606  SKLTTRYEFLRNDSGLQGKHPVCGTSTSSKSSTLAKMKINMEENGFQYLPPRIHQRT-DD 664

Query: 112  YVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            Y+ Y RK + GK  +VA ADYYI+LR C++L Q+D+R
Sbjct: 665  YLHYGRKRVDGKLIYVAHADYYIILRACSKLAQVDVR 701


>ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phaseolus vulgaris]
            gi|561004757|gb|ESW03751.1| hypothetical protein
            PHAVU_011G039300g [Phaseolus vulgaris]
          Length = 721

 Score =  142 bits (358), Expect = 2e-31
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 24/224 (10%)
 Frame = -3

Query: 601  QISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF---EEDNFIE 431
            Q  ELD+  L+ HL+  Y+++ D+++Y+KDL +YLKYC+DVV+AGL  S+   EE+N IE
Sbjct: 450  QKHELDSAWLIQHLQARYNEIGDINEYTKDLPTYLKYCRDVVFAGLEPSYGNHEEENMIE 509

Query: 430  QLWNLYETQEDIKPSVEPG-TGCCIPKRSRDEGNTIDST-------------------DC 311
             LWN Y+ +EDIKP    G +   + ++S  +   ID T                    C
Sbjct: 510  YLWNFYQNEEDIKPLENVGQSNSSLNQKSLKDKECIDRTSKQEKIREKSFSELFPGDESC 569

Query: 310  LQ-SMDGPVTRMKSRTKGHRSLSMDGDINNQTWMSPKEEALRQIKSDMELDKLHYLPPRS 134
            L+  + G V    S+             ++ +  S   EA+RQ+K DME ++  Y+PP  
Sbjct: 570  LEDDLSGSVDDNSSQESSSEGEEDSDSHDHSSGKSGVREAIRQMKLDMEENRFCYIPPSV 629

Query: 133  KSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            K K R  Y+ Y RK   G   +VA ADYYILLR CAR+  IDIR
Sbjct: 630  KRK-RLDYIHYARKRDEGALTYVAHADYYILLRACARIALIDIR 672


>ref|XP_008222719.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Prunus mume]
          Length = 721

 Score =  139 bits (350), Expect = 2e-30
 Identities = 91/244 (37%), Positives = 136/244 (55%), Gaps = 25/244 (10%)
 Frame = -3

Query: 658  VDSCDTEMDRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDV 479
            +D  DTE+ R  S +    Q SELD  ELL  LE  ++++AD ++Y KDL +YL++CKDV
Sbjct: 425  LDDTDTELVRNLSNA----QNSELDAAELLSSLEAKHNEIADTYEYCKDLPTYLQFCKDV 480

Query: 478  VYAGLTTSF---EEDNFIEQLWNLYETQEDIKPSVEPGTGC---CIPKRSRDE------- 338
            V+AG  +SF   +E+  IE LWN Y++++D + +VE G  C      KR RD        
Sbjct: 481  VFAGSKSSFKDHKEEELIELLWNFYQSRKDSETAVEQGLLCGETVNQKRLRDNEECTNDI 540

Query: 337  ------GNTIDSTDCLQSMDGPVTRMKSRTK-GHRSL-----SMDGDINNQTWMSPKEEA 194
                   N +  +      + P+   + R+K G  S      S + ++N+   +  KEEA
Sbjct: 541  SKEKRFSNKLPVSSPYSGDETPLADDQQRSKNGDNSCSSSQNSQNSEVNDAEAL--KEEA 598

Query: 193  LRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQ 14
            + ++K DME  +  Y+PPR   K R  Y+ Y RK   G + +VA ADYYILLR CAR+ +
Sbjct: 599  IARMKLDMEEKRFFYIPPRVNLK-RFDYLHYVRKKDEGAYTYVAHADYYILLRACARVAE 657

Query: 13   IDIR 2
            ++IR
Sbjct: 658  VEIR 661


>ref|XP_007224504.1| hypothetical protein PRUPE_ppa023055mg, partial [Prunus persica]
            gi|462421440|gb|EMJ25703.1| hypothetical protein
            PRUPE_ppa023055mg, partial [Prunus persica]
          Length = 677

 Score =  136 bits (343), Expect = 1e-29
 Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 10/229 (4%)
 Frame = -3

