BLASTX nr result
ID: Cinnamomum25_contig00019924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00019924
(251 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010100330.1| Cleavage and polyadenylation specificity fac... 110 5e-22
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec... 110 5e-22
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 110 5e-22
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 110 5e-22
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 108 1e-21
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 108 1e-21
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 107 3e-21
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 107 3e-21
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 106 5e-21
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 106 5e-21
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec... 106 5e-21
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec... 106 7e-21
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal... 106 7e-21
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec... 105 1e-20
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 105 1e-20
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 105 1e-20
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 105 1e-20
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 105 1e-20
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 105 1e-20
ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation spec... 103 3e-20
>ref|XP_010100330.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis] gi|587893932|gb|EXB82464.1| Cleavage and
polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 110 bits (274), Expect = 5e-22
Identities = 49/64 (76%), Positives = 56/64 (87%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+GH+FNGRACVVAFASPQT++QMG AYM+KNQ Q Q Q GRRP+NDGVGRGG
Sbjct: 280 CKEGMHGHVFNGRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNP 339
Query: 69 NYQS 58
N+QS
Sbjct: 340 NFQS 343
>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Prunus mume]
Length = 647
Score = 110 bits (274), Expect = 5e-22
Identities = 48/64 (75%), Positives = 58/64 (90%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+G++FNGRACVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDGVGRGGG
Sbjct: 291 CKEGMDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNDGVGRGGGV 350
Query: 69 NYQS 58
NYQ+
Sbjct: 351 NYQT 354
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 110 bits (274), Expect = 5e-22
Identities = 49/64 (76%), Positives = 54/64 (84%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CK+GMNGH+FNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRPMNDG GRGG
Sbjct: 290 CKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNM 349
Query: 69 NYQS 58
NYQS
Sbjct: 350 NYQS 353
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 110 bits (274), Expect = 5e-22
Identities = 49/64 (76%), Positives = 54/64 (84%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CK+GMNGH+FNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q GRRPMNDG GRGG
Sbjct: 290 CKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNM 349
Query: 69 NYQS 58
NYQS
Sbjct: 350 NYQS 353
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein,
putative [Ricinus communis]
Length = 644
Score = 108 bits (271), Expect = 1e-21
Identities = 49/63 (77%), Positives = 53/63 (84%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNGH+FNGRACVVAFAS QT++QMG +YMNKNQ Q Q Q GRRPMNDG GRGG
Sbjct: 277 CKEGMNGHLFNGRACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNM 336
Query: 69 NYQ 61
NYQ
Sbjct: 337 NYQ 339
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 108 bits (270), Expect = 1e-21
Identities = 47/64 (73%), Positives = 58/64 (90%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+G++FNGRACVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMN+GVGRGGG
Sbjct: 261 CKEGMDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGV 320
Query: 69 NYQS 58
NYQ+
Sbjct: 321 NYQT 324
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 107 bits (267), Expect = 3e-21
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CK+GMNGH+FNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q G RPMNDG GRGG +
Sbjct: 287 CKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNT 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 107 bits (267), Expect = 3e-21
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CK+GMNGH+FNGR CVVAFASPQT++QMG +YMNKNQ Q Q Q G RPMNDG GRGG +
Sbjct: 287 CKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNT 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
isoform X2 [Vitis vinifera]
gi|731372811|ref|XP_010650886.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185
