BLASTX nr result

ID: Cinnamomum25_contig00024919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00024919
         (298 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007031313.1| Uncharacterized protein TCM_016763 [Theobrom...    62   2e-07
ref|XP_007017130.1| Uncharacterized protein TCM_042329 [Theobrom...    61   3e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   1e-06
ref|XP_007026458.1| Uncharacterized protein TCM_021522 [Theobrom...    59   2e-06
ref|XP_007031312.1| Uncharacterized protein TCM_016762 [Theobrom...    58   2e-06
ref|XP_007046402.1| Uncharacterized protein TCM_011921 [Theobrom...    57   5e-06
ref|XP_007046404.1| Uncharacterized protein TCM_011923 [Theobrom...    57   6e-06
ref|XP_010037898.1| PREDICTED: uncharacterized protein LOC104426...    56   8e-06
ref|XP_008358230.1| PREDICTED: putative ribonuclease H protein A...    56   8e-06

>ref|XP_007031313.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
            gi|508710342|gb|EOY02239.1| Uncharacterized protein
            TCM_016763 [Theobroma cacao]
          Length = 2127

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/85 (32%), Positives = 46/85 (54%)
 Frame = -3

Query: 287  IKLGWQASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSSWIFG 108
            +KL W+  TGNSLW+ + +++Y        +   +H S +W+++ +      Q   W  G
Sbjct: 1627 LKLWWRFQTGNSLWTQFLRTKYCLGRIPHHIQPKLHDSHVWKRMISGREMALQNIRWKIG 1686

Query: 107  NGQDINLWHDPWIGDLPLSTRFPYY 33
             G D+  WHD W+GD PL+  FP +
Sbjct: 1687 KG-DLFFWHDCWMGDKPLAASFPEF 1710


>ref|XP_007017130.1| Uncharacterized protein TCM_042329 [Theobroma cacao]
            gi|508787493|gb|EOY34749.1| Uncharacterized protein
            TCM_042329 [Theobroma cacao]
          Length = 2606

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/86 (34%), Positives = 46/86 (53%)
 Frame = -3

Query: 287  IKLGWQASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSSWIFG 108
            +KL W+  T NSLW+ + K++Y        +   +H S +W+++        Q   W  G
Sbjct: 1391 LKLWWRFQTCNSLWTRFLKTKYCLGRIPHFVQPKLHDSQVWKRMIFGRDVALQNIRWGIG 1450

Query: 107  NGQDINLWHDPWIGDLPLSTRFPYYH 30
             G+ +  WHD W+GDLPLS  FP +H
Sbjct: 1451 KGE-LFFWHDCWMGDLPLSNLFPSFH 1475


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
 Frame = -3

Query: 296  ASFIKLGWQASTGNSLWSFWFKSRYFKH-LPIWSLANTIHGSCIWRKIRNLASHIWQGSS 120
            A+ +KL W   + NS W+   K R+F    PI         S +W  ++N  S + Q   
Sbjct: 801  AAMLKLAWNLLSSNSQWAVLLKRRFFSQGQPIRYFVK----SSVWHGVKNHMSILRQNKL 856

Query: 119  WIFGNGQDINLWHDPWIGDLPLSTRF---PYYH 30
            WI G G  INLW + W+G+ PL T F   P++H
Sbjct: 857  WIVGTGDRINLWTNNWLGE-PLVTLFNIDPFFH 888


>ref|XP_007026458.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
            gi|508715063|gb|EOY06960.1| Uncharacterized protein
            TCM_021522 [Theobroma cacao]
          Length = 3503

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 46/86 (53%)
 Frame = -3

Query: 287  IKLGWQASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSSWIFG 108
            +KL W+  T NSLW+ + +++Y        +   +H S +W+++        Q   W  G
Sbjct: 1207 LKLWWRFQTCNSLWTRFLRTKYCLGRIPHLVQPKLHDSQVWKRMIVGRDVALQNIRWRIG 1266

Query: 107  NGQDINLWHDPWIGDLPLSTRFPYYH 30
             G+ +  WHD W+GD PL+T FP +H
Sbjct: 1267 KGE-LFFWHDCWMGDQPLATLFPSFH 1291