Query: 658  VDSCDTEMDRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDV 479
            +D  DTE+ R  S +    Q SELD  ELL  LE  ++++AD ++Y KDL +YL++CKDV
Sbjct: 426  LDDTDTELVRNLSNA----QNSELDAAELLSSLEAKHNEIADTYEYCKDLPTYLQFCKDV 481

Query: 478  VYAGLTTSF---EEDNFIEQLWNLYETQEDIKPSVEPGT--GCCIPKRSRDEGNTID--- 323
            V+AG  +SF   +E+  IE LWN Y++++D + ++E G   G  + ++   + N I    
Sbjct: 482  VFAGSKSSFKDHKEEELIELLWNFYQSRKDSETAIEQGLLWGETVNQKRVRDSNDISKEK 541

Query: 322  --STDCLQSMDGPVTRMKSRTKGHRSLSMDGDINNQTWMSPKEEALRQIKSDMELDKLHY 149
              S  C  S    V     RT+  R+  +            KEEA+ ++K DME  +  Y
Sbjct: 542  KFSNKCPVSSPYSVAHRIVRTQKLRTQKLS-----------KEEAIARMKLDMEEKRFFY 590

Query: 148  LPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            +PPR   K R  Y+ Y RK   G + +V  ADYYILLR CAR+ +++IR
Sbjct: 591  IPPRVNLK-RFDYLHYARKKDEGAYTYVPHADYYILLRACARVAEVEIR 638


>ref|XP_009800662.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X2 [Nicotiana sylvestris]
          Length = 701

 Score =  134 bits (338), Expect = 4e-29
 Identities = 89/240 (37%), Positives = 127/240 (52%), Gaps = 29/240 (12%)
 Frame = -3

Query: 634  DRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS 455
            D  P+ S   +  S+ D  ELL  LE  YD+L+D +D+SKDL SYL+YCKDVV+AGL  S
Sbjct: 426  DSDPNYSMPDVNESDFDALELLKILEAKYDELSDTYDFSKDLQSYLQYCKDVVFAGLEPS 485

Query: 454  F---EEDNFIEQLWNLYETQEDIKPS----VEPGT----------GCCIPKRSRDEGNTI 326
            +   EE+  IE LW+ Y++ +  + S    VEP T          G C       +  ++
Sbjct: 486  YEDHEEERIIEDLWDFYQSHKAEEASDDEKVEPHTCNGFQHKGSRGVCKSTPRSSKKFSV 545

Query: 325  DSTDCLQSMD------------GPVTRMKSRTKGHRSLSMDGDINNQTWMSPKEEALRQI 182
            +   C  S+D            G   +  S  KGH      GD    +  S KE ALRQ+
Sbjct: 546  NRCKCDISLDDDNFNAANCSECGLERKAYSPNKGH------GD--RPSAESRKETALRQL 597

Query: 181  KSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            K +M+ ++  Y+PPR   K ++GY+ Y RK   G + +   ADYYILLR+CA++ Q+D R
Sbjct: 598  KENMQENRFCYVPPRKYVKKKNGYIRYARK-KDGAYIYATHADYYILLRSCAKVAQVDAR 656


>ref|XP_002522432.1| conserved hypothetical protein [Ricinus communis]
            gi|223538317|gb|EEF39924.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 751

 Score =  134 bits (338), Expect = 4e-29
 Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 29/235 (12%)
 Frame = -3

Query: 619  RSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTS----F 452
            R+ S +Q+ ELD+ ELL HLE  Y+ +AD ++++KDL SYL+YCKDVV+AG   S     
Sbjct: 462  RNPSHMQMPELDSAELLHHLEVKYNFIADAYEFTKDLPSYLQYCKDVVFAGAGPSHMDDL 521

Query: 451  EEDNFIEQLWNLYETQEDIKPSVEPGTGCCI----PKRSRDEGNTI-------------- 326
            EE+  +E+LW+ Y+ ++D + + EP T         KRSR++  ++              
Sbjct: 522  EEEELMEKLWDFYQNEKDSELAKEPRTQSSSRLSNQKRSRNDDGSVFVNLSEKEKIKEEW 581

Query: 325  -DSTDC-LQSMDGPVTRMKSRTKGHRSLSMDGDINNQTWMSPKEE-----ALRQIKSDME 167
             DS    + S +   +  +S   GH S +   D N +      E+     A+R++K DME
Sbjct: 582  HDSPSADISSHNADNSSHQSFDNGHFSNNSLEDQNVEHKEKDSEKTLEGRAIRRLKLDME 641

