BLASTX nr result

ID: Cinnamomum25_contig00026252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00026252
         (990 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008790339.1| PREDICTED: uncharacterized protein LOC103707...    69   5e-09
ref|XP_008790331.1| PREDICTED: uncharacterized protein LOC103707...    69   5e-09
ref|XP_010917935.1| PREDICTED: nuclear pore complex protein NUP1...    64   2e-07
ref|XP_010917934.1| PREDICTED: nuclear pore complex protein NUP1...    64   2e-07
ref|XP_010908640.1| PREDICTED: nuclear pore complex protein NUP1...    63   4e-07
ref|XP_008810621.1| PREDICTED: uncharacterized protein DDB_G0274...    58   9e-06

>ref|XP_008790339.1| PREDICTED: uncharacterized protein LOC103707572 isoform X2 [Phoenix
            dactylifera]
          Length = 1229

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
 Frame = +3

Query: 180  PPQLSSLFNKSTPKEQPVIT---MFGSKSTKKGPAFTFSSTSNNINGASGTKSIDSNCEI 350
            PP+ + L  +STP+++ +      FGSK  +  P    SST   ++  +  K   SN   
Sbjct: 712  PPRPAPLVERSTPRKEEIAGHTFKFGSKDAESSP---LSSTMAAVSNPASLKFGASN--- 765

Query: 351  MKSXXXXXXXXXXXXGSGKNEKNLKSRDPKKSSENAITGISTSATPKIFSFGVSTNSNQS 530
                               N  + K+ D  KS  N ++G+S+S +P +F+FG ST    S
Sbjct: 766  ------DAPETLLDRSKLDNGGDQKAGDVFKSCGNPVSGLSSSTSPVLFAFGASTTPTLS 819

Query: 531  NGSLTTVPLFSVNAAPEAPTFGSSTSLIFHXXXXXXXXXXXXXXXXTAVPVFSASSAFKF 710
            NGSLT     SV +A  A TF  + +                    +A PVFS   +F+F
Sbjct: 820  NGSLTAASSTSVISAAPAMTFSDNLATSVFSTSIITSTSSGSPTVSSATPVFSTVPSFQF 879

Query: 711  GAG 719
            G+G
Sbjct: 880  GSG 882


>ref|XP_008790331.1| PREDICTED: uncharacterized protein LOC103707572 isoform X1 [Phoenix
            dactylifera]
          Length = 1231

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 3/183 (1%)
 Frame = +3

Query: 180  PPQLSSLFNKSTPKEQPVIT---MFGSKSTKKGPAFTFSSTSNNINGASGTKSIDSNCEI 350
            PP+ + L  +STP+++ +      FGSK  +  P    SST   ++  +  K   SN   
Sbjct: 714  PPRPAPLVERSTPRKEEIAGHTFKFGSKDAESSP---LSSTMAAVSNPASLKFGASN--- 767

Query: 351  MKSXXXXXXXXXXXXGSGKNEKNLKSRDPKKSSENAITGISTSATPKIFSFGVSTNSNQS 530
                               N  + K+ D  KS  N ++G+S+S +P +F+FG ST    S
Sbjct: 768  ------DAPETLLDRSKLDNGGDQKAGDVFKSCGNPVSGLSSSTSPVLFAFGASTTPTLS 821

Query: 531  NGSLTTVPLFSVNAAPEAPTFGSSTSLIFHXXXXXXXXXXXXXXXXTAVPVFSASSAFKF 710
            NGSLT     SV +A  A TF  + +                    +A PVFS   +F+F
Sbjct: 822  NGSLTAASSTSVISAAPAMTFSDNLATSVFSTSIITSTSSGSPTVSSATPVFSTVPSFQF 881

Query: 711  GAG 719
            G+G
Sbjct: 882  GSG 884


>ref|XP_010917935.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X2 [Elaeis
            guineensis]
          Length = 1352

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 7/205 (3%)
 Frame = +3

Query: 126  FASTISSAADTVKPTPPMPPQLSSLFNKSTPKEQPVITM---FGSKSTKKGP-AFTFSST 293
            F +   S+  +  P+PPMP   + L  +S  +++ +      FGSK  +  P + T ++ 
Sbjct: 701  FPTASPSSISSQTPSPPMP---TPLLERSAQRKEEIAGRTFKFGSKDAQSSPLSSTMTAV 757

Query: 294  SNNINGASGTKSIDSNCEIMKSXXXXXXXXXXXXGSGKNEK--NLKSRDPKKSSENAITG 467
            SN ++   G                            K+++  +LK+ D  KS  NA + 
Sbjct: 758  SNPVSPTFGASDAPETL----------------LDGSKSDRGGDLKAGDVFKSCGNAASS 801

Query: 468  I-STSATPKIFSFGVSTNSNQSNGSLTTVPLFSVNAAPEAPTFGSSTSLIFHXXXXXXXX 644
            + S+S++P +F+FG ST   QSNGSLTT     V +A  A  F  ++             
Sbjct: 802  VLSSSSSPVLFAFGASTTPTQSNGSLTTASSMPVISAAPAMKFSDNSVTSVFSTSIVTST 861

