BLASTX nr result

ID: Cinnamomum25_contig00024365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00024365
         (339 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]          77   4e-12
gb|AFK47692.1| unknown [Medicago truncatula]                           77   6e-12
ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro...    75   2e-11
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic...    74   3e-11
ref|NP_001238613.1| geranyl-diphosphate synthase [Glycine max] g...    68   3e-09
ref|XP_007142292.1| hypothetical protein PHAVU_008G268200g [Phas...    63   9e-08
gb|AKJ26303.1| chloroplast heterodimeric geranylgeranyl pyrophos...    59   1e-06
ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prun...    59   1e-06
gb|AFY98640.1| geranyl-diphosphate synthase [Phaseolus vulgaris]       57   4e-06
ref|XP_007142291.1| hypothetical protein PHAVU_008G268100g [Phas...    57   5e-06
ref|XP_011007747.1| PREDICTED: heterodimeric geranylgeranyl pyro...    56   8e-06

>gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
          Length = 301

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
 Frame = -1

Query: 183 STVHFSRISNHDRSLLAPP-KPTVVRTTQPH-PYWTSLHAEIEAHLKRAIPMKEPLVVFE 10
           STVHFS ISN  RS L    KPT VR +    PYW SLHA++EAHLK+ I +KEPL+VFE
Sbjct: 13  STVHFSCISNQHRSHLTTKLKPTTVRMSMTQTPYWASLHADVEAHLKQTITIKEPLLVFE 72

Query: 9   PMH 1
           PMH
Sbjct: 73  PMH 75


>gb|AFK47692.1| unknown [Medicago truncatula]
          Length = 297

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 43/75 (57%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -1

Query: 219 MVGAILRTNGIISTVHFSRISNHDRSLLAPP-KPTVVRTTQPH-PYWTSLHAEIEAHLKR 46
           MV        + STVHFS ISN  RS L    K T +RT+    PYW SLHA+IEAHLK+
Sbjct: 1   MVTTTSYVTNVKSTVHFSCISNQHRSHLNTKLKSTTLRTSMTQTPYWASLHADIEAHLKQ 60

Query: 45  AIPMKEPLVVFEPMH 1
            I +KEPLVVFEPMH
Sbjct: 61  TITIKEPLVVFEPMH 75


>ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Cicer arietinum]
          Length = 302

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 44/68 (64%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
 Frame = -1

Query: 183 STVHFSRIS--NHDRSLLAPPKPTVVR-----TTQPHPYWTSLHAEIEAHLKRAIPMKEP 25
           STVHFS IS  N  RS L P KPT VR     T   HPYW SL A+IEAHLK++I +KEP
Sbjct: 13  STVHFSCISKSNQYRSHL-PLKPTTVRMSMTQTHHTHPYWASLQADIEAHLKQSITIKEP 71

Query: 24  LVVFEPMH 1
           LVVFEPMH
Sbjct: 72  LVVFEPMH 79


>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
           gi|355518891|gb|AET00515.1| geranylgeranyl pyrophosphate
           synthase [Medicago truncatula]
          Length = 297

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 42/75 (56%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = -1

Query: 219 MVGAILRTNGIISTVHFSRISNHDRSLLAPP-KPTVVRTTQPH-PYWTSLHAEIEAHLKR 46
           MV        + STVHFS ISN  RS L    K T +R +    PYW SLHA+IEAHLK+
Sbjct: 1   MVTTTSYVTNVKSTVHFSCISNQHRSHLNTKLKSTTLRMSMTQTPYWASLHADIEAHLKQ 60

Query: 45  AIPMKEPLVVFEPMH 1
            I +KEPLVVFEPMH
Sbjct: 61  TITIKEPLVVFEPMH 75


>ref|NP_001238613.1| geranyl-diphosphate synthase [Glycine max]
           gi|166835923|gb|ABY90133.1| geranyl-diphosphate synthase
           [Glycine max]
          Length = 283

