BLASTX nr result
ID: Cinnamomum25_contig00024062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00024062
(415 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010273040.1| PREDICTED: pentatricopeptide repeat-containi... 99 3e-27
ref|XP_008235032.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-13
ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-12
ref|XP_007199044.1| hypothetical protein PRUPE_ppa018221mg, part... 63 1e-12
ref|XP_009618113.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-12
ref|XP_008235062.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-12
ref|XP_010449129.1| PREDICTED: pentatricopeptide repeat-containi... 62 5e-12
ref|XP_010449130.1| PREDICTED: pentatricopeptide repeat-containi... 62 5e-12
ref|XP_010319468.1| PREDICTED: pentatricopeptide repeat-containi... 57 7e-12
ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containi... 61 9e-12
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi... 57 9e-12
ref|XP_011464226.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 58 1e-11
gb|KHN02018.1| Pentatricopeptide repeat-containing protein [Glyc... 57 1e-11
ref|XP_004295634.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-11
ref|XP_012090548.1| PREDICTED: pentatricopeptide repeat-containi... 55 2e-11
ref|XP_009134331.1| PREDICTED: pentatricopeptide repeat-containi... 63 2e-11
ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containi... 55 3e-11
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 58 3e-11
ref|XP_008371807.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-11
ref|XP_002269101.2| PREDICTED: pentatricopeptide repeat-containi... 61 3e-11
>ref|XP_010273040.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Nelumbo nucifera]
Length = 594
Score = 98.6 bits (244), Expect(2) = 3e-27
Identities = 51/96 (53%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
Frame = -2
Query: 405 RLLASPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGL 226
RLL+SPALV+ +Y IF QI PNLFI NT+IKKLV++ D ++ PL VY+ ML+ +
Sbjct: 15 RLLSSPALVEPSYARLIFSQISSPNLFIWNTLIKKLVENGMDSMSPPPLLVYKQMLKTSV 74
Query: 225 RPNGHTYMYLIRALAARFS--IRQGEEIHTWVLKLG 124
RPN HT+MYLI+AL A+ + +GE IH+ V+K G
Sbjct: 75 RPNSHTFMYLIKALQAQLDLYLHEGEAIHSNVVKFG 110
Score = 50.1 bits (118), Expect(2) = 3e-27
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPEP 2
+ K G SQFVSSAL+GFYV G V+ ARRVFD++ EP
Sbjct: 106 VVKFGCDSSQFVSSALLGFYVACGFVDRARRVFDKISEP 144
>ref|XP_008235032.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Prunus mume]
Length = 475
Score = 65.5 bits (158), Expect(2) = 2e-13
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = -2
Query: 393 SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCH---PLTVYQHMLEIGLR 223
S L+D + H + Q+P P++FICN++I+ S H PL++Y HM + +
Sbjct: 55 SLGLLDLAHLHFL-TQLPKPHVFICNSLIRAFSHSHTPRNQIHNHIPLSIYIHMHKSSIL 113
Query: 222 PNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGY 121
PN T+ +L+++LA +QG+ +HT VLKLG+
Sbjct: 114 PNNFTFPFLLKSLADSHDFKQGQCLHTHVLKLGH 147
Score = 36.6 bits (83), Expect(2) = 2e-13
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ KLG Y +V ++L+ Y G +E R+VFDEMP+
Sbjct: 142 VLKLGHLYDIYVQNSLLNVYASCGRMEFCRQVFDEMPQ 179
>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 60.1 bits (144), Expect(2) = 1e-12
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -2
Query: 411 ICRLLA---SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHM 241
+ RLLA P + +F QI HP + ICNT+IK V G + + +Y M
