BLASTX nr result
ID: Cinnamomum25_contig00024427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00024427
(331 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot... 90 4e-24
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom... 90 4e-24
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 98 6e-23
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo... 86 2e-22
gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposo... 76 5e-19
gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposo... 76 5e-19
ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobrom... 72 1e-18
ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 69 4e-17
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 78 1e-16
gb|KHN04079.1| Retrovirus-related Pol polyprotein from transposo... 66 1e-15
gb|KHN02060.1| Retrovirus-related Pol polyprotein from transposo... 66 1e-15
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 73 2e-15
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 79 2e-15
gb|KHN19723.1| Retrovirus-related Pol polyprotein from transposo... 65 3e-15
gb|KHN11334.1| Retrovirus-related Pol polyprotein from transposo... 65 3e-15
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905... 66 3e-15
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 76 3e-15
gb|KHN26032.1| Retrovirus-related Pol polyprotein from transposo... 65 4e-15
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 77 4e-15
dbj|BAQ19356.1| putative gag-pol polyprotein [Torenia fournieri] 68 4e-15
>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1029
Score = 90.1 bits (222), Expect(2) = 4e-24
Identities = 44/76 (57%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVA-RG 53
++LLC LPPSYENFVDTM+YG++TL+ EDV ++LN KELKKKV +++ EGLV RG
Sbjct: 270 LILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFKELKKKVGGIRNENQAEGLVVNRG 329
Query: 52 RTEKKEQNRRGRSRSK 5
R ++K +R+G+SR+K
Sbjct: 330 RGKEKGLDRKGKSRAK 345
Score = 47.8 bits (112), Expect(2) = 4e-24
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = -3
Query: 326 KGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
+GTS++TH+D F + ILDL+NIDV I+DED A
Sbjct: 238 EGTSVNTHIDEFNRVILDLKNIDVKIEDEDLA 269
>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
gi|508717229|gb|EOY09126.1| Uncharacterized protein
TCM_024518 [Theobroma cacao]
Length = 277
Score = 90.1 bits (222), Expect(2) = 4e-24
Identities = 44/76 (57%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVA-RG 53
++LLC LPPSYENFVDTM+YG++TL+ EDV + LNSKELKKKV +++ EGLV RG
Sbjct: 148 LILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSKELKKKVGGIRNENQAEGLVVNRG 207
Query: 52 RTEKKEQNRRGRSRSK 5
R ++K +++G+SR+K
Sbjct: 208 RGKEKGLDKKGKSRAK 223
Score = 47.8 bits (112), Expect(2) = 4e-24
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = -3
Query: 326 KGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
+GTS++TH+D F + ILDL+NIDV I+DED A
Sbjct: 116 EGTSVNTHIDEFNRVILDLKNIDVKIEDEDLA 147
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 98.2 bits (243), Expect(2) = 6e-23
Identities = 51/76 (67%), Positives = 56/76 (73%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
I L+CSLP SYE+FVD MMYG+ TL +DV ALNS+ELKK V SGEGLVARGR
Sbjct: 100 IFLMCSLPNSYEHFVDIMMYGRGTLFIKDVRVALNSRELKKMVFKSRKYDSGEGLVARGR 159
Query: 49 TEKKEQNRRGRSRSKS 2
T KK RRGRSRSKS
Sbjct: 160 TRKKNNGRRGRSRSKS 175
Score = 35.8 bits (81), Expect(2) = 6e-23
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
