BLASTX nr result

ID: Cinnamomum25_contig00020477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00020477
         (325 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16010.3| unnamed protein product [Vitis vinifera]               43   7e-08
ref|XP_012471219.1| PREDICTED: serine/arginine-rich splicing fac...    56   8e-06

>emb|CBI16010.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 43.1 bits (100), Expect(2) = 7e-08
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -1

Query: 325 RCIKYLDRSVLEGRVITVEK 266
           RCIKYLDRSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124



 Score = 40.0 bits (92), Expect(2) = 7e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = -2

Query: 267 RVAVCSSSSPNFKSLTTTNQSQIKLPQANIRL 172
           +VAVCSSSSP+FKSLTT   +Q    QANIRL
Sbjct: 124 KVAVCSSSSPDFKSLTTKPSNQTH--QANIRL 153


>ref|XP_012471219.1| PREDICTED: serine/arginine-rich splicing factor SR45a isoform X2
           [Gossypium raimondii]
          Length = 138

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 31/40 (77%), Positives = 32/40 (80%), Gaps = 5/40 (12%)
 Frame = -1

Query: 325 RCIKYLDRSVLEGRVITVEK-----GSCV*QLFTKLQKPY 221
           RCIKYL+RSVLEGRVITVEK      SCV QLFTKLQK Y
Sbjct: 98  RCIKYLNRSVLEGRVITVEKFLWQQVSCVLQLFTKLQKSY 137


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