Sbjct: 40 LSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMIKAFVLK---GKLINTIQIYSQM 96
Query: 240 LEIGLRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYGF 115
LE GL P+ +T Y+++A A S GE H +KLG+ F
Sbjct: 97 LENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGFWF 138
Score = 39.3 bits (90), Expect(2) = 1e-12
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -1
Query: 112 KLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
KLGF + FV + L+ Y G+V +AR +FDEMP
Sbjct: 133 KLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMP 167
>ref|XP_007199044.1| hypothetical protein PRUPE_ppa018221mg, partial [Prunus persica]
gi|462394444|gb|EMJ00243.1| hypothetical protein
PRUPE_ppa018221mg, partial [Prunus persica]
Length = 372
Score = 63.2 bits (152), Expect(2) = 1e-12
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = -2
Query: 363 HSIFL-QIPHPNLFICNTIIKKLVDSCNDGLTCH---PLTVYQHMLEIGLRPNGHTYMYL 196
H FL Q+P P++FICN++I+ S H PL++Y HM + + PN T+ +L
Sbjct: 1 HLHFLTQLPKPHVFICNSLIRAFSHSHTPHNQIHNHIPLSIYVHMHKSSILPNNFTFPFL 60
Query: 195 IRALAARFSIRQGEEIHTWVLKLGY 121
+++LA +QG+ +HT VLKLG+
Sbjct: 61 LKSLADSHDFKQGQCLHTHVLKLGH 85
Score = 36.2 bits (82), Expect(2) = 1e-12
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ KLG Y +V ++L+ Y G +E R+VFDEMP+
Sbjct: 80 VLKLGHLYDIYVHNSLLNVYASCGRMEFCRQVFDEMPQ 117
>ref|XP_009618113.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Nicotiana tomentosiformis]
gi|697128126|ref|XP_009618114.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g66520
[Nicotiana tomentosiformis]
Length = 627
Score = 66.6 bits (161), Expect(2) = 1e-12
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = -2
Query: 378 DFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGLRPNGHTYMY 199
D Y +F ++P+P+ FI NTII+ + S L L Y HMLE +RPN T+
Sbjct: 72 DLNYALQVFHKLPNPDTFIYNTIIRGYLQS---QLLKESLLFYSHMLERSVRPNNFTFPL 128
Query: 198 LIRALAARFSIRQGEEIHTWVLKLGYGF 115
+IRA ++ +G++IH V+K G+GF
Sbjct: 129 VIRACCIDNAVEEGKQIHGHVIKFGFGF 156
Score = 32.3 bits (72), Expect(2) = 1e-12
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ K GFG+ +F + L+ YV +E A VFD M E
Sbjct: 149 VIKFGFGFDKFSQNNLIHMYVNFHFLEEAMMVFDSMYE 186
>ref|XP_008235062.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like, partial [Prunus mume]
Length = 415
Score = 62.4 bits (150), Expect(2) = 1e-12
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = -2
Query: 348 QIPHPNLFICNTIIKKLVDSCNDGLTCH---PLTVYQHMLEIGLRPNGHTYMYLIRALAA 178
Q+P P++FICN++I+ S H PL++Y HM + + PN T+ +L+++LA
Sbjct: 13 QLPKPHVFICNSLIRAFSHSHTPRNQIHNHIPLSIYIHMHKSSILPNNFTFPFLLKSLAD 72
Query: 177 RFSIRQGEEIHTWVLKLGY 121
+QG+ +HT VLKLG+
Sbjct: 73 SHDFKQGQCLHTHVLKLGH 91
Score = 36.6 bits (83), Expect(2) = 1e-12
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ KLG Y +V ++L+ Y G +E R+VFDEMP+
Sbjct: 86 VLKLGHLYDIYVQNSLLNVYASCGRMEFCRQVFDEMPQ 123
>ref|XP_010449129.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like isoform X1 [Camelina sativa]
Length = 619
Score = 62.4 bits (150), Expect(2) = 5e-12
Identities = 31/97 (31%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = -2
Query: 402 LLASPALVDFTYTHSIFLQIPHP-NLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGL 226
L++ P+ +Y H +F +I P N+F+ NT+I+ + ++ + +++Y+ M GL
Sbjct: 81 LVSLPSPPPMSYAHKVFSKIEKPINIFVWNTLIRGYAECSSNYASVSAISLYREMKVSGL 140
Query: 225 -RPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYG 118
P+ HTY +L++A+A +R GE IH+ V++ G+G