>ref|XP_007031312.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
            gi|508710341|gb|EOY02238.1| Uncharacterized protein
            TCM_016762 [Theobroma cacao]
          Length = 2214

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 44/85 (51%)
 Frame = -3

Query: 287  IKLGWQASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSSWIFG 108
            +KL W+  T +SLW+ + K++Y        +   IH S IW++I        Q + W  G
Sbjct: 1714 LKLWWRFYTCDSLWTLFLKTKYCLGRIPHYVQPKIHSSSIWKRITGGRDVTIQNTRWKIG 1773

Query: 107  NGQDINLWHDPWIGDLPLSTRFPYY 33
             G+ +  WHD W+GD PL   FP +
Sbjct: 1774 RGE-LFFWHDCWMGDQPLVISFPSF 1797


>ref|XP_007046402.1| Uncharacterized protein TCM_011921 [Theobroma cacao]
           gi|508710337|gb|EOY02234.1| Uncharacterized protein
           TCM_011921 [Theobroma cacao]
          Length = 926

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/85 (32%), Positives = 44/85 (51%)
 Frame = -3

Query: 287 IKLGWQASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSSWIFG 108
           +KL W+  T +SLW+ + K++Y        +   +H S IW++I        Q + W  G
Sbjct: 426 LKLWWRFYTCDSLWTHFLKTKYCLGRIPHYVQPKLHNSSIWKRITGGRDVTIQNTRWKIG 485

Query: 107 NGQDINLWHDPWIGDLPLSTRFPYY 33
            G+ +  WHD W+GD PL   FP +
Sbjct: 486 RGE-LFFWHDCWMGDQPLVISFPSF 509


>ref|XP_007046404.1| Uncharacterized protein TCM_011923 [Theobroma cacao]
            gi|508710339|gb|EOY02236.1| Uncharacterized protein
            TCM_011923 [Theobroma cacao]
          Length = 1954

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/90 (33%), Positives = 46/90 (51%)
 Frame = -3

Query: 287  IKLGWQASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSSWIFG 108
            +KL W+ ST   LW+ + K++Y        +   +H S +W+++        Q + W  G
Sbjct: 1453 LKLWWRFSTCEGLWTKFLKTKYCMGQIPHYVHPKLHDSQVWKRMVRGREVAIQNTRWRIG 1512

Query: 107  NGQDINLWHDPWIGDLPLSTRFPYYHFPHD 18
             G  +  WHD W+GD PL T FP  HF +D
Sbjct: 1513 KGS-LFFWHDCWMGDQPLVTSFP--HFRND 1539


>ref|XP_010037898.1| PREDICTED: uncharacterized protein LOC104426519 isoform X1
           [Eucalyptus grandis]
          Length = 1102

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = -3

Query: 296 ASFIKLGWQASTGN-SLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSS 120
           AS +K  W   T   SLW  W  S + K +  W        S  W+K   L  +  Q   
Sbjct: 334 ASLLKYIWFLFTDKESLWCRWIHSNFLKRVNFWISPQPTLCSWAWKKFLQLRPYFRQSFH 393

Query: 119 WIFGNGQDINLWHDPWIGDLPLST 48
           W  GNG   +LWHD W+   PL T
Sbjct: 394 WKIGNGMQTSLWHDNWLPCGPLDT 417


>ref|XP_008358230.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 398

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = -3

Query: 296 ASFIKLGWQ-ASTGNSLWSFWFKSRYFKHLPIWSLANTIHGSCIWRKIRNLASHIWQGSS 120
           A   K  W+  S  NSLW+   K+ YF    IW  +     SC W  I      +  GS 
Sbjct: 6   ALLAKQCWRLVSDPNSLWARVIKAHYFPRSSIWEASKGGRASCAWSSILTGRDLLKLGSH 65

Query: 119 WIFGNGQDINLWHDPWIGDLPLSTRFPYYHFP 24
           W    GQD+ +W D W+  LP+    P    P
Sbjct: 66  WQILGGQDVRVWVDKWLPSLPMGHPLPLGSVP 97


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