++ SI H + F K I DL NIDV ++ EDQA
Sbjct: 67 KESMSIKDHFNEFNKTIXDLRNIDVKVNYEDQA 99
>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 85.9 bits (211), Expect(2) = 2e-22
Identities = 42/77 (54%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSG--EGLVAR 56
+MLLCSLP S+EN VDTM++G++TL+ E+V++ LNS+ELKKK+ TEN G E L+AR
Sbjct: 145 VMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSRELKKKI-TENKGEGGDPEALMAR 203
Query: 55 GRTEKKEQNRRGRSRSK 5
GR EK++ + + RSK
Sbjct: 204 GRLEKRDSKSKNKRRSK 220
Score = 46.2 bits (108), Expect(2) = 2e-22
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
++G+SI H+ FTKA+LDL+++DV ID+EDQA
Sbjct: 112 EEGSSIKEHVSLFTKAVLDLKSVDVRIDEEDQA 144
>gb|KHN13199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 344
Score = 76.3 bits (186), Expect(2) = 5e-19
Identities = 38/79 (48%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVA-TENSDSSGEGLVARG 53
++LL SLP +Y+NFVDT+++G+ +LS E+V++AL S ELK+++ + SSGEGL+ RG
Sbjct: 146 VLLLSSLPRAYDNFVDTIIFGRSSLSMEEVKTALQSWELKRRITDSYGGTSSGEGLMVRG 205
Query: 52 RTEKKE--QNRRGRSRSKS 2
R ++++ Q RR +SRSK+
Sbjct: 206 RMDERKSFQRRRSKSRSKN 224
Score = 44.7 bits (104), Expect(2) = 5e-19
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 326 KGTSISTHLDSFTKAILDLENIDVHIDDEDQANNVALLST 207
+G SI H+D+F + +L L+NIDV +DDEDQA V LLS+
Sbjct: 114 EGESIHKHIDNFNQVVLSLKNIDVAVDDEDQA--VLLLSS 151
>gb|KHN13198.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 341
Score = 76.3 bits (186), Expect(2) = 5e-19
Identities = 38/79 (48%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVA-TENSDSSGEGLVARG 53
++LL SLP +Y+NFVDT+++G+ +LS E+V++AL S ELK+++ + SSGEGL+ RG
Sbjct: 143 VLLLSSLPRAYDNFVDTIIFGRSSLSMEEVKTALQSWELKRRITDSYGGTSSGEGLMVRG 202
Query: 52 RTEKKE--QNRRGRSRSKS 2
R ++++ Q RR +SRSK+
Sbjct: 203 RMDERKSFQRRRSKSRSKN 221
Score = 44.7 bits (104), Expect(2) = 5e-19
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -3
Query: 326 KGTSISTHLDSFTKAILDLENIDVHIDDEDQANNVALLST 207
+G SI H+D+F + +L L+NIDV +DDEDQA V LLS+
Sbjct: 111 EGESIHKHIDNFNQVVLSLKNIDVAVDDEDQA--VLLLSS 148
>ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
gi|508786946|gb|EOY34202.1| Uncharacterized protein
TCM_041944 [Theobroma cacao]
Length = 698
Score = 71.6 bits (174), Expect(2) = 1e-18
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSD 83
++LLCSLPPSYENF+DTM+YG++T + EDV ++LNSKELKKKV D
Sbjct: 148 LILLCSLPPSYENFMDTMLYGRDTFTFEDVRASLNSKELKKKVGHFRQD 196
Score = 47.8 bits (112), Expect(2) = 1e-18
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = -3
Query: 326 KGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
+GTS++TH+D F + ILDL+NIDV I+DED A
Sbjct: 116 EGTSVNTHIDEFNRVILDLKNIDVKIEDEDLA 147
>ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104588258 [Nelumbo nucifera]
Length = 2014
Score = 69.3 bits (168), Expect(2) = 4e-17
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATEN-SDSSGEGLVARG 53
I LLCSLP SY++F +T++YG+E + EDV++AL EL T N S+S+ EGL+ G
Sbjct: 597 ITLLCSLPASYKHFRETLLYGREEIIVEDVKNALLQHELIDNQLTNNPSNSTAEGLIVCG 656
Query: 52 RTEKKEQNRRGRSRSKS 2
R K+ + + R RSKS
Sbjct: 657 RPSKRSDSNKSRGRSKS 673
Score = 45.1 bits (105), Expect(2) = 4e-17
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
++G SI THLD F ++DL+NIDV IDDED A
Sbjct: 564 REGNSIKTHLDEFFSIVMDLQNIDVVIDDEDLA 596
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 77.8 bits (190), Expect(2) = 1e-16
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGL-VARG 53
++LLCSLP SYENFVDTMMYG++++S DV+ AL SKEL+K V+ S GL V+RG
