BLASTX nr result
ID: Cinnamomum25_contig00026205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00026205
(387 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_862785.1| RNA polymerase alpha subunit [Calycanthus flori... 247 2e-63
ref|YP_740234.1| RNA polymerase alpha subunit [Liriodendron tuli... 242 6e-62
ref|YP_009048319.1| DNA-directed RNA polymerase alpha chain (chl... 241 1e-61
ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [... 241 1e-61
gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magno... 241 1e-61
ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|34... 241 1e-61
ref|YP_004769746.1| RNA polymerase alpha subunit [Magnolia kwang... 240 2e-61
ref|YP_009123284.1| RNA polymerase alpha subunit (chloroplast) [... 240 3e-61
ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [... 239 7e-61
ref|YP_001294130.1| RNA polymerase alpha subunit [Chloranthus sp... 238 1e-60
gb|AEX94393.1| RNA polymerase alpha subunit (chloroplast) [Kniph... 236 6e-60
gb|AEX94394.1| RNA polymerase alpha subunit (chloroplast) [Dorya... 234 2e-59
gb|AKF00531.1| RNA polymerase alpha subunit (chloroplast) [Royst... 233 3e-59
ref|YP_009144806.1| RNA polymerase alpha subunit (chloroplast) [... 233 5e-59
gb|AIR76454.1| RNA polymerase alpha subunit (chloroplast) [Dendr... 233 5e-59
ref|YP_009026469.1| RNA polymerase alpha subunit (chloroplast) [... 233 5e-59
gb|AKF01798.1| RNA polymerase alpha subunit (chloroplast) [Iriar... 232 8e-59
gb|AKF01560.1| RNA polymerase alpha subunit (chloroplast) [Geono... 232 8e-59
gb|AKF01103.1| RNA polymerase alpha subunit (chloroplast) [Bactr... 232 8e-59
gb|AKF00606.1| RNA polymerase alpha subunit (chloroplast) [Reinh... 232 8e-59
>ref|NP_862785.1| RNA polymerase alpha subunit [Calycanthus floridus var. glaucus]
gi|41688654|sp|Q7YJU6.1|RPOA_CALFG RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Calycanthus floridus var. glaucus]
gi|32399410|emb|CAD28752.1| RNA polymerase alpha subunit
[Calycanthus floridus var. glaucus]
Length = 340
Score = 247 bits (631), Expect = 2e-63
Identities = 120/129 (93%), Positives = 126/129 (97%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVL+SNLYGTRDASICVRGPKYVTAQDIISPPSVE+VDTTQHIA+LTEPI+LCIE +
Sbjct: 91 LKEIVLKSNLYGTRDASICVRGPKYVTAQDIISPPSVEIVDTTQHIASLTEPINLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYGS NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKAPNNYQDGSYPIDAVSMPVRNANHSIHSYGSGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_740234.1| RNA polymerase alpha subunit [Liriodendron tulipifera]
gi|122239940|sp|Q0G9I7.1|RPOA_LIRTU RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Liriodendron tulipifera]
gi|113201026|gb|ABI32541.1| RNA polymerase alpha subunit
[Liriodendron tulipifera]
Length = 337
Score = 242 bits (618), Expect = 6e-62
Identities = 117/129 (90%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRS+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNRNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_009048319.1| DNA-directed RNA polymerase alpha chain (chloroplast) [Magnolia
yunnanensis] gi|573015534|gb|AHF72112.1| DNA-directed
RNA polymerase alpha chain (chloroplast) [Magnolia
yunnanensis]
Length = 337
Score = 241 bits (616), Expect = 1e-61
Identities = 117/129 (90%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRS+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
gi|452848803|ref|YP_007474484.1| RNA polymerase alpha
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|619275767|ref|YP_009026913.1| RNA polymerase
alpha subunit (plastid) [Magnolia tripetala]
gi|372862453|gb|AEX98534.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis]
gi|372862536|gb|AEX98616.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862621|gb|AEX98700.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862706|gb|AEX98784.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|608608435|gb|AHW51989.1| RNA polymerase alpha subunit
[Magnolia tripetala]
Length = 337
Score = 241 bits (616), Expect = 1e-61
Identities = 117/129 (90%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRS+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magnolia liliiflora]
Length = 337
Score = 241 bits (616), Expect = 1e-61
Identities = 117/129 (90%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRS+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|343887570|gb|AEM65249.1|
RpoA [Magnolia denudata] gi|372862283|gb|AEX98366.1| RNA
polymerase alpha subunit (chloroplast) [Magnolia
denudata]
Length = 337
Score = 241 bits (616), Expect = 1e-61
Identities = 117/129 (90%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRS+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_004769746.1| RNA polymerase alpha subunit [Magnolia kwangsiensis]
gi|302424212|gb|ADL39088.1| RNA polymerase alpha subunit
[Magnolia kwangsiensis]
Length = 337
Score = 240 bits (613), Expect = 2e-61
Identities = 116/129 (89%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRS+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IDRDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_009123284.1| RNA polymerase alpha subunit (chloroplast) [Chloranthus japonicus]
gi|756761888|gb|AJM70003.1| RNA polymerase alpha subunit
(chloroplast) [Chloranthus japonicus]
Length = 334
Score = 240 bits (612), Expect = 3e-61
Identities = 116/129 (89%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYGTR+ASICVRGP+YVTAQDIISPPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGTRNASICVRGPRYVTAQDIISPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMK+PN YQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IQRDRGYRMKTPNKYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [Magnolia grandiflora]
gi|372862875|gb|AEX98951.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia grandiflora]