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -1

Query: 219 MVGAILRTNGIISTVHFSRISNHDRSLLAPPKPTVVRTTQPH-PYWTSLHAEIEAHLKRA 43
           M+GA+L        +HFS IS   R  L P KP  +R   PH P+W SL A+IEAHLK+ 
Sbjct: 1   MLGALLLNANF--KIHFSLISCQARVPL-PVKPAPLRMPSPHYPHWASLQADIEAHLKQT 57

Query: 42  IPMKEPLVVFEPM 4
           IP+KEPL VFEPM
Sbjct: 58  IPLKEPLEVFEPM 70


>ref|XP_007142292.1| hypothetical protein PHAVU_008G268200g [Phaseolus vulgaris]
           gi|561015425|gb|ESW14286.1| hypothetical protein
           PHAVU_008G268200g [Phaseolus vulgaris]
          Length = 274

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -1

Query: 132 PPKPTVVRTTQPHPYWTSLHAEIEAHLKRAIPMKEPLVVFEPMH 1
           P KPT +    P P+W SL A+IEA+LKR IP+KEPL V+EPMH
Sbjct: 26  PVKPTPLTIPTPQPHWASLQADIEAYLKRTIPLKEPLEVYEPMH 69


>gb|AKJ26303.1| chloroplast heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit [Paeonia lactiflora]
          Length = 298

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/73 (43%), Positives = 44/73 (60%)
 Frame = -1

Query: 219 MVGAILRTNGIISTVHFSRISNHDRSLLAPPKPTVVRTTQPHPYWTSLHAEIEAHLKRAI 40
           M GA+L  NG   ++     S   R L +  KP  V  +    YW ++ ++IEAHLK+AI
Sbjct: 1   MAGALLHINGTKPSLLTLSRSKPHRPLFSY-KPMRVSMSHNSSYWATIDSDIEAHLKQAI 59

Query: 39  PMKEPLVVFEPMH 1
           P++ PLVVFEPMH
Sbjct: 60  PVRPPLVVFEPMH 72


>ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica]
           gi|462410393|gb|EMJ15727.1| hypothetical protein
           PRUPE_ppa015010mg [Prunus persica]
          Length = 296

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -1

Query: 132 PPKPTVVRTTQPHPYWTSLHAEIEAHLKRAIPMKEPLVVFEPMH 1
           P + T+   +Q HPYW S+HAEIE HLK+ I ++ PL VFEPMH
Sbjct: 26  PSRTTMAIMSQDHPYWASVHAEIEVHLKQHILVRPPLSVFEPMH 69


>gb|AFY98640.1| geranyl-diphosphate synthase [Phaseolus vulgaris]
          Length = 273

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = -1

Query: 186 ISTVHFSRISNHDRSLLAPPKPTVVRTTQPHPYWTSLHAEIEAHLKRAIPMKEPLVVFEP 7
           ++T    R     RS L P +PT +    P  +W SL A+IEA+LK+ IP+KEPL V+EP
Sbjct: 9   VNTSFGLRFPRQARSAL-PVRPTPLTIPTPQLHWASLQADIEAYLKQTIPLKEPLEVYEP 67

Query: 6   MH 1
           MH
Sbjct: 68  MH 69


>ref|XP_007142291.1| hypothetical protein PHAVU_008G268100g [Phaseolus vulgaris]
           gi|561015424|gb|ESW14285.1| hypothetical protein
           PHAVU_008G268100g [Phaseolus vulgaris]
          Length = 274

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = -1

Query: 165 RISNHDRSLLAPPKPTVVRTTQPHPYWTSLHAEIEAHLKRAIPMKEPLVVFEPMH 1
           R     RS L P +PT +    P  +W SL A+IEA+LK+ IP+KEPL V+EPMH
Sbjct: 16  RFPRQARSAL-PVRPTPLTIPTPQLHWASLQADIEAYLKQTIPLKEPLEVYEPMH 69


>ref|XP_011007747.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Populus euphratica]
          Length = 312

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
 Frame = -1

Query: 159 SNHDRSLLAPPKPTVV------RTTQPHPYWTSLHAEIEAHLKRAIPMKEPLVVFEPMH 1
           SN +R LL+    TV        TT    YWTS++ EI+AHLK+AIP++ PL+VFEPMH
Sbjct: 23  SNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLLVFEPMH 81


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