isoform X2 [Vitis vinifera]
Length = 650
Score = 106 bits (265), Expect = 5e-21
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNG++FNGRACVVAFASPQT++QMG +YMNK QAQ Q Q GRRPMNDGVGRGGG
Sbjct: 289 CKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQ--GRRPMNDGVGRGGGM 346
Query: 69 NYQ 61
N Q
Sbjct: 347 NMQ 349
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Vitis vinifera]
Length = 656
Score = 106 bits (265), Expect = 5e-21
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNG++FNGRACVVAFASPQT++QMG +YMNK QAQ Q Q GRRPMNDGVGRGGG
Sbjct: 295 CKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQ--GRRPMNDGVGRGGGM 352
Query: 69 NYQ 61
N Q
Sbjct: 353 NMQ 355
>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas]
gi|802723858|ref|XP_012085541.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|643714040|gb|KDP26705.1|
hypothetical protein JCGZ_17863 [Jatropha curcas]
Length = 651
Score = 106 bits (265), Expect = 5e-21
Identities = 48/63 (76%), Positives = 52/63 (82%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNGH+FNGR CVVAFASPQT++QMG +YMNK Q Q Q Q RRPMNDGVGRGG
Sbjct: 284 CKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQPQTQNQARRPMNDGVGRGGNM 343
Query: 69 NYQ 61
NYQ
Sbjct: 344 NYQ 346
>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Pyrus x bretschneideri]
Length = 656
Score = 106 bits (264), Expect = 7e-21
Identities = 46/64 (71%), Positives = 57/64 (89%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+G++FNGRACVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDG GRGGG
Sbjct: 290 CKEGMDGYVFNGRACVVAFASPQTLKQMGASYLSKSQGQAQAQQPGRRPMNDGGGRGGGV 349
Query: 69 NYQS 58
N+Q+
Sbjct: 350 NFQA 353
>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
protein FUS-like [Malus domestica]
Length = 658
Score = 106 bits (264), Expect = 7e-21
Identities = 46/64 (71%), Positives = 57/64 (89%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+G++FNGRACVVAFASPQT++QMG +Y++K+Q Q Q Q PGRRPMNDGVGRG G
Sbjct: 290 CKEGMDGYVFNGRACVVAFASPQTLKQMGASYLSKSQXQAQAQQPGRRPMNDGVGRGAGV 349
Query: 69 NYQS 58
N+Q+
Sbjct: 350 NFQA 353
>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Jatropha curcas]
gi|802723892|ref|XP_012085552.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 6-like
[Jatropha curcas] gi|802723894|ref|XP_012085553.1|
PREDICTED: cleavage and polyadenylation specificity
factor subunit 6-like [Jatropha curcas]
gi|643714049|gb|KDP26714.1| hypothetical protein
JCGZ_17872 [Jatropha curcas]
Length = 656
Score = 105 bits (262), Expect = 1e-20
Identities = 47/63 (74%), Positives = 51/63 (80%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNGH+FNGR CVVAFASPQT++QMG +YMNK Q Q Q Q GRRPMNDG GRG
Sbjct: 285 CKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQSQTQNQGRRPMNDGAGRGDNM 344
Query: 69 NYQ 61
NYQ
Sbjct: 345 NYQ 347
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 105 bits (262), Expect = 1e-20
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNG+MFNGRACVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG
Sbjct: 288 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNL 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 105 bits (262), Expect = 1e-20
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNG+MFNGRACVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG
Sbjct: 288 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNL 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 105 bits (262), Expect = 1e-20
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNG+MFNGRACVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG
Sbjct: 288 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNL 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 105 bits (262), Expect = 1e-20
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGMNG+MFNGRACVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP N+G+GRGG
Sbjct: 288 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNL 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 105 bits (262), Expect = 1e-20
Identities = 49/64 (76%), Positives = 55/64 (85%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+G+MFNGRACVVAFASPQT++QMG +YMNKNQ Q Q Q GRRP NDG+GRGG
Sbjct: 288 CKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNM 346
Query: 69 NYQS 58
NYQS
Sbjct: 347 NYQS 350
>ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Sesamum indicum]
Length = 643
Score = 103 bits (258), Expect = 3e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = -3
Query: 249 CKEGMNGHMFNGRACVVAFASPQTVRQMGTAYMNKNQAQGQPQVPGRRPMNDGVGRGGGS 70
CKEGM+GH+FNGRACVVAFA+PQT++QMG++YMNK Q QGQ Q GR +NDG GRG G+
Sbjct: 285 CKEGMHGHLFNGRACVVAFATPQTIKQMGSSYMNKTQTQGQSQQQGRNLINDGAGRGNGT 344
Query: 69 NYQS 58
NY S
Sbjct: 345 NYPS 348