Sbjct: 141 VEPDTHTYPFLLKAVAKTADVRLGETIHSVVIRSGFG 177
Score = 34.7 bits (78), Expect(2) = 5e-12
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ + GFG F ++L+ Y G + SA +VFDEMPE
Sbjct: 171 VIRSGFGSLIFAQNSLLHLYANCGDLSSAYKVFDEMPE 208
>ref|XP_010449130.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like isoform X2 [Camelina sativa]
Length = 599
Score = 62.4 bits (150), Expect(2) = 5e-12
Identities = 31/97 (31%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Frame = -2
Query: 402 LLASPALVDFTYTHSIFLQIPHP-NLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGL 226
L++ P+ +Y H +F +I P N+F+ NT+I+ + ++ + +++Y+ M GL
Sbjct: 61 LVSLPSPPPMSYAHKVFSKIEKPINIFVWNTLIRGYAECSSNYASVSAISLYREMKVSGL 120
Query: 225 -RPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYG 118
P+ HTY +L++A+A +R GE IH+ V++ G+G
Sbjct: 121 VEPDTHTYPFLLKAVAKTADVRLGETIHSVVIRSGFG 157
Score = 34.7 bits (78), Expect(2) = 5e-12
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ + GFG F ++L+ Y G + SA +VFDEMPE
Sbjct: 151 VIRSGFGSLIFAQNSLLHLYANCGDLSSAYKVFDEMPE 188
>ref|XP_010319468.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Solanum lycopersicum]
Length = 530
Score = 56.6 bits (135), Expect(2) = 7e-12
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = -2
Query: 411 ICRLLA---SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHM 241
+ RLLA P L Y IF QI P + I NT+IK + +D + +Y++M
Sbjct: 40 LSRLLAFCSHPNLGSPVYGFKIFEQIQEPTICIFNTMIKSFLLKGDDEVN-RITEIYRNM 98
Query: 240 LEIGLRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGY 121
L+IG+ P+ +T Y+++A S+ GE +H +LKLG+
Sbjct: 99 LKIGMYPDNYTLPYVLKACGRMKSLHLGELVHGQILKLGF 138
Score = 40.0 bits (92), Expect(2) = 7e-12
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
I KLGF FV ++L+GFY +VE+AR VF E+P
Sbjct: 133 ILKLGFLIDTFVGNSLIGFYTCFDNVEAARSVFYEIP 169
>ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 626
Score = 60.8 bits (146), Expect(2) = 9e-12
Identities = 34/99 (34%), Positives = 54/99 (54%)
Frame = -2
Query: 411 ICRLLASPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEI 232
+ + A L D +Y +F ++P P+ FI NT+I+ L+ S + L Y MLE
Sbjct: 60 VIKFCAISELGDLSYALQVFDKLPEPDPFIYNTVIRGLLKS---QMLRDSLLFYLCMLES 116
Query: 231 GLRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYGF 115
+RPN T+ LIR ++ +G++IH V+K G+GF
Sbjct: 117 SVRPNSFTFPPLIRVCCIDNAVEEGKQIHGHVVKFGFGF 155
Score = 35.4 bits (80), Expect(2) = 9e-12
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
+ K GFG+ +F + L+ YV +E A+RVFD M E
Sbjct: 148 VVKFGFGFDRFSQNNLIHMYVSFRCLEEAKRVFDNMCE 185
>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 57.0 bits (136), Expect(2) = 9e-12
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = -2
Query: 411 ICRLLA---SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHM 241
+ RLLA P TY +F +I HP L ICNTIIK + + N T H V+ M
Sbjct: 40 LSRLLAFCSHPYQGSLTYACRVFERIHHPTLCICNTIIKTFLVNGNFYGTFH---VFTKM 96
Query: 240 LEIGLRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYGF 115
L GL P+ +T Y+++A AA G+ +H + KLG F
Sbjct: 97 LHNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVF 138
Score = 39.3 bits (90), Expect(2) = 9e-12
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1
Query: 115 SKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
SKLG + FV ++L+ Y V G V +AR VFDEMP
Sbjct: 132 SKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMP 167
>ref|XP_011464226.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Fragaria vesca subsp. vesca]
Length = 578
