BLASTX nr result
ID: Cinnamomum25_contig00027316
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00027316
(317 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ERN02875.1| hypothetical protein AMTR_s00334p00015220 [Ambore... 109 8e-22
ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chlorop... 108 1e-21
ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag... 108 2e-21
ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicag... 108 2e-21
gb|AKM98081.1| photosystem I assembly protein Ycf3 (chloroplast)... 106 5e-21
ref|YP_009144628.1| photosystem I assembly protein Ycf3 (chlorop... 106 5e-21
ref|YP_009142051.1| Ycf3 (chloroplast) [Fagopyrum tataricum] gi|... 106 5e-21
ref|YP_009123253.1| photosystem I assembly protein ycf3 (chlorop... 106 5e-21
ref|YP_009115896.1| hypothetical chloroplast RF34 [Scrophularia ... 106 5e-21
ref|YP_009115683.1| hypothetical chloroplast RF34 [Lysimachia co... 106 5e-21
gb|AIZ57534.1| photosystem I assembly protein Ycf3 (chloroplast)... 106 5e-21
gb|AIW51848.1| photosystem I assembly protein Ycf3 (chloroplast)... 106 5e-21
gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume... 106 5e-21
gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis] 106 5e-21
ref|YP_009048111.1| photosystem I assembly protein Ycf3 (chlorop... 106 5e-21
gb|ADD30872.1| putative RF3 protein (chloroplast) [Heuchera sang... 106 5e-21
gb|ADD30856.1| putative RF3 protein (chloroplast) [Dillenia indica] 106 5e-21
ref|YP_004935667.1| ycf3 gene product (chloroplast) [Sesamum ind... 106 5e-21
ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyr... 106 5e-21
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ... 106 5e-21
>gb|ERN02875.1| hypothetical protein AMTR_s00334p00015220 [Amborella trichopoda]
Length = 70
Score = 109 bits (272), Expect = 8e-22
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -3
Query: 309 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQA+ALTPGNYIEA NWLKI RRFE
Sbjct: 18 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQNWLKITRRFE 70
>ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
stramonium] gi|350996427|gb|AEQ36939.1| photosystem I
assembly protein Ycf3 (chloroplast) [Datura stramonium]
gi|350996579|gb|AEQ37090.1| photosystem I assembly
protein Ycf3 [Datura stramonium]
Length = 170
Score = 108 bits (271), Expect = 1e-21
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -3
Query: 309 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
YS RGEQAI+QGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 118 YSGRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 170
>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
Length = 160
Score = 108 bits (269), Expect = 2e-21
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = -3
Query: 312 TYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKI RFE
Sbjct: 107 TYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 160
>ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
gi|355495957|gb|AES77160.1| photosystem I assembly
protein ycf3 [Medicago truncatula]
Length = 70
Score = 108 bits (269), Expect = 2e-21
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = -3
Query: 312 TYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLKI RFE
Sbjct: 17 TYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITGRFE 70
>gb|AKM98081.1| photosystem I assembly protein Ycf3 (chloroplast) [Anemone patens]
gi|844170208|gb|AKM98169.1| photosystem I assembly
protein Ycf3 (chloroplast) [Anemone patens]
gi|844170334|gb|AKM98257.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla pratensis]
gi|844170456|gb|AKM98345.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla pratensis]
gi|844170588|gb|AKM98433.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla vernalis]
gi|844170729|gb|AKM98521.1| photosystem I assembly
protein Ycf3 (chloroplast) [Pulsatilla vernalis]
Length = 172
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 123 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 172
>ref|YP_009144628.1| photosystem I assembly protein Ycf3 (chloroplast) [Scutellaria
baicalensis] gi|827345839|gb|AKJ77140.1| photosystem I
assembly protein Ycf3 (chloroplast) [Scutellaria
baicalensis]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>ref|YP_009142051.1| Ycf3 (chloroplast) [Fagopyrum tataricum]
gi|723430240|gb|AIX89744.1| Ycf3 (chloroplast)
[Fagopyrum tataricum]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>ref|YP_009123253.1| photosystem I assembly protein ycf3 (chloroplast) [Chloranthus
japonicus] gi|756761868|gb|AJM69983.1| photosystem I
assembly protein ycf3 (chloroplast) [Chloranthus
japonicus]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_009115896.1| hypothetical chloroplast RF34 [Scrophularia takesimensis]
gi|752789787|ref|YP_009117222.1| hypothetical
chloroplast RF34 (chloroplast) [Premna microphylla]
gi|744673740|gb|AJD00725.1| hypothetical chloroplast
RF34 [Scrophularia takesimensis]
gi|748013905|gb|AJE28375.1| hypothetical chloroplast
RF34 (chloroplast) [Premna microphylla]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>ref|YP_009115683.1| hypothetical chloroplast RF34 [Lysimachia coreana]
gi|743182465|gb|AJC00270.1| hypothetical chloroplast
RF34 [Lysimachia coreana]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>gb|AIZ57534.1| photosystem I assembly protein Ycf3 (chloroplast) [Clematis fusca
var. coreana]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|AIW51848.1| photosystem I assembly protein Ycf3 (chloroplast) [Lasthenia
burkei]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169
>gb|AIP85231.1| Ycf3 (chloroplast) [Camellia sinensis]
Length = 126
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 77 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 126
>ref|YP_009048111.1| photosystem I assembly protein Ycf3 (chloroplast) [Primula
poissonii] gi|573015159|gb|AHF71741.1| photosystem I
assembly protein Ycf3 (chloroplast) [Primula poissonii]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|ADD30872.1| putative RF3 protein (chloroplast) [Heuchera sanguinea]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>gb|ADD30856.1| putative RF3 protein (chloroplast) [Dillenia indica]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_004935667.1| ycf3 gene product (chloroplast) [Sesamum indicum]
gi|558603867|ref|YP_008815938.1| photosystem I assembly
protein Ycf3 (chloroplast) [Lindenbergia philippensis]
gi|575669211|ref|YP_008964868.1| photosystem I assembly
protein Ycf3 (chloroplast) [Schwalbea americana]
gi|290488940|gb|ADD30854.1| putative RF3 protein
(chloroplast) [Antirrhinum majus]
gi|347448296|gb|AEO92707.1| photosystem I assembly
protein Ycf3 (chloroplast) [Sesamum indicum]
gi|496538602|gb|AGL45337.1| Ycf3 (chloroplast) [Sesamum
indicum] gi|557136864|emb|CDI43919.1| photosystem I
assembly protein Ycf3 (chloroplast) [Lindenbergia
philippensis] gi|560176701|emb|CDJ38620.1| photosystem I
assembly protein Ycf3 (chloroplast) [Schwalbea
americana] gi|576598280|gb|AHH30442.1| hypothetical
chloroplast RF3 (chloroplast) [Bartsia inaequalis]
gi|766544172|gb|AJS14422.1| hypothetical chloroplast
RF34 [Ruellia breedlovei]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_001936518.2| photosystem I assembly protein ycf3 [Fagopyrum esculentum subsp.
ancestrale]
Length = 168
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 168
>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
gi|403226782|gb|AFR25661.1| hypothetical chloroplast
RF34 (chloroplast) [Penthorum chinense]
Length = 169
Score = 106 bits (265), Expect = 5e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 300 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKIARRFE 151
RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKI RRFE
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITRRFE 169