BLASTX nr result
ID: Cinnamomum25_contig00025860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00025860
(343 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 70 5e-14
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group] 70 8e-14
ref|XP_010534024.1| PREDICTED: uncharacterized protein LOC104809... 74 1e-13
gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group] 69 1e-13
emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group] 69 1e-13
gb|ABA93730.1| retrotransposon protein, putative, unclassified [... 66 2e-13
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group... 65 4e-13
gb|ABG22578.1| retrotransposon protein, putative, unclassified [... 65 4e-13
gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group] 70 5e-13
emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group] 67 5e-13
emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indi... 67 5e-13
emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group] 65 5e-13
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M... 62 6e-13
ref|XP_006606754.1| PREDICTED: uncharacterized mitochondrial pro... 63 7e-13
ref|XP_009335215.1| PREDICTED: uncharacterized protein LOC103927... 63 8e-13
emb|CAN79672.1| hypothetical protein VITISV_012210 [Vitis vinifera] 66 8e-13
emb|CAN63507.1| hypothetical protein VITISV_029435 [Vitis vinifera] 65 8e-13
emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera] 65 1e-12
gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Jap... 66 1e-12
gb|AAP54332.2| retrotransposon protein, putative, unclassified [... 66 1e-12
>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 936
Score = 69.7 bits (169), Expect(2) = 5e-14
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG +PA TP+E HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 671 SQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPVNKER-YQRLVGRLIYLCHTRP 729
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ +VS+Y+H P + H++ V
Sbjct: 730 -DITYAVSVVSRYMHDPRSGHMDVV 753
Score = 34.3 bits (77), Expect(2) = 5e-14
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KGI++ +GHL++ GY DADW
Sbjct: 766 KGIWFKKNGHLDVEGYCDADW 786
>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
Length = 1262
Score = 70.1 bits (170), Expect(2) = 8e-14
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KYAL+LL T LG +PA TPV+ HKL E G+ + + Y +LVG+ IYL TRP
Sbjct: 997 SQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPVNKER-YQRLVGRLIYLCHTRP 1055
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ MVS+Y+H P + H++ V
Sbjct: 1056 -DITYAVSMVSRYMHDPRSGHMDAV 1079
Score = 33.1 bits (74), Expect(2) = 8e-14
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHL + GY DADW
Sbjct: 1092 KGLWFKKNGHLEVEGYCDADW 1112
>ref|XP_010534024.1| PREDICTED: uncharacterized protein LOC104809678 [Tarenaya
hassleriana]
Length = 2364
Score = 74.3 bits (181), Expect(2) = 1e-13
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL S LGAKPA TP+E+ +K + +G+ LE Y ++VGK IYLTITRP
Sbjct: 1908 SQRKYTLDLLGSAGKLGAKPAKTPIEVSYK-YQREGEPLEDSERYRKIVGKLIYLTITRP 1966
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
+S VSQ++HAP T H E V
Sbjct: 1967 -DLSFAVGQVSQFMHAPTTRHWEMV 1990
Score = 28.5 bits (62), Expect(2) = 1e-13
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KGI+ + ++IVGY DADW
Sbjct: 2003 KGIWMSRNKQVDIVGYCDADW 2023
>gb|AAO20078.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1299
Score = 69.3 bits (168), Expect(2) = 1e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG P TP++ HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 1034 SQRKYVLDLLSETGMLGCCPVSTPIDQNHKLCAESGDPVNRER-YQRLVGRLIYLCHTRP 1092
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ MVS+Y+H P +SH+E V
Sbjct: 1093 -DITYAVSMVSRYMHDPRSSHMEAV 1116
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHL I GY DADW
Sbjct: 1129 KGLWFKKNGHLKIEGYCDADW 1149
>emb|CAH66946.1| B0809H07.1 [Oryza sativa Indica Group]
Length = 1120
Score = 69.3 bits (168), Expect(2) = 1e-13
Identities = 39/85 (45%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG P TP++ HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 855 SQRKYVLDLLSETGMLGCCPVSTPIDQNHKLCAESGDPVNRER-YQRLVGRLIYLCHTRP 913
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ MVS+Y+H P +SH+E V
Sbjct: 914 -DITYAVSMVSRYMHDPRSSHMEAV 937
Score = 33.5 bits (75), Expect(2) = 1e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHL I GY DADW
Sbjct: 950 KGLWFKKNGHLKIEGYCDADW 970
