BLASTX nr result
ID: Cinnamomum25_contig00026187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00026187
(252 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III s... 72 1e-10
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s... 72 1e-10
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera] 72 1e-10
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s... 70 5e-10
gb|KHN21749.1| DNA-directed RNA polymerase III subunit RPC3 [Gly... 67 6e-09
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s... 67 6e-09
ref|XP_010108344.1| DNA-directed RNA polymerase III subunit RPC3... 65 2e-08
ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989... 65 2e-08
ref|XP_008793122.1| PREDICTED: uncharacterized protein LOC103709... 65 2e-08
ref|XP_008793120.1| PREDICTED: uncharacterized protein LOC103709... 65 2e-08
ref|XP_008793119.1| PREDICTED: uncharacterized protein LOC103709... 65 2e-08
ref|XP_012484104.1| PREDICTED: DNA-directed RNA polymerase III s... 64 3e-08
gb|KJB34121.1| hypothetical protein B456_006G048800 [Gossypium r... 64 3e-08
gb|KJB34120.1| hypothetical protein B456_006G048800 [Gossypium r... 64 3e-08
ref|XP_012484103.1| PREDICTED: DNA-directed RNA polymerase III s... 64 3e-08
gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gos... 64 3e-08
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas... 64 3e-08
ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III s... 64 4e-08
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s... 62 1e-07
ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III s... 62 2e-07
>ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
[Vitis vinifera]
Length = 429
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/78 (52%), Positives = 46/78 (58%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EATR VPLSMDTI + V G MTLE VR +L QLGC P + G
Sbjct: 296 EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAES 355
Query: 55 YSIDLKNIITNAQNEEVE 2
YS+DLKNII AQN+EVE
Sbjct: 356 YSVDLKNIIELAQNDEVE 373
>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
protein product [Vitis vinifera]
Length = 524
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/78 (52%), Positives = 46/78 (58%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EATR VPLSMDTI + V G MTLE VR +L QLGC P + G
Sbjct: 296 EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAES 355
Query: 55 YSIDLKNIITNAQNEEVE 2
YS+DLKNII AQN+EVE
Sbjct: 356 YSVDLKNIIELAQNDEVE 373
>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
Length = 721
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/78 (52%), Positives = 46/78 (58%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EATR VPLSMDTI + V G MTLE VR +L QLGC P + G
Sbjct: 390 EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAES 449
Query: 55 YSIDLKNIITNAQNEEVE 2
YS+DLKNII AQN+EVE
Sbjct: 450 YSVDLKNIIELAQNDEVE 467
>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
nucifera]
Length = 531
Score = 70.1 bits (170), Expect = 5e-10
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EATR VPLSMD IL EV G MT+E VRAAL QLGC S G E
Sbjct: 303 EATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAALGQLGCRSSPRGAEDS 362
Query: 55 YSIDLKNIITNAQNEEVE 2
+S+DL+NII AQN+E+E
Sbjct: 363 HSVDLRNIIEIAQNDEME 380
>gb|KHN21749.1| DNA-directed RNA polymerase III subunit RPC3 [Glycine soja]
Length = 527
Score = 66.6 bits (161), Expect = 6e-09
Identities = 40/78 (51%), Positives = 48/78 (61%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EATR VPLS+DTI+ EV G MT++ +RA+L QLGC PS+ E
Sbjct: 297 EATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCSPSMI-LEES 355
Query: 55 YSIDLKNIITNAQNEEVE 2
YSIDLK II A+NEEVE
Sbjct: 356 YSIDLKKIIEPARNEEVE 373
>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
[Glycine max]
Length = 518
Score = 66.6 bits (161), Expect = 6e-09
Identities = 40/78 (51%), Positives = 48/78 (61%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EATR VPLS+DTI+ EV G MT++ +RA+L QLGC PS+ E
Sbjct: 288 EATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCSPSMI-LEES 346
Query: 55 YSIDLKNIITNAQNEEVE 2
YSIDLK II A+NEEVE
Sbjct: 347 YSIDLKKIIEPARNEEVE 364
>ref|XP_010108344.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
gi|587932063|gb|EXC19135.1| DNA-directed RNA polymerase
III subunit RPC3 [Morus notabilis]
Length = 564
Score = 64.7 bits (156), Expect = 2e-08
Identities = 40/78 (51%), Positives = 47/78 (60%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
+ATR V LSMDTI +EV G +TL+ VRA+L QLGC S +GT+
Sbjct: 294 DATRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGC--SSSGTDDT 351
Query: 55 YSIDLKNIITNAQNEEVE 2
YSIDLK II AQ EEVE
Sbjct: 352 YSIDLKQIIELAQKEEVE 369
>ref|XP_009406215.1| PREDICTED: uncharacterized protein LOC103989158 [Musa acuminata
subsp. malaccensis]
Length = 516
Score = 64.7 bits (156), Expect = 2e-08
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -3
Query: 181 SMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEEVE 2
SMD IL+ VRG+P G+ MTLEH+R L QLGC S+ Y ++++ II + QN+EVE
Sbjct: 313 SMDGILEAVRGKPGGISMTLEHIRIVLDQLGCSSSIEDNNVFYKMEVQCIIESCQNDEVE 372
>ref|XP_008793122.1| PREDICTED: uncharacterized protein LOC103709507 isoform X3 [Phoenix
dactylifera]