Query: 166  LDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
             ++  Y+PPR   K R  Y+ Y RK   G + +VA ADYYILLR CAR+ Q+DIR
Sbjct: 642  ENRFCYIPPRVNLK-RFDYLHYVRKKDEGAFTYVAHADYYILLRACARVAQVDIR 695


>gb|AES89250.2| TATA box-binding protein associated factor RNA polymerase I subunit
           B-like protein [Medicago truncatula]
          Length = 641

 Score =  134 bits (336), Expect = 8e-29
 Identities = 90/209 (43%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
 Frame = -3

Query: 601 QISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTT---SFEEDNFIE 431
           Q  ELD T LL HL   Y+++AD H+YSKDL +YLKYCKDVV+AGL     S+EE N +E
Sbjct: 385 QKHELDCTGLLQHLHAIYNEIADTHEYSKDLPTYLKYCKDVVFAGLEPSLGSYEETNMME 444

Query: 430 QLWNLYETQEDIKPSVE--------PGTGCCIPKRSRDEGNTIDSTDCLQSMDGPVTRMK 275
            LW  Y+ +E+ KPS           GTG      SRDEG       C       V +  
Sbjct: 445 ILWKHYQNEENTKPSESEKQYHSSFSGTG------SRDEG-------C-------VGKTS 484

Query: 274 SRTKGHRSLSMDGDINNQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTR 95
            R K  R    D   +N +   P  EA+RQ+K DME ++  Y+PP S  + + GYV Y R
Sbjct: 485 KREKKKRKCLSD---DNPSGSLP--EAIRQLKLDMEENRFCYIPP-SVKQEKLGYVHYVR 538

Query: 94  KTMRGKWNFVADADYYILLRTCARLTQID 8
           K  +G  ++VA ADYYILLR  AR   +D
Sbjct: 539 KKDKGALSYVAHADYYILLRAFARAAHVD 567


>gb|KEH29974.1| TATA box-binding protein associated factor RNA polymerase I subunit
           B-like protein [Medicago truncatula]
          Length = 660

 Score =  134 bits (336), Expect = 8e-29
 Identities = 90/209 (43%), Positives = 115/209 (55%), Gaps = 11/209 (5%)
 Frame = -3

Query: 601 QISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTT---SFEEDNFIE 431
           Q  ELD T LL HL   Y+++AD H+YSKDL +YLKYCKDVV+AGL     S+EE N +E
Sbjct: 414 QKHELDCTGLLQHLHAIYNEIADTHEYSKDLPTYLKYCKDVVFAGLEPSLGSYEETNMME 473

Query: 430 QLWNLYETQEDIKPSVE--------PGTGCCIPKRSRDEGNTIDSTDCLQSMDGPVTRMK 275
            LW  Y+ +E+ KPS           GTG      SRDEG       C       V +  
Sbjct: 474 ILWKHYQNEENTKPSESEKQYHSSFSGTG------SRDEG-------C-------VGKTS 513

Query: 274 SRTKGHRSLSMDGDINNQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTR 95
            R K  R    D   +N +   P  EA+RQ+K DME ++  Y+PP S  + + GYV Y R
Sbjct: 514 KREKKKRKCLSD---DNPSGSLP--EAIRQLKLDMEENRFCYIPP-SVKQEKLGYVHYVR 567

Query: 94  KTMRGKWNFVADADYYILLRTCARLTQID 8
           K  +G  ++VA ADYYILLR  AR   +D
Sbjct: 568 KKDKGALSYVAHADYYILLRAFARAAHVD 596


>ref|XP_004507506.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Cicer arietinum]
          Length = 718

 Score =  132 bits (333), Expect = 2e-28
 Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 28/228 (12%)
 Frame = -3

Query: 601  QISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSF---EEDNFIE 431
            Q  ELD+T LL HL   Y+++    +YSKDL +YLKYC+DVV+AGL  S+   EE N ++
Sbjct: 437  QKPELDSTGLLQHLHAIYNEIEGTREYSKDLPTYLKYCRDVVFAGLEPSYGNHEEQNMMD 496

Query: 430  QLWNLYETQEDIKPSV---------------EPGTGCCIPKRSRDEGNTIDSTD-----C 311
             LWN Y+ +E+ KP                 + G+    PK+ + +    D        C
Sbjct: 497  NLWNFYQNEENSKPPELEKQHNNSFNQTGLRDEGSVRRTPKKQKSKRKCFDEPSPDEDIC 556

