BLASTX nr result
ID: Cinnamomum25_contig00021652
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00021652
(424 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1... 103 1e-35
ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus flo... 140 3e-31
ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis ... 124 3e-26
gb|AFK49064.1| unknown [Lotus japonicus] 114 3e-23
ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus tr... 94 3e-17
gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays] 86 1e-14
ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitun... 75 2e-14
ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas re... 70 5e-13
ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [S... 67 6e-12
ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arab... 76 8e-12
ref|XP_002519781.1| conserved hypothetical protein [Ricinus comm... 69 1e-09
gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays] 64 4e-08
ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococ... 63 9e-08
>emb|CAA30522.1| ORF 143 [Glycine max] gi|734402603|gb|KHN32086.1| Putative 8.8 kDa
protein in rps12-tRNA-Val intergenic region [Glycine
soja]
Length = 143
Score = 103 bits (256), Expect(2) = 1e-35
Identities = 53/62 (85%), Positives = 54/62 (87%)
Frame = -1
Query: 307 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 128
MRQKIFFLK+FDSEL YVQG I K FQRFSLTLSVSTNNSK LDFFR GPSQIAMIRST
Sbjct: 1 MRQKIFFLKKFDSELRYVQGPIWKEFQRFSLTLSVSTNNSKCLDFFRIGPSQIAMIRSTL 60
Query: 127 FY 122
Y
Sbjct: 61 HY 62
Score = 73.2 bits (178), Expect(2) = 1e-35
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = -3
Query: 125 LHYFGNLRTRSYGYVKYRISNPSRKRRETATQFKVSKQNSI 3
LHYFGN RT+SYGYVKYRISNPSRKR T TQF+VSKQNSI
Sbjct: 60 LHYFGNPRTQSYGYVKYRISNPSRKRGGTDTQFQVSKQNSI 100
>ref|NP_862801.1| hypothetical protein CafeCp090 [Calycanthus floridus var. glaucus]
gi|32480905|ref|NP_862814.1| hypothetical protein
CafeCp092 [Calycanthus floridus var. glaucus]
gi|75146241|sp|Q7Y618.1|YCX1_CALFG RecName:
Full=Uncharacterized 8.8 kDa protein in rps12-tRNA-Val
intergenic region (chloroplast) [Calycanthus floridus
var. glaucus] gi|32399427|emb|CAD28768.1| hypothetical
protein [Calycanthus floridus var. glaucus]
gi|32399441|emb|CAD28782.1| hypothetical protein
[Calycanthus floridus var. glaucus]
Length = 75
Score = 140 bits (353), Expect = 3e-31
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = -1
Query: 307 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 128
MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIA IRSTS
Sbjct: 1 MRQKIFFLKRFDSELLYVQGSILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIATIRSTS 60
Query: 127 FYTISET*GLDRMDM 83
FYTISET GL+RMDM
Sbjct: 61 FYTISETQGLNRMDM 75
>ref|YP_358631.1| hypothetical protein PhapfoPp085 [Phalaenopsis aphrodite subsp.
formosana] gi|58802847|gb|AAW82567.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 77
Score = 124 bits (310), Expect = 3e-26
Identities = 65/75 (86%), Positives = 66/75 (88%)
Frame = +3
Query: 126 KEVLRIIAI*LGPVLKKSRYFELFVDTDKVRENL*NDFNIEPWTYNSSESNLFRKKIFCL 305
KEVLRIIAI LGPVLKKSRYFELFVDTDK RENL N NI PWTY+SSESNLFRKK FCL
Sbjct: 3 KEVLRIIAIGLGPVLKKSRYFELFVDTDKGRENLLNYSNIGPWTYSSSESNLFRKKSFCL 62
Query: 306 MVACSSPLTKLS*LG 350
MVACSSPL KLS LG
Sbjct: 63 MVACSSPLPKLSLLG 77
>gb|AFK49064.1| unknown [Lotus japonicus]
Length = 128
Score = 114 bits (285), Expect = 3e-23
Identities = 62/87 (71%), Positives = 68/87 (78%)
Frame = -3
Query: 263 IICPRFNIEIISEVFPYFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHYFGNLRTRSYGY 84
+ICPR NIE ISEVF FVRVNKQFE+PRLF R + LHYF NLRT+SYGY
Sbjct: 1 MICPRSNIERISEVFLDFVRVNKQFEMPRLF--RLGPSQIAMIRSTLHYFENLRTQSYGY 58
Query: 83 VKYRISNPSRKRRETATQFKVSKQNSI 3
VKYRISNPS+KRRET TQF+VSKQNSI
Sbjct: 59 VKYRISNPSKKRRETDTQFQVSKQNSI 85
>ref|YP_001109550.1| hypothetical protein Poptr_cp072 [Populus trichocarpa]
gi|134093268|ref|YP_001109569.1| hypothetical protein
Poptr_cp092 [Populus trichocarpa]
gi|133712111|gb|ABO36754.1| conserved hypothetical
protein [Populus trichocarpa]
gi|133712130|gb|ABO36773.1| conserved hypothetical
protein [Populus trichocarpa]
Length = 65
Score = 94.4 bits (233), Expect = 3e-17
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = -1