Length = 416
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 181 SMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEEVE 2
+MD+IL+ VR +P G+ MTLEH+R L QL C G YSIDLK+II QN+EVE
Sbjct: 317 TMDSILEGVRAKPGGISMTLEHIRVILDQLHCQSCNWGAGASYSIDLKSIIDTCQNDEVE 376
>ref|XP_008793120.1| PREDICTED: uncharacterized protein LOC103709507 isoform X2 [Phoenix
dactylifera]
Length = 437
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 181 SMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEEVE 2
+MD+IL+ VR +P G+ MTLEH+R L QL C G YSIDLK+II QN+EVE
Sbjct: 317 TMDSILEGVRAKPGGISMTLEHIRVILDQLHCQSCNWGAGASYSIDLKSIIDTCQNDEVE 376
>ref|XP_008793119.1| PREDICTED: uncharacterized protein LOC103709507 isoform X1 [Phoenix
dactylifera]
Length = 518
Score = 64.7 bits (156), Expect = 2e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 181 SMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEEVE 2
+MD+IL+ VR +P G+ MTLEH+R L QL C G YSIDLK+II QN+EVE
Sbjct: 317 TMDSILEGVRAKPGGISMTLEHIRVILDQLHCQSCNWGAGASYSIDLKSIIDTCQNDEVE 376
>ref|XP_012484104.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
[Gossypium raimondii]
Length = 417
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -3
Query: 250 FGSYSEATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLA 71
FG+ EATR VPLS+ +I +EV EG +T + VRA+L QL C P +
Sbjct: 293 FGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVK 352
Query: 70 GTEGLYSIDLKNIITNAQNEEVE 2
T YS+D K II AQ+EEVE
Sbjct: 353 ATNESYSVDFKKIIELAQHEEVE 375
>gb|KJB34121.1| hypothetical protein B456_006G048800 [Gossypium raimondii]
Length = 408
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -3
Query: 250 FGSYSEATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLA 71
FG+ EATR VPLS+ +I +EV EG +T + VRA+L QL C P +
Sbjct: 293 FGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVK 352
Query: 70 GTEGLYSIDLKNIITNAQNEEVE 2
T YS+D K II AQ+EEVE
Sbjct: 353 ATNESYSVDFKKIIELAQHEEVE 375
>gb|KJB34120.1| hypothetical protein B456_006G048800 [Gossypium raimondii]
Length = 415
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -3
Query: 250 FGSYSEATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLA 71
FG+ EATR VPLS+ +I +EV EG +T + VRA+L QL C P +
Sbjct: 293 FGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVK 352
Query: 70 GTEGLYSIDLKNIITNAQNEEVE 2
T YS+D K II AQ+EEVE
Sbjct: 353 ATNESYSVDFKKIIELAQHEEVE 375
>ref|XP_012484103.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Gossypium raimondii] gi|763766904|gb|KJB34119.1|
hypothetical protein B456_006G048800 [Gossypium
raimondii]
Length = 517
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -3
Query: 250 FGSYSEATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLA 71
FG+ EATR VPLS+ +I +EV EG +T + VRA+L QL C P +
Sbjct: 293 FGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVK 352
Query: 70 GTEGLYSIDLKNIITNAQNEEVE 2
T YS+D K II AQ+EEVE
Sbjct: 353 ATNESYSVDFKKIIELAQHEEVE 375
>gb|KHG02841.1| DNA-directed RNA polymerase III subunit RPC3 [Gossypium arboreum]
Length = 513
Score = 64.3 bits (155), Expect = 3e-08
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = -3
Query: 250 FGSYSEATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLA 71
FG+ EATR VPLS+ +I +EV EG +T + VRA+L QL C P +
Sbjct: 289 FGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVK 348
Query: 70 GTEGLYSIDLKNIITNAQNEEVE 2
YS+D K II AQNEEVE
Sbjct: 349 AANESYSVDFKKIIELAQNEEVE 371
>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
gi|561016615|gb|ESW15419.1| hypothetical protein
PHAVU_007G071300g [Phaseolus vulgaris]
Length = 517
Score = 64.3 bits (155), Expect = 3e-08
Identities = 38/78 (48%), Positives = 46/78 (58%)
Frame = -3
Query: 235 EATRXXXXXXXXXXXVPLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGL 56
EAT+ VPLS+DTI EV G MT++ +RA+LSQLGC + +
Sbjct: 288 EATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRMI-VDDA 346
Query: 55 YSIDLKNIITNAQNEEVE 2
YSIDLK II AQNEEVE
Sbjct: 347 YSIDLKKIIERAQNEEVE 364
>ref|XP_010924543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis
guineensis]
Length = 518
Score = 63.9 bits (154), Expect = 4e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 181 SMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEEVE 2
+MD+IL+ VR +P G+ MTLEH+R L QL C G YSIDLK+II QN+EVE
Sbjct: 317 TMDSILEGVRAKPGGISMTLEHIRVILDQLRCQSCNWGGGASYSIDLKSIIDTCQNDEVE 376
>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
[Glycine max]
Length = 518
Score = 62.4 bits (150), Expect = 1e-07
Identities = 34/62 (54%), Positives = 42/62 (67%)
Frame = -3
Query: 187 PLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEE 8
PLS+DTI+ EV G MT++ +RA+L QLGC PS+ E Y IDLK II A+NEE
Sbjct: 304 PLSLDTIITEVMKTDTGRTMTIDRIRASLVQLGCSPSMI-LEESYCIDLKKIIEPARNEE 362
Query: 7 VE 2
VE
Sbjct: 363 VE 364
>ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus
grandis]
Length = 522
Score = 61.6 bits (148), Expect = 2e-07
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = -3
Query: 187 PLSMDTILQEVRGRPEGLEMTLEHVRAALSQLGCVPSLAGTEGLYSIDLKNIITNAQNEE 8
PLS++TI +EV G MTL+H+RA+L LGC G + Y IDLKNII AQNEE
Sbjct: 313 PLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCE---KGVDESYKIDLKNIIEQAQNEE 369
Query: 7 VE 2
VE
Sbjct: 370 VE 371