Query: 310  LQSMDGPVTRMKSRTKGHRSLSMDGDINNQ-----TWMSPKEEALRQIKSDMELDKLHYL 146
            L+S D P +   S      SL  D D ++      +  S  +EA+R++K DME ++  YL
Sbjct: 557  LES-DFPGS--LSNDDSFESLPDDEDSDSNEGDKGSGNSVVKEAIRELKLDMEENRFCYL 613

Query: 145  PPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            PP  KSK + GYV Y RK  +G   +VA ADYYILLR CAR+   DIR
Sbjct: 614  PPNVKSK-KFGYVHYIRKKDKGALIYVAHADYYILLRACARVAHDDIR 660


>ref|XP_010044748.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Eucalyptus grandis]
          Length = 730

 Score =  131 bits (330), Expect = 4e-28
 Identities = 88/250 (35%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
 Frame = -3

Query: 682  DVKEFDPIVDSCDTEMDRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLS 503
            DV+           ++D +  + +S    SE D  ELL +L   ++   D ++Y KDL +
Sbjct: 431  DVENGSGFFSGAGDDLDTRLEKEASDGDQSEFDAKELLRNLNARFNDFNDSYEYCKDLPT 490

Query: 502  YLKYCKDVVYAGLTTS---FEEDNFIEQLWNLYETQEDIKPSVEPG---TGCCIPKRSRD 341
            YL+YCKD+V+AGL  S   +EE   ++QLWN Y+  +D + +  PG    G    KR RD
Sbjct: 491  YLQYCKDIVFAGLEPSCEVYEEGEVMKQLWNFYQENKDGEQTERPGLHFDGAFNQKRPRD 550

Query: 340  EGNTIDSTDCLQSMDGPVTRMKSRT-KGHRSL--SMDGDINNQTWM-------------- 212
              N       + +      R+ S T   + SL  S D D ++Q+ +              
Sbjct: 551  NVNGCSKNSFIGN-----KRLNSGTSNANESLLDSTDDDASSQSSLADDNMKPSNHPSSE 605

Query: 211  SPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRT 32
            S ++ A+RQ+K DME ++  Y+PPR K K R  Y+ Y RK   G   +VA ADYYILLR 
Sbjct: 606  SYQDRAIRQLKLDMEENRFFYIPPRVKVK-RLDYLHYVRKRDHGALAYVAHADYYILLRA 664

Query: 31   CARLTQIDIR 2
            CAR+ Q++IR
Sbjct: 665  CARVAQVEIR 674


>ref|XP_008337501.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B [Malus domestica]
          Length = 699

 Score =  131 bits (330), Expect = 4e-28
 Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
 Frame = -3

Query: 619  RSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAG---LTTSFE 449
            R+SS  Q SELD  ELL  LE  Y+++AD ++Y KDL +YL++CKDVV+AG   L    +
Sbjct: 440  RNSSNAQSSELDAAELLSSLEARYNEIADSYEYCKDLPTYLQFCKDVVFAGSKSLLNDEK 499

Query: 448  EDNFIEQLWNLYETQEDIKPSVEPGTGCCIPKRSRDEGNTIDSTDCLQSMDGPV---TRM 278
            E+  IE LW  Y++ +D + +   G       R  ++    DS +C  + DG        
Sbjct: 500  EEELIESLWEFYQSGKDSETAAGKG---LFGDRDVEQKMLRDSDEC--ASDGTPFAGDHQ 554

Query: 277  KSRTKGHRSLSMDGDINN--QTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVC 104
            +++T  H   S      +      + K+EA+R++K DME  +  Y+PPR   K R  Y+ 
Sbjct: 555  RNKTGDHSCASSQNSHGSGANDAETLKDEAIRRMKLDMEEKRFCYIPPRVNLK-RFDYLH 613

Query: 103  YTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            Y RK   G + +VA ADYYILLR+CAR+ Q++IR
Sbjct: 614  YVRKKDEGAYTYVAHADYYILLRSCARVAQVEIR 647


>gb|KCW86852.1| hypothetical protein EUGRSUZ_B03445 [Eucalyptus grandis]
          Length = 720

 Score =  131 bits (330), Expect = 4e-28
 Identities = 88/250 (35%), Positives = 130/250 (52%), Gaps = 23/250 (9%)
 Frame = -3

