BLASTX nr result
ID: Cinnamomum25_contig00027239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00027239
(230 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana] 141 2e-31
gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis bellad... 140 4e-31
ref|YP_002000577.1| ribosomal protein S13 (mitochondrion) [Oryza... 138 2e-30
gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata] 137 2e-30
dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana... 137 2e-30
gb|ABW98661.1| ribosomal protein S13 [Malus domestica] 137 2e-30
ref|YP_008802501.1| ribosomal protein S13 (mitochondrion) (mitoc... 137 3e-30
gb|AAW30358.1| ribosomal protein S13 [Lonicera sp. Bergthorsson ... 136 5e-30
gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudo... 136 5e-30
ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus] gi... 135 8e-30
dbj|BAD66720.1| ribosomal protein S13 (mitochondrion) [Beta vulg... 135 1e-29
sp|P23209.1|RT13_DAUCA RecName: Full=Ribosomal protein S13, mito... 135 1e-29
ref|YP_004935351.1| ribosomal protein S13 (mitochondrion) [Silen... 135 1e-29
ref|NP_064014.2| rps13 gene product (mitochondrion) [Beta vulgar... 135 1e-29
ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays] gi... 134 2e-29
dbj|BAJ22102.1| ribosomal protein S13 [Cycas taitungensis] 134 2e-29
gb|AKE34084.1| ribosomal protein S13, partial (mitochondrion) [F... 133 5e-29
gb|AHF22603.1| ribosomal protein S13, partial (mitochondrion) [F... 133 5e-29
ref|YP_008999583.1| ribosomal protein S13 (mitochondrion) [Vacci... 133 5e-29
gb|AHC94308.1| ribosomal protein S13, partial (mitochondrion) [A... 132 9e-29
>emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana]
Length = 116
Score = 141 bits (356), Expect = 2e-31
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna]
Length = 116
Score = 140 bits (352), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+NELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKINELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|YP_002000577.1| ribosomal protein S13 (mitochondrion) [Oryza sativa Japonica Group]
gi|60498746|dbj|BAC19882.2| Ribosomal protein S13
(mitochondrion) [Oryza sativa Japonica Group]
Length = 116
Score = 138 bits (347), Expect = 2e-30
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
+CYRLGISGNIKMNELTKYQIDQIEQMI QDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 LCYRLGISGNIKMNELTKYQIDQIEQMIAQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata]
Length = 116
Score = 137 bits (346), Expect = 2e-30
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+NELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKINELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDG PLR
Sbjct: 93 QDGSPLR 99
>dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana tabacum]
Length = 116
Score = 137 bits (346), Expect = 2e-30
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>gb|ABW98661.1| ribosomal protein S13 [Malus domestica]
Length = 116
Score = 137 bits (346), Expect = 2e-30
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|YP_008802501.1| ribosomal protein S13 (mitochondrion) (mitochondrion) [Asclepias
syriaca] gi|556562340|gb|AGZ63036.1| ribosomal protein
S13 (mitochondrion) (mitochondrion) [Asclepias syriaca]
Length = 116
Score = 137 bits (345), Expect = 3e-30
Identities = 64/67 (95%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+NELTKYQIDQIEQMIGQDHVVHWELKRGERADIER ISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKINELTKYQIDQIEQMIGQDHVVHWELKRGERADIERFISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLP+R
Sbjct: 93 QDGLPVR 99
>gb|AAW30358.1| ribosomal protein S13 [Lonicera sp. Bergthorsson 0301]
Length = 107
Score = 136 bits (343), Expect = 5e-30
Identities = 64/67 (95%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+ ELTKYQIDQ+EQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 29 VCYRLGISGNIKIKELTKYQIDQMEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 88
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 89 QDGLPLR 95
>gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus]
Length = 116
Score = 136 bits (343), Expect = 5e-30
Identities = 64/67 (95%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+NELTKYQIDQIEQMIGQDHVVHWE +RGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKINELTKYQIDQIEQMIGQDHVVHWEWRRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus]
gi|259156787|gb|ACV96649.1| ribosomal protein S13
[Citrullus lanatus]
Length = 116
Score = 135 bits (341), Expect = 8e-30
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+ ELTKYQIDQIEQMIGQDH+VHWELKRGERADIER ISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKIKELTKYQIDQIEQMIGQDHIVHWELKRGERADIERFISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>dbj|BAD66720.1| ribosomal protein S13 (mitochondrion) [Beta vulgaris subsp.
vulgaris] gi|54606741|dbj|BAD66764.1| ribosomal protein
S13 (mitochondrion) [Beta vulgaris subsp. vulgaris]
Length = 116
Score = 135 bits (339), Expect = 1e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGIS NIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISDNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>sp|P23209.1|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial (mitochondrion)
[Daucus carota]
Length = 116
Score = 135 bits (339), Expect = 1e-29
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGISGNIK+ ELTKYQIDQ+EQMIGQDHVVHWELKRGERADIER ISISCYRGIRH
Sbjct: 33 VCYRLGISGNIKIKELTKYQIDQMEQMIGQDHVVHWELKRGERADIERFISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|YP_004935351.1| ribosomal protein S13 (mitochondrion) [Silene vulgaris]
gi|344228017|gb|AEM46202.1| ribosomal protein S13
(mitochondrion) [Silene vulgaris]
gi|385198457|gb|AFI44338.1| ribosomal protein S13
(mitochondrion) [Silene vulgaris]
Length = 116
Score = 135 bits (339), Expect = 1e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGIS NIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISDNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|NP_064014.2| rps13 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435141|ref|YP_004222359.1| ribosomal protein S13
[Beta vulgaris subsp. maritima]
gi|346683232|ref|YP_004842164.1| ribosomal protein S13
[Beta macrocarpa] gi|87248054|gb|ABD36081.1| ribosomal
protein S13 (mitochondrion) [Beta vulgaris subsp.