Score = 58.2 bits (139), Expect(2) = 1e-11
Identities = 27/84 (32%), Positives = 49/84 (58%)
Frame = -2
Query: 369 YTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGLRPNGHTYMYLIR 190
Y H++FL +PHP+ F+ N+II S G + L+ Y+ ML + P+ +T+ +I+
Sbjct: 58 YAHNLFLSVPHPDSFLFNSIIN---SSSKFGFPQYTLSFYRSMLAFAMPPSSYTFTSVIK 114
Query: 189 ALAARFSIRQGEEIHTWVLKLGYG 118
A A +++ G+ +H+ V + G G
Sbjct: 115 ACADLSALKLGQGVHSHVFRFGCG 138
Score = 37.7 bits (86), Expect(2) = 1e-11
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
+ + G G +FV +ALV Y G AR+VFDEMP
Sbjct: 132 VFRFGCGSERFVQAALVSLYAKCGEFRVARKVFDEMP 168
>gb|KHN02018.1| Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 518
Score = 56.6 bits (135), Expect(2) = 1e-11
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = -2
Query: 411 ICRLLA---SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHM 241
+ RLLA P TY +F +I HP L ICNTIIK + + N T H V+ M
Sbjct: 40 LSRLLAFCSHPYQGSLTYACRVFERIHHPTLCICNTIIKTFLLNGNFYGTFH---VFTKM 96
Query: 240 LEIGLRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYGF 115
L GL P+ +T Y+++A AA G+ +H + KLG F
Sbjct: 97 LHNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVF 138
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -1
Query: 115 SKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
SKLG + FV ++L+ Y V G V +AR VFDEMP
Sbjct: 132 SKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMP 167
>ref|XP_004295634.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Fragaria vesca subsp. vesca]
Length = 611
Score = 61.6 bits (148), Expect(2) = 2e-11
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = -2
Query: 399 LASPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGLRP 220
L+SP +Y H IF QI HPN+F NT+I+ +S N + +Y+ M + P
Sbjct: 84 LSSP----MSYAHHIFSQIKHPNVFTWNTMIRGYAESQNP---MPVIQLYRQMRVSCIEP 136
Query: 219 NGHTYMYLIRALAARFSIRQGEEIHTWVLKLG 124
+ HTY +L++A+A +R+GE++H L+ G
Sbjct: 137 DTHTYPFLLKAVAKLLDVREGEKVHCIALRNG 168
Score = 33.1 bits (74), Expect(2) = 2e-11
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 88 FVSSALVGFYVVLGHVESARRVFDEMPE 5
FV +AL+ Y V G VESA +VF+ M E
Sbjct: 174 FVKNALLHLYAVCGQVESAHKVFESMSE 201
>ref|XP_012090548.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Jatropha curcas]
gi|643706382|gb|KDP22514.1| hypothetical protein
JCGZ_26345 [Jatropha curcas]
Length = 611
Score = 54.7 bits (130), Expect(2) = 2e-11
Identities = 26/85 (30%), Positives = 47/85 (55%)
Frame = -2
Query: 378 DFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGLRPNGHTYMY 199
D +++HS+F QI +PN+F N + K S +T+Y ML+ G P+ +T+ +
Sbjct: 62 DLSFSHSLFSQIQNPNIFAYNFMFKAYSHSSTP---VEAITLYNLMLKNGTFPDNYTFPF 118
Query: 198 LIRALAARFSIRQGEEIHTWVLKLG 124
+ + ++ +G+E+H LKLG
Sbjct: 119 IFKVCGRLLALNKGQEVHALSLKLG 143
Score = 40.0 bits (92), Expect(2) = 2e-11
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1
Query: 112 KLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
KLG Y FV +ALV Y G ++ ARRVFDE+P
Sbjct: 141 KLGLEYDVFVQNALVSMYSFCGKLKIARRVFDEVP 175
>ref|XP_009134331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Brassica rapa]
Length = 583
Score = 62.8 bits (151), Expect(2) = 2e-11
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Frame = -2
Query: 402 LLASPALVDFTYTHSIFLQIPHP-NLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGL 226
L++ P+ +Y H IF +I P N+FI NT+I+ ++C+ + L++++ M GL
Sbjct: 47 LVSLPSPPPMSYAHKIFSEIEKPFNVFIWNTLIRGYAETCD---SVSALSLFREMRVSGL 103
Query: 225 -RPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGYG 118