Query: 645  XXXXXXXXTAVPVFSASSAFKFGAG 719
                    +A PV S   +F+FG+G
Sbjct: 862  SSGSPTISSATPVSSTVPSFQFGSG 886


>ref|XP_010917934.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X1 [Elaeis
            guineensis]
          Length = 1353

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
 Frame = +3

Query: 126  FASTISSAADTVKPTPPMPPQLSSLFNKSTPKEQPVITM---FGSKSTKKGP-AFTFSST 293
            F +   S+  +  P+PPMP   + L  +S  +++ +      FGSK  +  P + T ++ 
Sbjct: 701  FPTASPSSISSQTPSPPMP---TPLLERSAQRKEEIAGRTFKFGSKDAQSSPLSSTMTAV 757

Query: 294  SNNINGASGTKSIDSNCEIMKSXXXXXXXXXXXXGSGKNEK--NLKSRDPKKSSENAITG 467
            SN ++   G  +                         K+++  +LK+ D  KS  NA + 
Sbjct: 758  SNPVSPTFGASN---------------DAPETLLDGSKSDRGGDLKAGDVFKSCGNAASS 802

Query: 468  I-STSATPKIFSFGVSTNSNQSNGSLTTVPLFSVNAAPEAPTFGSSTSLIFHXXXXXXXX 644
            + S+S++P +F+FG ST   QSNGSLTT     V +A  A  F  ++             
Sbjct: 803  VLSSSSSPVLFAFGASTTPTQSNGSLTTASSMPVISAAPAMKFSDNSVTSVFSTSIVTST 862

Query: 645  XXXXXXXXTAVPVFSASSAFKFGAG 719
                    +A PV S   +F+FG+G
Sbjct: 863  SSGSPTISSATPVSSTVPSFQFGSG 887


>ref|XP_010908640.1| PREDICTED: nuclear pore complex protein NUP1-like [Elaeis guineensis]
          Length = 1274

 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 1/206 (0%)
 Frame = +3

Query: 102  IVPSIDAGFASTISSAADTVKPTPPMPPQLSSLFNKSTPKEQPVITMFGSKSTKKGPAFT 281
            ++     GF   ++ A       PP P   S L ++   +++     F S  +K  P FT
Sbjct: 660  VISEKSTGFTFPVAPAPSIHSQPPPKPAMPSPLVDRPASQKEQTAAPF-SFGSKDEPTFT 718

Query: 282  FSSTSNNINGASGTKSIDSNCEIMKSXXXXXXXXXXXXGSGKNEKNL-KSRDPKKSSENA 458
            FSST +   G S T  +        S            G  +   +L KS   + SS   
Sbjct: 719  FSSTVST-TGFSETDGLKIGVSNDSSSIVDNNSKLNLCGEMQQAGDLIKSVGTEVSSV-- 775

Query: 459  ITGISTSATPKIFSFGVSTNSNQSNGSLTTVPLFSVNAAPEAPTFGSSTSLIFHXXXXXX 638
               ISTS TP++F+FG ST  + SNGSL +   FS + +P A TF + T+          
Sbjct: 776  ---ISTSTTPRVFAFGASTAPSLSNGSLRSSSNFSFSTSP-AVTFSAGTASSIFSTSPSS 831

Query: 639  XXXXXXXXXXTAVPVFSASSAFKFGA 716
                       A P+FS     +FG+
Sbjct: 832  ATGCNGLSVSPAAPIFSMVPVLQFGS 857


>ref|XP_008810621.1| PREDICTED: uncharacterized protein DDB_G0274915-like [Phoenix
            dactylifera]
          Length = 1273

 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
 Frame = +3

Query: 102  IVPSIDAGFASTISSAADTVKPTPPMPPQLSSLFNKSTPKEQPVITMFGSKSTKKGPAFT 281
            +V     GFA  ++ A  T    PP P   S L ++S+ +++     F S  +K     T
Sbjct: 662  VVSEKSTGFAFPVAPAPSTHSQPPPKPAMPSLLLHRSSYQKEQTDAPF-SFGSKDESTIT 720

Query: 282  FSS--TSNNINGASGTKSIDSNCEIMKSXXXXXXXXXXXXGSGKNEKNLKSRDPKKSSEN 455
            FSS  ++   +  +G K   SN                   SG+ ++     D  KS+  
Sbjct: 721  FSSIVSTTGFSETAGMKISVSN-----DSSAIVDDNSKLNRSGEMQQG---GDLIKSAGT 772

Query: 456  AIT-GISTSATPKIFSFGVSTNSNQSNGSLTTVPLFSVNAAPEAPTFGSSTSLIFHXXXX 632
            A++ GISTS TP +F+FG ST  + SNGSL +    S + +P A TF   T         
Sbjct: 773  AVSSGISTSRTPAMFAFGASTAPSLSNGSLHSSSNSSFSTSP-AVTFSDITVSSVFSTSH 831

Query: 633  XXXXXXXXXXXXTAVPVFSASSAFKFGA 716
                         AVP FSA    +FG+
Sbjct: 832  SSAISSSGLSISPAVPTFSAVHTLQFGS 859


Top