Sbjct: 146 MILLCSLPSSYENFVDTMMYGRBSISXNDVKDALQSKELQKLVSGSEEGSVETGLTVSRG 205
Query: 52 RTEKKEQNRRGRSRSKS 2
R+ ++ R +S SKS
Sbjct: 206 RSMERNGGGRSKSXSKS 222
Score = 34.7 bits (78), Expect(2) = 1e-16
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -3
Query: 326 KGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
+G + HL++F + ILDL + V +++EDQA
Sbjct: 114 EGMQVRDHLNNFNRIILDLNGVGVKVEEEDQA 145
>gb|KHN04079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 154
Score = 65.9 bits (159), Expect(2) = 1e-15
Identities = 29/60 (48%), Positives = 49/60 (81%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
++LLCSLP SY +F +T+++G++++S ++V++ALNSKEL ++ + S +SGEGL ARG+
Sbjct: 96 LLLLCSLPKSYSHFKETLLFGRDSVSLDEVQAALNSKELNER-KEKKSSTSGEGLTARGK 154
Score = 43.5 bits (101), Expect(2) = 1e-15
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3
Query: 317 SISTHLDSFTKAILDLENIDVHIDDEDQA 231
S+ LD F K ILDLENIDV IDDEDQA
Sbjct: 67 SVGEQLDLFNKLILDLENIDVTIDDEDQA 95
>gb|KHN02060.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 154
Score = 65.9 bits (159), Expect(2) = 1e-15
Identities = 29/60 (48%), Positives = 49/60 (81%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
++LLCSLP SY +F +T+++G++++S ++V++ALNSKEL ++ + S +SGEGL ARG+
Sbjct: 96 LLLLCSLPKSYSHFKETLLFGRDSVSLDEVQAALNSKELNER-KEKKSSTSGEGLTARGK 154
Score = 43.5 bits (101), Expect(2) = 1e-15
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3
Query: 317 SISTHLDSFTKAILDLENIDVHIDDEDQA 231
S+ LD F K ILDLENIDV IDDEDQA
Sbjct: 67 SVGEQLDLFNKLILDLENIDVTIDDEDQA 95
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 72.8 bits (177), Expect(2) = 2e-15
Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -1
Query: 235 KLIMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVAR 56
K LL SLP SYE FVDTM+YG+ TL+ EDV+++L+SKE++K E S+GEGL+AR
Sbjct: 147 KAFFLLSSLPKSYEGFVDTMLYGRTTLTLEDVKASLSSKEIQKNCELET--SNGEGLMAR 204
Query: 55 GRTEKKEQNR-RGRSRSKS 2
+K ++N+ +G+ K+
Sbjct: 205 TEKKKDQKNKNQGKGHGKN 223
Score = 35.8 bits (81), Expect(2) = 2e-15
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENID-VHIDDEDQA 231
++G +I H+D+F K ILDLE ++ V I DED+A
Sbjct: 115 REGVTIQDHIDTFNKIILDLEGVENVKICDEDKA 148
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 78.6 bits (192), Expect(2) = 2e-15
Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKE-LKKKVATENSDSSGEGLVARG 53
++LLCSLP SY NF DT++Y ++TL+ ++V AL++KE +KK V +E S+S EGLV RG
Sbjct: 54 LILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRG 113
Query: 52 RTEKKEQNRRGRSRSKS 2
R ++K N + R +S S
Sbjct: 114 RQQEKNTNNKSRDKSSS 130
Score = 30.0 bits (66), Expect(2) = 2e-15
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDED 237
Q S+ HL +F + + DLE+++V D+ED
Sbjct: 21 QDDGSVMDHLSAFKEIVADLESMEVKYDEED 51
>gb|KHN19723.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 154
Score = 64.7 bits (156), Expect(2) = 3e-15
Identities = 29/60 (48%), Positives = 48/60 (80%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
++LLCSLP SY +F +T+++G++ +S ++V++ALNSKEL ++ + S +SGEGL ARG+
Sbjct: 96 LLLLCSLPKSYSHFKETLLFGRDYVSLDEVQAALNSKELNER-KEKKSSTSGEGLTARGK 154
Score = 43.5 bits (101), Expect(2) = 3e-15
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3
Query: 317 SISTHLDSFTKAILDLENIDVHIDDEDQA 231
S+ LD F K ILDLENIDV IDDEDQA
Sbjct: 67 SVGEQLDLFNKLILDLENIDVTIDDEDQA 95
>gb|KHN11334.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 154
Score = 64.7 bits (156), Expect(2) = 3e-15