Query: 682  DVKEFDPIVDSCDTEMDRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLS 503
            DV+           ++D +  + +S    SE D  ELL +L   ++   D ++Y KDL +
Sbjct: 421  DVENGSGFFSGAGDDLDTRLEKEASDGDQSEFDAKELLRNLNARFNDFNDSYEYCKDLPT 480

Query: 502  YLKYCKDVVYAGLTTS---FEEDNFIEQLWNLYETQEDIKPSVEPG---TGCCIPKRSRD 341
            YL+YCKD+V+AGL  S   +EE   ++QLWN Y+  +D + +  PG    G    KR RD
Sbjct: 481  YLQYCKDIVFAGLEPSCEVYEEGEVMKQLWNFYQENKDGEQTERPGLHFDGAFNQKRPRD 540

Query: 340  EGNTIDSTDCLQSMDGPVTRMKSRT-KGHRSL--SMDGDINNQTWM-------------- 212
              N       + +      R+ S T   + SL  S D D ++Q+ +              
Sbjct: 541  NVNGCSKNSFIGN-----KRLNSGTSNANESLLDSTDDDASSQSSLADDNMKPSNHPSSE 595

Query: 211  SPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRT 32
            S ++ A+RQ+K DME ++  Y+PPR K K R  Y+ Y RK   G   +VA ADYYILLR 
Sbjct: 596  SYQDRAIRQLKLDMEENRFFYIPPRVKVK-RLDYLHYVRKRDHGALAYVAHADYYILLRA 654

Query: 31   CARLTQIDIR 2
            CAR+ Q++IR
Sbjct: 655  CARVAQVEIR 664


>ref|XP_010046659.1| PREDICTED: LOW QUALITY PROTEIN: TATA box-binding protein-associated
            factor RNA polymerase I subunit B-like [Eucalyptus
            grandis]
          Length = 1007

 Score =  131 bits (329), Expect = 5e-28
 Identities = 90/240 (37%), Positives = 126/240 (52%), Gaps = 22/240 (9%)
 Frame = -3

Query: 655  DSCDTEMDRKPSRSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVV 476
            D  DT ++ + S        SE D  ELL +L   Y+   D ++Y KDL +YL+YCKDVV
Sbjct: 744  DDLDTRLEAEASDGDK----SEFDAKELLRNLNARYNDFNDSYEYCKDLPTYLQYCKDVV 799

Query: 475  YAGLTTS--FEEDNFIEQLWNLYETQEDIKPSVEPG---TGCCIPKRSRDEGNTIDSTDC 311
            +AGL     +EE   ++QLWN Y+  +D + +  PG    G    KR RD  N       
Sbjct: 800  FAGLEPCEVYEEGEVMKQLWNFYQENKDGEQTEGPGLHFDGAFNQKRPRDHVNGCSKNSF 859

Query: 310  LQSMDGPVTRMKSRTKG-HRSL--SMDGDINNQTWM--------------SPKEEALRQI 182
            + +      R  S T G + SL  S D D ++Q+ +              S ++ A+RQ+
Sbjct: 860  IGN-----KRFNSGTSGANESLLDSTDDDASSQSSLADDNMKPGNRPSSESYQDRAIRQL 914

Query: 181  KSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            K DME ++  Y+PPR K K R  Y+ Y RK   G   +VA ADYYILLR CAR+ Q++IR
Sbjct: 915  KLDMEENRFFYIPPRVKVK-RLDYLHYVRKRDHGALAYVAHADYYILLRACARVAQVEIR 973



 Score = 98.2 bits (243), Expect = 5e-18
 Identities = 68/195 (34%), Positives = 98/195 (50%), Gaps = 23/195 (11%)
 Frame = -3

Query: 526  DYSKDLLSYLKYCKDVVYAGLTTS---FEEDNFIEQLWNLYETQEDIKPSVEPGT---GC 365
            +Y KDL +Y +YCKDVV+AGL  S   ++E   ++QLWN Y+  +D + +   G    G 
Sbjct: 454  EYCKDLPTYFQYCKDVVFAGLEPSCEVYKEGEVVKQLWNFYQENKDGEQTEGLGLHFDGA 513

