BLASTX nr result

ID: Cinnamomum25_contig00026042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00026042
         (412 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010274328.1| PREDICTED: threonine--tRNA ligase, mitochond...    63   9e-08
ref|XP_010274327.1| PREDICTED: threonine--tRNA ligase, mitochond...    63   9e-08
ref|XP_008802022.1| PREDICTED: threonine--tRNA ligase, mitochond...    62   2e-07
ref|XP_010913364.1| PREDICTED: threonine--tRNA ligase, mitochond...    61   3e-07
ref|XP_010272819.1| PREDICTED: threonine--tRNA ligase, mitochond...    59   2e-06

>ref|XP_010274328.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like isoform X2
           [Nelumbo nucifera]
          Length = 582

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 37/68 (54%), Positives = 44/68 (64%)
 Frame = -1

Query: 208 LIQLRNQASMGGEIKPNNSKPKFIKDEPYLDSIIEKRVRLFESIKAHQNEALQRISGETI 29
           LI      +MG   KP  SKP   KDE YL S+I+KR+RLFE+IKA Q E  QRI GE I
Sbjct: 37  LISSSATLAMGETPKPE-SKPSHPKDEAYLHSVIQKRIRLFEAIKAQQIEERQRIGGEPI 95

Query: 28  RVLILPDG 5
           ++  LPDG
Sbjct: 96  KI-TLPDG 102


>ref|XP_010274327.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like isoform X1
           [Nelumbo nucifera]
          Length = 729

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 37/68 (54%), Positives = 44/68 (64%)
 Frame = -1

Query: 208 LIQLRNQASMGGEIKPNNSKPKFIKDEPYLDSIIEKRVRLFESIKAHQNEALQRISGETI 29
           LI      +MG   KP  SKP   KDE YL S+I+KR+RLFE+IKA Q E  QRI GE I
Sbjct: 37  LISSSATLAMGETPKPE-SKPSHPKDEAYLHSVIQKRIRLFEAIKAQQIEERQRIGGEPI 95

Query: 28  RVLILPDG 5
           ++  LPDG
Sbjct: 96  KI-TLPDG 102


>ref|XP_008802022.1| PREDICTED: threonine--tRNA ligase, mitochondrial [Phoenix
           dactylifera]
          Length = 727

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -1

Query: 184 SMGGEIKPNNSKPKFIKDEPYLDSIIEKRVRLFESIKAHQNEALQRISGETIRVLILPDG 5
           S  GE+K   +KPK  KD+ YL++IIEKR+R+FESI+A Q    Q+ISGE I++  LPDG
Sbjct: 43  SRAGEVK-GKAKPKASKDDAYLEAIIEKRIRMFESIQAQQLAERQKISGEPIKI-TLPDG 100


>ref|XP_010913364.1| PREDICTED: threonine--tRNA ligase, mitochondrial [Elaeis
           guineensis]
          Length = 727

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = -1

Query: 262 PFLIHRPFT---KTLTLIPETLIQLRNQASMGGEIKPNNSKPKFIKDEPYLDSIIEKRVR 92
           PFL   P     + L+++   L       S  GE K   +KPK  KDE YL++IIEKRVR
Sbjct: 14  PFLAPPPLATPPRFLSIVLSPLSVSAMGESRAGEAK-GKAKPKASKDEAYLEAIIEKRVR 72

Query: 91  LFESIKAHQNEALQRISGETIRVLILPDG 5
           LFE+I+A Q    Q++ GE I++  LPDG
Sbjct: 73  LFEAIQAQQLTERQKVGGEPIKI-TLPDG 100


>ref|XP_010272819.1| PREDICTED: threonine--tRNA ligase, mitochondrial-like [Nelumbo
           nucifera]
          Length = 726

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = -1

Query: 151 KPKFIKDEPYLDSIIEKRVRLFESIKAHQNEALQRISGETIRVLILPDG 5
           +P   KDE YL+S+I+KR+RLFE+IKA Q E  QRI GE I++  LPDG
Sbjct: 52  QPSHAKDEAYLESVIQKRIRLFEAIKAKQIEERQRIGGEPIKI-TLPDG 99


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