>gb|ABA93730.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 656
Score = 66.2 bits (160), Expect(2) = 2e-13
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG + + TP++ H+L + GD + + Y +LVG+ IYL TRP
Sbjct: 391 SQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVNKEA-YQRLVGRLIYLCHTRP 449
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
IS V +VS+Y+H P T HL+ V
Sbjct: 450 -DISYVVSVVSRYMHDPRTGHLDVV 473
Score = 35.4 bits (80), Expect(2) = 2e-13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHLN+ GY DADW
Sbjct: 486 KGLWFRKNGHLNVEGYCDADW 506
>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711651|gb|ABF99446.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1393
Score = 65.5 bits (158), Expect(2) = 4e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG + + TP++ H+L + GD ++ + Y +LVG+ IYL TRP
Sbjct: 1128 SQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVDKEA-YQRLVGRLIYLCHTRP 1186
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
IS +VS+Y+H P T HL+ V
Sbjct: 1187 -DISYAVSVVSRYMHDPRTGHLDVV 1210
Score = 35.4 bits (80), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHLN+ GY DADW
Sbjct: 1223 KGLWFRKNGHLNVEGYCDADW 1243
>gb|ABG22578.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 836
Score = 65.5 bits (158), Expect(2) = 4e-13
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T +G P TP++ H+L + GD ++ + Y +LVG+ IYL TRP
Sbjct: 582 SQRKYILDLLTDTGMIGCCPCITPIDRNHQLCAQSGDPVD-EEAYQRLVGRLIYLCHTRP 640
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
IS +VS Y+H P TSHL+ V
Sbjct: 641 -DISYAVSVVSSYMHDPRTSHLDVV 664
Score = 35.4 bits (80), Expect(2) = 4e-13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHLN+ GY DADW
Sbjct: 677 KGLWFRKNGHLNVEGYCDADW 697
>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
Length = 1472
Score = 70.1 bits (170), Expect(2) = 5e-13
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KYAL+LL T LG +PA TPV+ HKL E G+ + + Y +LVG+ IYL TRP
Sbjct: 1207 SQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPVNKER-YQRLVGRLIYLCHTRP 1265
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ MVS+Y+H P + H++ V
Sbjct: 1266 -DITYAVSMVSRYMHDPRSGHMDAV 1289
Score = 30.4 bits (67), Expect(2) = 5e-13
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHL + GY DA W
Sbjct: 1302 KGLWFKKNGHLEVEGYCDAHW 1322
>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
Length = 1015
Score = 67.4 bits (163), Expect(2) = 5e-13
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG +PA TP+E HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 732 SQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVNKER-YQRLVGRLIYLCHTRP 790
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ +VS+Y+H P + H++ V
Sbjct: 791 -DITYAVSVVSRYMHDPRSGHMDAV 814
Score = 33.1 bits (74), Expect(2) = 5e-13
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHL + GY DADW
Sbjct: 827 KGLWFKKNGHLGVEGYCDADW 847
>emb|CAH67874.1| OSIGBa0153E02-OSIGBa0093I20.3 [Oryza sativa Indica Group]
Length = 806
Score = 67.4 bits (163), Expect(2) = 5e-13
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG +PA TP+E HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 541 SQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVNKER-YQRLVGRLIYLCHTRP 599
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ +VS+Y+H P + H++ V
Sbjct: 600 -DITYAVSVVSRYMHDPRSGHMDAV 623
Score = 33.1 bits (74), Expect(2) = 5e-13
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHL + GY DADW
Sbjct: 636 KGLWFKKNGHLGVEGYCDADW 656
>emb|CAE03643.1| OSJNBa0060N03.8 [Oryza sativa Japonica Group]
Length = 343
Score = 65.5 bits (158), Expect(2) = 5e-13
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG + + TP++ H+L + GD ++ + Y +LVG+ IYL TRP
Sbjct: 78 SQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVDKEA-YQRLVGRLIYLCHTRP 136
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
IS +VS+Y+H P T HL+ V
Sbjct: 137 -DISYAVSVVSRYMHDPRTGHLDVV 160
Score = 35.0 bits (79), Expect(2) = 5e-13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+++ +GHLN+ GY DADW
Sbjct: 173 KGLWFMKNGHLNVEGYCDADW 193
>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus domestica]
Length = 1390
Score = 62.4 bits (150), Expect(2) = 6e-13
Identities = 35/86 (40%), Positives = 48/86 (55%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL+ T LG KP DTP+ H L L+ Y +LVG+ IYL TRP
Sbjct: 1124 SQRKYVLDLLKETGMLGCKPVDTPIVEKHHLCLDPNQESIDKGRYQRLVGRLIYLAHTRP 1183