Query: 364  CIPKRSRDEGNTIDSTDCLQSMDGPVTRMKSRTKG---------HRSLSMDGDI------ 230
               KR RD  N      C ++      R+ S T           H   S+   +      
Sbjct: 514  FNQKRPRDNVN-----GCSKNSFIGTKRLNSGTSDANESLLDSTHDDASLQSSLVDDNMK 568

Query: 229  --NNQTWMSPKEEALRQIKSDMELDKLHYLPPRSKSKNRSGYVCYTRKTMRGKWNFVADA 56
              N  +  S ++ A+ Q+K +ME ++  Y+PPR K K R  Y+ Y RK   G   +VA A
Sbjct: 569  PSNRPSSESYQDRAIGQLKLEMEENRFFYIPPRVKVK-RLDYLHYVRKRDHGALAYVAHA 627

Query: 55   DYYILLRTCARLTQI 11
            DYYILLR CAR+ Q+
Sbjct: 628  DYYILLRACARVAQL 642


>ref|XP_009391050.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X2 [Musa acuminata subsp.
            malaccensis]
          Length = 740

 Score =  130 bits (328), Expect = 6e-28
 Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
 Frame = -3

Query: 619  RSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDN 440
            ++ S I+ ++ +T ELL  L+ A+DK++  HDYS+DL SYLKYC+DVV+ G+TTS++E  
Sbjct: 483  KNMSSIKSADFNTKELLDILQAAHDKISTAHDYSRDLRSYLKYCQDVVFGGMTTSYDEQT 542

Query: 439  FIEQLWNLYETQED------IKPSVEPGTGCCIPKRSRDEGNT--IDSTDCLQSMDGP-V 287
             IE+ W  Y+ QED      +K  +    G    KR R+   T   D     QS     +
Sbjct: 543  LIERFWETYDKQEDDIQQEGLKDELLDSKG----KRQREVPATSFFDFKRREQSKSSQHI 598

Query: 286  TRMKSRTKGHRSLSMDGDIN-----------NQTWMSPKEEALRQIKSDMELDKLHYLPP 140
             R +S      + S DG  N           N +    +  A+ ++K  ME    +YLPP
Sbjct: 599  IRERSPDDYGGTTSRDGFANSADPNEKDPLCNSSLTPSRNAAVERMKLSMEESGFYYLPP 658

Query: 139  RSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            R + K   GY+ Y RK + GK   VA ADYYI+LR CA++ Q+D+R
Sbjct: 659  RVQ-KRTDGYLHYKRKRLDGKLICVAHADYYIVLRACAKVAQVDMR 703


>ref|XP_009391049.1| PREDICTED: TATA box-binding protein-associated factor RNA polymerase
            I subunit B isoform X1 [Musa acuminata subsp.
            malaccensis]
          Length = 742

 Score =  130 bits (328), Expect = 6e-28
 Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
 Frame = -3

Query: 619  RSSSPIQISELDTTELLCHLEKAYDKLADVHDYSKDLLSYLKYCKDVVYAGLTTSFEEDN 440
            ++ S I+ ++ +T ELL  L+ A+DK++  HDYS+DL SYLKYC+DVV+ G+TTS++E  
Sbjct: 485  KNMSSIKSADFNTKELLDILQAAHDKISTAHDYSRDLRSYLKYCQDVVFGGMTTSYDEQT 544

Query: 439  FIEQLWNLYETQED------IKPSVEPGTGCCIPKRSRDEGNT--IDSTDCLQSMDGP-V 287
             IE+ W  Y+ QED      +K  +    G    KR R+   T   D     QS     +
Sbjct: 545  LIERFWETYDKQEDDIQQEGLKDELLDSKG----KRQREVPATSFFDFKRREQSKSSQHI 600

Query: 286  TRMKSRTKGHRSLSMDGDIN-----------NQTWMSPKEEALRQIKSDMELDKLHYLPP 140
             R +S      + S DG  N           N +    +  A+ ++K  ME    +YLPP
Sbjct: 601  IRERSPDDYGGTTSRDGFANSADPNEKDPLCNSSLTPSRNAAVERMKLSMEESGFYYLPP 660

Query: 139  RSKSKNRSGYVCYTRKTMRGKWNFVADADYYILLRTCARLTQIDIR 2
            R + K   GY+ Y RK + GK   VA ADYYI+LR CA++ Q+D+R
Sbjct: 661  RVQ-KRTDGYLHYKRKRLDGKLICVAHADYYIVLRACAKVAQVDMR 705


Top