Identities = 29/60 (48%), Positives = 48/60 (80%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
++LLCSLP SY +F +T+++G++ +S ++V++ALNSKEL ++ + S +SGEGL ARG+
Sbjct: 96 LLLLCSLPKSYSHFKETLLFGRDFVSLDEVQAALNSKELNER-KEKKSSTSGEGLTARGK 154
Score = 43.5 bits (101), Expect(2) = 3e-15
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3
Query: 317 SISTHLDSFTKAILDLENIDVHIDDEDQA 231
S+ LD F K ILDLENIDV IDDEDQA
Sbjct: 67 SVGEQLDLFNKLILDLENIDVTIDDEDQA 95
>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
subsp. vulgaris]
Length = 2676
Score = 66.2 bits (160), Expect(2) = 3e-15
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
I LLCSLP SY++F +T++YG++ LS +DV ALN +EL T S +S +GL RGR
Sbjct: 143 IWLLCSLPHSYKHFRETILYGRDDLSIDDVRDALNQRELIDNQLTSKSSNSSDGLFVRGR 202
Query: 49 TEKKEQ--------NRRGRSRSK 5
+ RGRS+SK
Sbjct: 203 SNDVASTYQGGNGGKNRGRSKSK 225
Score = 41.6 bits (96), Expect(2) = 3e-15
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDEDQA 231
++G S+ +H+D F ++DL+NIDV +DDED A
Sbjct: 110 EEGNSLKSHIDEFYSIVMDLQNIDVILDDEDLA 142
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 76.3 bits (186), Expect(2) = 3e-15
Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKE-LKKKVATENSDSSGEGLVARG 53
++LLCSLP SY NF DT++Y +TL+ ++V AL++KE +KK V +E S+S EGLV RG
Sbjct: 145 LILLCSLPSSYANFRDTILYSCDTLTLKEVYDALHAKEKIKKMVPSEGSNSQAEGLVVRG 204
Query: 52 RTEKKEQNRRGRSRSKS 2
R ++K N + R +S S
Sbjct: 205 RQQEKNTNSKSRDKSSS 221
Score = 31.6 bits (70), Expect(2) = 3e-15
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDED 237
Q S+ HL +F K + DLE+++V D+ED
Sbjct: 112 QDDGSVMDHLSAFKKIVADLESMEVKYDEED 142
>gb|KHN26032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 154
Score = 64.7 bits (156), Expect(2) = 4e-15
Identities = 29/60 (48%), Positives = 48/60 (80%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
++LLCSLP SY +F +T+++G++ +S ++V++ALNSKEL ++ + S +SGEGL ARG+
Sbjct: 96 LLLLCSLPKSYSHFKETLLFGRDYVSLDEVQAALNSKELNER-KEKKSSTSGEGLTARGK 154
Score = 43.1 bits (100), Expect(2) = 4e-15
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -3
Query: 317 SISTHLDSFTKAILDLENIDVHIDDEDQA 231
S+ LD F K ILDLENIDV IDDEDQA
Sbjct: 67 SVREQLDLFNKLILDLENIDVTIDDEDQA 95
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 77.4 bits (189), Expect(2) = 4e-15
Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKE-LKKKVATENSDSSGEGLVARG 53
++LLCSLP SY NF DT++Y ++TL+ ++V AL++KE +KK V +E S+S EGLV RG
Sbjct: 87 LILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHTKEKMKKMVPSEGSNSQAEGLVVRG 146
Query: 52 RTEKKEQNRRGRSRSKS 2
R +KK + R +S S
Sbjct: 147 RQQKKNTKNQSRDKSSS 163
Score = 30.0 bits (66), Expect(2) = 4e-15
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 329 QKGTSISTHLDSFTKAILDLENIDVHIDDED 237
Q S+ HL +F + + DLE+++V D+ED
Sbjct: 54 QDDGSVMDHLSAFKEIVADLESMEVKYDEED 84
>dbj|BAQ19356.1| putative gag-pol polyprotein [Torenia fournieri]
Length = 605
Score = 67.8 bits (164), Expect(2) = 4e-15
Identities = 28/75 (37%), Positives = 54/75 (72%)
Frame = -1
Query: 229 IMLLCSLPPSYENFVDTMMYGKETLSKEDVESALNSKELKKKVATENSDSSGEGLVARGR 50
++L+C+LP SY F DT++YG+ETL+ ++V++AL SK+L ++ + S+ E L +G+
Sbjct: 164 LLLVCALPRSYNTFKDTLLYGRETLTLKEVQAALKSKQLNTRIDNKAVGSTSEALYVKGK 223
Query: 49 TEKKEQNRRGRSRSK 5
E+K+ ++ +++SK
Sbjct: 224 GEEKKTHKERKNKSK 238
Score = 39.7 bits (91), Expect(2) = 4e-15
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -3
Query: 317 SISTHLDSFTKAILDLENIDVHIDDEDQA 231
+I +D F K ILDLENI+V I+DEDQA
Sbjct: 135 AIDEQMDQFIKLILDLENIEVKIEDEDQA 163