vulgaris] gi|148491419|dbj|BAA99325.2| ribosomal protein
S13 (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|317905591|emb|CBJ14001.1| ribosomal protein S13 [Beta
vulgaris subsp. maritima] gi|319439874|emb|CBJ17577.1|
ribosomal protein S13 [Beta vulgaris subsp. maritima]
gi|320148028|emb|CBJ20692.1| ribosomal protein S13 [Beta
vulgaris subsp. maritima] gi|345500150|emb|CBX24969.1|
ribosomal protein S13 [Beta macrocarpa]
gi|384977924|emb|CBL54148.1| ribosomal protein S13
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 116
Score = 135 bits (339), Expect = 1e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGIS NIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISDNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays]
gi|40795090|gb|AAR91134.1| ribosomal protein S13
(mitochondrion) [Zea mays]
Length = 116
Score = 134 bits (338), Expect = 2e-29
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
+CYRLGISGNIK++ELTKYQIDQIEQMI QDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 LCYRLGISGNIKIHELTKYQIDQIEQMIAQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>dbj|BAJ22102.1| ribosomal protein S13 [Cycas taitungensis]
Length = 150
Score = 134 bits (337), Expect = 2e-29
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VCYRLGIS NIK+NELTKYQIDQIEQ+IGQDHVVHWELKRG+RADIERLISISCYRGIRH
Sbjct: 33 VCYRLGISDNIKVNELTKYQIDQIEQIIGQDHVVHWELKRGKRADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>gb|AKE34084.1| ribosomal protein S13, partial (mitochondrion) [Fragaria
virginiana]
Length = 116
Score = 133 bits (334), Expect = 5e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
V YRLGISGNIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VRYRLGISGNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>gb|AHF22603.1| ribosomal protein S13, partial (mitochondrion) [Fragaria iinumae]
gi|571034303|gb|AHF22604.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria mandshurica]
gi|571034305|gb|AHF22605.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria vesca subsp.
bracteata] gi|571034307|gb|AHF22606.1| ribosomal protein
S13, partial (mitochondrion) [Fragaria chiloensis]
gi|571034309|gb|AHF22607.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria virginiana]
gi|571034311|gb|AHF22608.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria vesca subsp. vesca]
gi|571034313|gb|AHF22609.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria vesca subsp.
bracteata] gi|571034315|gb|AHF22610.1| ribosomal protein
S13, partial (mitochondrion) [Fragaria vesca subsp.
bracteata] gi|814607129|gb|AKE34080.1| ribosomal protein
S13, partial (mitochondrion) [Fragaria mandshurica]
gi|814607131|gb|AKE34081.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria vesca subsp.
bracteata] gi|814607133|gb|AKE34082.1| ribosomal protein
S13, partial (mitochondrion) [Fragaria iinumae]
gi|814607135|gb|AKE34083.1| ribosomal protein S13,
partial (mitochondrion) [Fragaria vesca subsp.
bracteata] gi|814607139|gb|AKE34085.1| ribosomal protein
S13, partial (mitochondrion) [Fragaria chiloensis]
Length = 116
Score = 133 bits (334), Expect = 5e-29
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
V YRLGISGNIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH
Sbjct: 33 VRYRLGISGNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 92
Query: 50 QDGLPLR 30
QDGLPLR
Sbjct: 93 QDGLPLR 99
>ref|YP_008999583.1| ribosomal protein S13 (mitochondrion) [Vaccinium macrocarpon]
gi|549531658|gb|AGX28797.1| ribosomal protein S13
(mitochondrion) [Vaccinium macrocarpon]
Length = 116
Score = 133 bits (334), Expect = 5e-29
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
+CYRLGISGNIK+ ELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLI+ISCYRGIRH
Sbjct: 33 ICYRLGISGNIKIKELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLINISCYRGIRH 92
Query: 50 QDGLPLR 30
QD LPLR
Sbjct: 93 QDRLPLR 99
>gb|AHC94308.1| ribosomal protein S13, partial (mitochondrion) [Amborella
trichopoda]
Length = 102
Score = 132 bits (332), Expect = 9e-29
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = -1
Query: 230 VCYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRH 51
VC RLGISGNIKMNELTKYQID++EQMIGQDHVVHWE KRGERADIERLISISCYRGIRH
Sbjct: 26 VCSRLGISGNIKMNELTKYQIDKMEQMIGQDHVVHWEFKRGERADIERLISISCYRGIRH 85
Query: 50 QDGLPLR 30
+DGLPLR
Sbjct: 86 KDGLPLR 92