Query: 182 *YISQVACMVSQYVHAPPTSHLETVI 259
I+ +VSQ++H+P H+ V+
Sbjct: 1184 -DIAYAVSVVSQFMHSPSVDHMAAVM 1208
Score = 37.7 bits (86), Expect(2) = 6e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+ Y HGHLN+ G+ DADW
Sbjct: 1220 KGVLYQKHGHLNVEGFIDADW 1240
>ref|XP_006606754.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 164
Score = 62.8 bits (151), Expect(2) = 7e-13
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KYAL+LL T LG KP DTP+E HK F Y +LVGK IYL+ TRP
Sbjct: 25 SQRKYALDLLVETGMLGCKPIDTPIEQNHKNFYCADATSADRGRYQRLVGKLIYLSRTRP 84
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ ++SQ++H P H++ V
Sbjct: 85 -NIAYAVNVMSQFMHDPKKPHMDVV 108
Score = 37.4 bits (85), Expect(2) = 7e-13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+ + +HGHL + GY+DADW
Sbjct: 121 KGLLFSNHGHLKVEGYTDADW 141
>ref|XP_009335215.1| PREDICTED: uncharacterized protein LOC103927954 [Pyrus x
bretschneideri]
Length = 1700
Score = 62.8 bits (151), Expect(2) = 8e-13
Identities = 35/86 (40%), Positives = 48/86 (55%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL+ T LG KP DTP+ H L L+ Y +LVG+ IYL TRP
Sbjct: 1022 SQRKYVLDLLKETGMLGCKPVDTPIVEKHHLCLDPNQKSVDKGRYQRLVGRLIYLAHTRP 1081
Query: 182 *YISQVACMVSQYVHAPPTSHLETVI 259
I+ +VSQ++H+P H+ V+
Sbjct: 1082 -DIAYAVSVVSQFMHSPSEDHMAAVM 1106
Score = 37.0 bits (84), Expect(2) = 8e-13
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KG+ Y HGHL I G++DADW
Sbjct: 1118 KGVLYRKHGHLRIEGFTDADW 1138
>emb|CAN79672.1| hypothetical protein VITISV_012210 [Vitis vinifera]
Length = 1211
Score = 65.9 bits (159), Expect(2) = 8e-13
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KYAL++L+ T L KP DTP++ KL L G+ L Y +LVGK YLTITRP
Sbjct: 945 SQRKYALDILKETGMLDCKPIDTPMDPNVKLVLGQGEPLGDPRRYRRLVGKLNYLTITRP 1004
Query: 182 *YISQVACMVSQYVHAPPTSHLETVI 259
IS +VSQ++ +P SH + VI
Sbjct: 1005 -DISFPVSVVSQFLQSPCDSHWDVVI 1029
Score = 33.9 bits (76), Expect(2) = 8e-13
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
+G+ Y + GH +VGY+DADW
Sbjct: 1041 QGVLYENKGHTQVVGYTDADW 1061
>emb|CAN63507.1| hypothetical protein VITISV_029435 [Vitis vinifera]
Length = 1211
Score = 65.5 bits (158), Expect(2) = 8e-13
Identities = 40/86 (46%), Positives = 51/86 (59%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KYAL++L T LG KP DTP++ KL G+ L Y +LVGK YLTITRP
Sbjct: 945 SQRKYALDILEKTGMLGCKPIDTPMDPNVKLVPRQGEPLGDPGRYRRLVGKLNYLTITRP 1004
Query: 182 *YISQVACMVSQYVHAPPTSHLETVI 259
IS +VSQ++ +P SH + VI
Sbjct: 1005 -DISFPVSVVSQFLQSPCDSHWDAVI 1029
Score = 34.3 bits (77), Expect(2) = 8e-13
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
+G+ Y + GH +VGY+DADW
Sbjct: 1041 QGVLYENRGHTQVVGYTDADW 1061
>emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
Length = 1354
Score = 65.1 bits (157), Expect(2) = 1e-12
Identities = 40/86 (46%), Positives = 51/86 (59%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KYAL++L T L KP DTP++ KL L G+ L Y +LVGK YLTITRP
Sbjct: 1068 SQRKYALDILEETGMLDCKPVDTPMDPNVKLVLGQGEPLGDPGRYRRLVGKLNYLTITRP 1127
Query: 182 *YISQVACMVSQYVHAPPTSHLETVI 259
IS +VSQ++ +P SH + VI
Sbjct: 1128 -DISFPVSVVSQFLQSPCDSHWDAVI 1152
Score = 34.3 bits (77), Expect(2) = 1e-12
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
+G+ Y + GH +VGY+DADW
Sbjct: 1164 QGVLYENRGHTQVVGYTDADW 1184
>gb|AAM91874.1| putative copia-like polyprotein [Oryza sativa Japonica Group]
Length = 894
Score = 65.9 bits (159), Expect(2) = 1e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG +PA T +E HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 629 SQRKYVLDLLSDTGMLGCRPASTLIEQNHKLCAESGDPVNKER-YQRLVGRLIYLCHTRP 687
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ +VS+Y+H P + H++ V
Sbjct: 688 -DITYAVSVVSRYMHDPRSGHMDVV 711
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KGI++ +GHL++ GY DADW
Sbjct: 724 KGIWFKKNGHLDMEGYCDADW 744
>gb|AAP54332.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 822
Score = 65.9 bits (159), Expect(2) = 1e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SVSKYALNLLRSTSYLGAKPADTPVEMGHKLFLEDGDLLEYDTLYCQLVGKSIYLTITRP 181
S KY L+LL T LG +PA T +E HKL E GD + + Y +LVG+ IYL TRP
Sbjct: 557 SQRKYVLDLLSDTGMLGCRPASTLIEQNHKLCAESGDPVNKER-YQRLVGRLIYLCHTRP 615
Query: 182 *YISQVACMVSQYVHAPPTSHLETV 256
I+ +VS+Y+H P + H++ V
Sbjct: 616 -DITYAVSVVSRYMHDPRSGHMDVV 639
Score = 33.5 bits (75), Expect(2) = 1e-12
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 276 KGIFYGSHGHLNIVGYSDADW 338
KGI++ +GHL++ GY DADW
Sbjct: 652 KGIWFKKNGHLDMEGYCDADW 672