gi|372863045|gb|AEX99119.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia grandiflora]
Length = 337
Score = 239 bits (609), Expect = 7e-61
Identities = 116/129 (89%), Positives = 123/129 (95%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVL S+LYGTRDASICVRGP+YVTAQDII PPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLGSHLYGTRDASICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMK+PNNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>ref|YP_001294130.1| RNA polymerase alpha subunit [Chloranthus spicatus]
gi|172048690|sp|A6MMF4.1|RPOA_CHLSC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Chloranthus spicatus]
gi|146744219|gb|ABQ43291.1| RNA polymerase alpha subunit
[Chloranthus spicatus]
Length = 334
Score = 238 bits (607), Expect = 1e-60
Identities = 115/129 (89%), Positives = 124/129 (96%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYGTR+ASICVRGP+YVTAQDIISPPSVE+VDTTQHIA+LTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGTRNASICVRGPRYVTAQDIISPPSVEIVDTTQHIASLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMK+PN YQ+GSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IQRDRGYRMKTPNKYQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALHEAS 219
>gb|AEX94393.1| RNA polymerase alpha subunit (chloroplast) [Kniphofia linearifolia]
Length = 339
Score = 236 bits (601), Expect = 6e-60
Identities = 115/129 (89%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYG RDASICVRGP+YVTAQDIISPPSVE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGVRDASICVRGPRYVTAQDIISPPSVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYR NNYQDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRTNPTNNYQDGSYPIDAVSMPVRNANHSIHSYGNRNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AEX94394.1| RNA polymerase alpha subunit (chloroplast) [Doryanthes palmeri]
Length = 336
Score = 234 bits (596), Expect = 2e-59
Identities = 115/129 (89%), Positives = 121/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYG RDASICVRGP+YVTAQDIISPPSVE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGVRDASICVRGPRYVTAQDIISPPSVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+R+RGYRMK NN QDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRNRGYRMKPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AKF00531.1| RNA polymerase alpha subunit (chloroplast) [Roystonea regia]
Length = 341
Score = 233 bits (595), Expect = 3e-59
Identities = 115/129 (89%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEI+LRSNLYG DASICVRGP+YVTAQDIISPP VE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
IERDRGYRMKS NN QDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IERDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>ref|YP_009144806.1| RNA polymerase alpha subunit (chloroplast) [Elleanthus sodiroi]
gi|827346207|gb|AKJ77413.1| RNA polymerase alpha subunit
(chloroplast) [Elleanthus sodiroi]
Length = 339
Score = 233 bits (593), Expect = 5e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYG RDASICVRGPKY+TAQDIISPPSVE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGVRDASICVRGPKYITAQDIISPPSVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS N+ DGSYPID VSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AIR76454.1| RNA polymerase alpha subunit (chloroplast) [Dendrobium catenatum]
Length = 339
Score = 233 bits (593), Expect = 5e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYG RDASICVRGPKY+TAQDIISPPSVE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGVRDASICVRGPKYITAQDIISPPSVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS N+ DGSYPID VSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>ref|YP_009026469.1| RNA polymerase alpha subunit (chloroplast) [Dendrobium catenatum]
gi|507474351|gb|AGM48227.1| RNA polymerase alpha subunit
(chloroplast) [Dendrobium catenatum]
Length = 339
Score = 233 bits (593), Expect = 5e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEIVLRSNLYG RDASICVRGPKY+TAQDIISPPSVE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIVLRSNLYGVRDASICVRGPKYITAQDIISPPSVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS N+ DGSYPID VSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AKF01798.1| RNA polymerase alpha subunit (chloroplast) [Iriartea deltoidea]
Length = 341
Score = 232 bits (591), Expect = 8e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEI+LRSNLYG DASICVRGP+YVTAQDIISPP VE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS NN QDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AKF01560.1| RNA polymerase alpha subunit (chloroplast) [Geonoma undata subsp.
dussiana]
Length = 341
Score = 232 bits (591), Expect = 8e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEI+LRSNLYG DASICVRGP+YVTAQDIISPP VE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS NN QDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AKF01103.1| RNA polymerase alpha subunit (chloroplast) [Bactris major]
Length = 341
Score = 232 bits (591), Expect = 8e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEI+LRSNLYG DASICVRGP+YVTAQDIISPP VE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS NN QDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219
>gb|AKF00606.1| RNA polymerase alpha subunit (chloroplast) [Reinhardtia
paiewonskiana]
Length = 341
Score = 232 bits (591), Expect = 8e-59
Identities = 114/129 (88%), Positives = 120/129 (93%)
Frame = +1
Query: 1 LKEIVLRSNLYGTRDASICVRGPKYVTAQDIISPPSVELVDTTQHIANLTEPIHLCIEFK 180
LKEI+LRSNLYG DASICVRGP+YVTAQDIISPP VE+VDTTQHIANLTEPI LCIE +
Sbjct: 91 LKEIILRSNLYGVIDASICVRGPRYVTAQDIISPPYVEIVDTTQHIANLTEPIDLCIELQ 150
Query: 181 IERDRGYRMKSPNNYQDGSYPIDAVSMPVRNANHSIHSYGSENEKQEILFLEIWTNGSLT 360
I+RDRGYRMKS NN QDGSYPIDAVSMPVRNANHSIHSYG+ NEKQEILFLEIWTNGSLT
Sbjct: 151 IKRDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 210
Query: 361 PKEALREAS 387
PKEAL EAS
Sbjct: 211 PKEALYEAS 219