P+ HTY +L++A+A +R GE IH+ V++ G+G
Sbjct: 104 VEPDTHTYPFLLKAVAKMADVRLGETIHSVVIRSGFG 140
Score = 32.0 bits (71), Expect(2) = 2e-11
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
+ + GFG F ++L+ Y G V SA +VFDEMP
Sbjct: 134 VIRSGFGSLIFAQNSLLHLYGNCGDVVSAYKVFDEMP 170
>ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Solanum tuberosum]
Length = 530
Score = 54.7 bits (130), Expect(2) = 3e-11
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = -2
Query: 411 ICRLLA---SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHM 241
+ RLLA P L Y IF QI P + I NT+IK + ++ L +Y++M
Sbjct: 40 LSRLLAFCSHPNLGSPIYGFKIFEQIQEPTICIFNTMIKSFLLKGDNELN-RITEIYKNM 98
Query: 240 LEIGLRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGY 121
L+IG+ P+ +T Y+++A S GE +H +LKLG+
Sbjct: 99 LKIGMYPDNYTLPYVLKACGRMKSFHLGELVHGQILKLGF 138
Score = 40.0 bits (92), Expect(2) = 3e-11
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
I KLGF FV ++L+GFY +VE+AR VF E+P
Sbjct: 133 ILKLGFLIDTFVGNSLIGFYTCFDNVEAARSVFYEIP 169
>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338275|gb|EFH68692.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 741
Score = 57.8 bits (138), Expect(2) = 3e-11
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = -2
Query: 393 SPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHP---LTVYQHMLEIGLR 223
SP Y S+F I PNL I NT+ + L+ P L +Y M+ +GL
Sbjct: 78 SPHFDGLPYAISVFETIQEPNLLIWNTMFR------GHALSSDPVSALKLYVCMISLGLL 131
Query: 222 PNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGY 121
PN +T+ +L+++ A + ++G++IH VLKLGY
Sbjct: 132 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGY 165
Score = 36.6 bits (83), Expect(2) = 3e-11
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMP 8
+ KLG+ FV ++L+ YV G +E AR+VFD P
Sbjct: 160 VLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSP 196
>ref|XP_008371807.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Malus domestica]
Length = 622
Score = 58.9 bits (141), Expect(2) = 3e-11
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = -2
Query: 372 TYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIGLRPNGHTYMYLI 193
+Y H IF QI +PN+F NT+I+ + N + +Y M + ++P+ HTY +L+
Sbjct: 100 SYAHQIFSQIKNPNVFTWNTMIRGYAECQNP---VPVIQLYHQMHQSSVQPDTHTYPFLL 156
Query: 192 RALAARFSIRQGEEIHTWVLKLGY 121
+A+A + +GE+IH+ V++ G+
Sbjct: 157 KAVAKLMDVGEGEKIHSVVVRNGF 180
Score = 35.4 bits (80), Expect(2) = 3e-11
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 106 GFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
GF FV +AL+ Y GHVESA +VF+ M E
Sbjct: 179 GFESLVFVKNALLHVYACCGHVESAHKVFESMSE 212
>ref|XP_002269101.2| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial [Vitis vinifera]
Length = 609
Score = 61.2 bits (147), Expect(2) = 3e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = -2
Query: 405 RLLASPALVDFTYTHSIFLQIPHPNLFICNTIIKKLVDSCNDGLTCHPLTVYQHMLEIG- 229
R+L +L D Y +F QI +PN F+ N +I+ S + H + +Y MLE G
Sbjct: 68 RILHFSSLHDLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQ--HAIALYHRMLEQGS 125
Query: 228 LRPNGHTYMYLIRALAARFSIRQGEEIHTWVLKLGY 121
+ + HT+ ++++A A F++ +GE+IH +LKLG+
Sbjct: 126 VMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGF 161
Score = 33.1 bits (74), Expect(2) = 3e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -1
Query: 118 ISKLGFGYSQFVSSALVGFYVVLGHVESARRVFDEMPE 5
I KLGF +++++LV FY ++ A+ VFD M E
Sbjct: 156 ILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSE 193