BLASTX nr result

ID: Cinnamomum25_contig00019415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00019415
         (695 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    84   6e-14
gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]...    67   7e-09

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 84.3 bits (207), Expect = 6e-14
 Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
 Frame = +2

Query: 65  SMISSRTKHESFDSFGSHTQLLNGSFHLF--*CNEPTLSSLFVFQ-DIKTDTRPEYSEDS 235
           S+I SRTKHESFDSFGSH QLL  + H+F   CNEP  SSLF+FQ DI+T+  P+YSEDS
Sbjct: 13  SIIPSRTKHESFDSFGSHAQLLKVNSHIFFYECNEPIFSSLFIFQKDIETNVIPKYSEDS 72

Query: 236 SDPTKNL 256
           SD  KN+
Sbjct: 73  SDKIKNM 79


>gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224350|prf||1102209D ORF 4
          Length = 64

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = -3

Query: 345 MLNR*PMSKIRRIFWI*RKQKKRNNFADNDRFFVGSEESSEYSGLVSVLIS-WNTNREER 169
           MLNR P+  + +  ++  K+KKRNNFADN  FF+ SEESSEY G+  V IS WN N+EE+
Sbjct: 1   MLNRRPI--LSKKSFLDLKKKKRNNFADNYIFFILSEESSEYFGITLVSISFWNMNKEEK 58

Query: 168 VGSLH 154
           +GSLH
Sbjct: 59  IGSLH 63


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