Query: 217 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISET*GLDRMDM*NTGFPILA 56
+TLSVSTNNSK LDFFR GPSQIAMIRSTSFYTISET GL+RMDM NTGFPILA
Sbjct: 1 MTLSVSTNNSKCLDFFRAGPSQIAMIRSTSFYTISETQGLNRMDMENTGFPILA 54
>gb|AFW59336.1| hypothetical protein ZEAMMB73_738558 [Zea mays]
Length = 52
Score = 85.5 bits (210), Expect = 1e-14
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = -3
Query: 251 RFNIEIISEVFPYFVRVNKQFEIPRLF*NRSESNSNDSKHFFLHY 117
+ N+EI+SEVFPYFVRVNKQFEIPRLF NRSESNSNDSKHFF HY
Sbjct: 3 KVNMEILSEVFPYFVRVNKQFEIPRLFQNRSESNSNDSKHFFFHY 47
>ref|YP_001312254.1| hypothetical protein CYtaCp089 [Cycas taitungensis]
gi|150251552|ref|YP_001312284.1| hypothetical protein
CYtaCp120 [Cycas taitungensis]
gi|149941571|dbj|BAF64995.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
gi|149941602|dbj|BAF65026.1| hypothetical protein
(chloroplast) [Cycas taitungensis]
Length = 64
Score = 74.7 bits (182), Expect(2) = 2e-14
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +2
Query: 41 FPSFSC*DWKSCILHIHTIESLGFRNSVKR-SASNHCYLTRTCSKKVEVF 187
F FSC DWKS ILHI TI+SLG + SVK+ S SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSVKKKSVSNHCYLTRTCSKKVEVF 64
Score = 30.8 bits (68), Expect(2) = 2e-14
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 3 YGILFTHFKLSSRFPPF 53
Y ILFTHFKLS RF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|YP_007474607.1| hypothetical_protein (chloroplast) [Cycas revoluta]
gi|372863084|gb|AEX99157.1| hypothetical_protein
(chloroplast) [Cycas revoluta]
Length = 60
Score = 69.7 bits (169), Expect(2) = 5e-13
Identities = 36/49 (73%), Positives = 38/49 (77%)
Frame = +2
Query: 41 FPSFSC*DWKSCILHIHTIESLGFRNSVKRSASNHCYLTRTCSKKVEVF 187
F FSC DWKS ILHI TI+SLG + SV SNHCYLTRTCSKKVEVF
Sbjct: 15 FLPFSCYDWKSRILHICTIKSLGSQKSV---VSNHCYLTRTCSKKVEVF 60
Score = 30.8 bits (68), Expect(2) = 5e-13
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +3
Query: 3 YGILFTHFKLSSRFPPF 53
Y ILFTHFKLS RF PF
Sbjct: 2 YIILFTHFKLSIRFLPF 18
>ref|XP_002449659.1| hypothetical protein SORBIDRAFT_05g021128 [Sorghum bicolor]
gi|241935502|gb|EES08647.1| hypothetical protein
SORBIDRAFT_05g021128, partial [Sorghum bicolor]
Length = 67
Score = 67.0 bits (162), Expect(2) = 6e-12
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 247 SILKSFQRFSLTLSVSTNNSKYLDFFRTGPSQIAMIRSTS 128
SI K F+RFSLTLSVSTN+SKYLDF R GPSQIAMIRSTS
Sbjct: 9 SIWKLFERFSLTLSVSTNSSKYLDFLRIGPSQIAMIRSTS 48
Score = 30.0 bits (66), Expect(2) = 6e-12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 135 ALLFTLFRKPKDSIVWICKI 76
+L TLF+K KDSIVWI KI
Sbjct: 48 SLSITLFQKCKDSIVWIWKI 67
>ref|XP_002894684.1| hypothetical protein ARALYDRAFT_892903 [Arabidopsis lyrata subsp.
lyrata] gi|297340526|gb|EFH70943.1| hypothetical protein
ARALYDRAFT_892903 [Arabidopsis lyrata subsp. lyrata]
Length = 60
Score = 76.3 bits (186), Expect = 8e-12
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = -1
Query: 217 LTLSVSTNNSKYLDFFRTGPSQIAMIRSTSFYTISET*GLDRMDM 83
+TLSVSTNNSK LDFFRT PSQIAMIRST FYTISET GL+RMDM
Sbjct: 16 VTLSVSTNNSKCLDFFRTDPSQIAMIRSTYFYTISETQGLNRMDM 60
>ref|XP_002519781.1| conserved hypothetical protein [Ricinus communis]
gi|223541020|gb|EEF42577.1| conserved hypothetical
protein [Ricinus communis]
Length = 286
Score = 68.9 bits (167), Expect = 1e-09
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +3
Query: 3 YGILFTHFKLSSRFPPFPARIGNPVFYISIRSSP*VSEIV 122
YGILFTHFKLS PPFPARIGNPVFYISIR SP VS+IV
Sbjct: 247 YGILFTHFKLSICSPPFPARIGNPVFYISIRLSPRVSKIV 286
>gb|AFW69302.1| hypothetical protein ZEAMMB73_079346 [Zea mays]
Length = 53
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = +3
Query: 3 YGILFTHFKLSSRFPPFPARIGNPVFYISIRSSP 104
YGILFTHFKLS FPPFPAR GNPVF ISIRSSP
Sbjct: 20 YGILFTHFKLSICFPPFPARTGNPVFSISIRSSP 53
>ref|YP_009145083.1| ribosomal protein S12 (chloroplast) [Podococcus barteri]
gi|836614536|ref|YP_009145127.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521025|gb|AKJ85882.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
gi|827521026|gb|AKJ85883.1| ribosomal protein S12
(chloroplast) [Podococcus barteri]
Length = 121
Score = 62.8 bits (151), Expect = 9e-08
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -3
Query: 95 SYGYVKYRISNPSRKRRETATQFKVSKQNSI 3
SYGYVKYRISNPSRKRRET TQFKVSKQNSI
Sbjct: 48 SYGYVKYRISNPSRKRRETDTQFKVSKQNSI 78