BLASTX nr result

ID: Cinnamomum25_contig00027083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00027083
         (293 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010922370.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-11
ref|XP_011624530.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
ref|XP_010091451.1| hypothetical protein L484_000760 [Morus nota...    59   1e-06
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...    57   4e-06
ref|XP_008242732.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...    56   8e-06

>ref|XP_010922370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Elaeis guineensis]
          Length = 593

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 47/97 (48%), Positives = 60/97 (61%)
 Frame = -2

Query: 292 SSSPLPQPTLKTAFADRKTANLHPETAIYHQPSTLSEIKQLHAHLIKTGLSQNHHAQNRL 113
           +S PLP+P  +           +PE+     P+TLSEIKQL A LIK GL+    AQNRL
Sbjct: 7   TSPPLPRPRPQ-----------YPESL--DGPTTLSEIKQLQAVLIKAGLAHTRPAQNRL 53

Query: 112 LSSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           ++ C   R  P  ALD+ALLLFS+S  PTPF+RN I+
Sbjct: 54  VALCSAARP-PDPALDHALLLFSRSRKPTPFMRNTIV 89


>ref|XP_011624530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Amborella trichopoda]
          Length = 623

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 45/118 (38%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
 Frame = -2

Query: 289 SSPLPQPTLKTAFADRKTA---------NLHPET-------------AIYHQPSTLSEIK 176
           S PLPQ   KT  A  KT           LHPE              ++  Q +T+SE+K
Sbjct: 8   SPPLPQTCFKTTSATSKTTFPSPKLVSPKLHPENPQRENPPRLLETISLIDQCTTMSELK 67

Query: 175 QLHAHLIKTGLSQNHHAQNRLLSSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           QLHA L KTG S+N  AQNRL   C +   +  A   YAL L   S + + F+ N II
Sbjct: 68  QLHARLFKTGFSENRFAQNRLTVICTRPCINDMA---YALQLQKHSPHKSGFMENTII 122


>ref|XP_010091451.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|703120676|ref|XP_010102153.1| hypothetical protein
           L484_021387 [Morus notabilis]
           gi|587854450|gb|EXB44509.1| hypothetical protein
           L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 286 SPLPQPTLKTAFADRKTANLHPETAIYHQP-STLSEIKQLHAHLIKTGLSQNHHAQNRLL 110
           +P P PT    F   +     P  ++  +  +T+S+++++HAHLIKTGL  +  A +RLL
Sbjct: 11  TPSPSPTSIAKFISDQ-----PHLSMLEKRCATMSDLRKIHAHLIKTGLISHTIASSRLL 65

Query: 109 SSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           + C    + PA  ++YAL++FSQ   P  FI N II
Sbjct: 66  AFC----ASPAGNINYALMVFSQIQNPNLFIWNTII 97


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
 Frame = -2

Query: 286 SPLPQPTLKTAF-ADRKTANLHPETAIYHQPSTLSEIKQLHAHLIKTGLSQNHHAQNRLL 110
           S +P PT  + F +D+   +L     +  Q +++ ++K++HAHLIKTGL+++  A +R+L
Sbjct: 5   SQIPSPTSMSKFISDQPLLSL-----LDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRIL 59

Query: 109 SSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           + C    + PA  ++YA L+F+Q   P  FI N II
Sbjct: 60  TFC----TSPAGDINYAYLVFTQIKKPNLFIWNTII 91


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = -2

Query: 286 SPLPQPTLKTAF-ADRKTANLHPETAIYHQPSTLSEIKQLHAHLIKTGLSQNHHAQNRLL 110
           S +P PT  + F +D+   +L     +  Q +++ ++K++HAHLIKTGL ++  A +R+L
Sbjct: 5   SQIPSPTSMSKFISDQPLLSL-----LDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRIL 59

Query: 109 SSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           + C    + PA  ++YA L+F+Q   P  FI N II
Sbjct: 60  AFC----TSPAGDINYAYLVFTQIKKPNLFIWNTII 91


>ref|XP_008242732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Prunus mume]
          Length = 739

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
 Frame = -2

Query: 292 SSSPLPQPTLKTAFADRKTAN-------LHPETAIYHQPSTLSEIKQLHAHLIKTGLSQN 134
           SSS L  P L + F    T++        HP   +  +   +  +KQ+HAH+IKTGL   
Sbjct: 5   SSSLLSLPILPSTFHVLPTSDPPYKLLQTHPSLTLLSKCKNMQNLKQVHAHIIKTGLHNT 64

Query: 133 HHAQNRLLSSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           H A ++L+  C  +   P   L YALL+F     P   I N II
Sbjct: 65  HFALSKLVEFCAVS---PFGDLSYALLVFQSIENPNQIIWNTII 105


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508783730|gb|EOY30986.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 847

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 33/97 (34%), Positives = 47/97 (48%)
 Frame = -2

Query: 292 SSSPLPQPTLKTAFADRKTANLHPETAIYHQPSTLSEIKQLHAHLIKTGLSQNHHAQNRL 113
           S SP P   L ++    K    HP  ++  +  T+  +KQ+H H+IKTGL     A ++L
Sbjct: 67  SISPFPLHLLPSSDPPYKLLQNHPSLSLLSKCRTIQTLKQVHCHIIKTGLHHTQFALSKL 126

Query: 112 LSSCLQNRSHPAAALDYALLLFSQSSYPTPFIRNNII 2
           +  C  +   P   L YALLLF     P   I N +I
Sbjct: 127 IEFCAVS---PFGDLPYALLLFESIDEPNQVIWNTMI 160


Top