BLASTX nr result
ID: Cinnamomum25_contig00019144
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum25_contig00019144 (250 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ... 69 9e-10 emb|CBI36057.3| unnamed protein product [Vitis vinifera] 59 1e-06 ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair ... 57 4e-06 >ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Nelumbo nucifera] gi|719979495|ref|XP_010249498.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Nelumbo nucifera] Length = 1160 Score = 69.3 bits (168), Expect = 9e-10 Identities = 37/83 (44%), Positives = 50/83 (60%) Frame = -2 Query: 249 LGSTLIARGSHDTEKDYFFSGVKGLQTLATFPGSSMPISKAICEKVLTMFVSIITGRCXX 70 L S+L+ + +SGVKGL+TLATFPG +PISK+I E +LT+F+SI+T C Sbjct: 500 LSSSLVTSMKQENCDANIYSGVKGLRTLATFPGWFLPISKSIFENILTVFMSILTAGCEE 559 Query: 69 XXXXXXXXXXLIQIGTFIESSYD 1 L+QIGTF E +D Sbjct: 560 TLLWKLSLKALVQIGTFTEKFHD 582 >emb|CBI36057.3| unnamed protein product [Vitis vinifera] Length = 1146 Score = 58.9 bits (141), Expect = 1e-06 Identities = 35/81 (43%), Positives = 45/81 (55%) Frame = -2 Query: 243 STLIARGSHDTEKDYFFSGVKGLQTLATFPGSSMPISKAICEKVLTMFVSIITGRCXXXX 64 S L A D + +SGVKGLQ LATFPG +PISK+I E VL F+SII Sbjct: 501 SVLDASTDKDAYEADIYSGVKGLQILATFPGEFLPISKSIFENVLLTFISIIVEDFNKTL 560 Query: 63 XXXXXXXXLIQIGTFIESSYD 1 L+QIG+FI+ ++ Sbjct: 561 LWKLALKALVQIGSFIDRFHE 581 >ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix dactylifera] Length = 1153 Score = 57.4 bits (137), Expect = 4e-06 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 5/88 (5%) Frame = -2 Query: 249 LGSTLIARGS-----HDTEKDYFFSGVKGLQTLATFPGSSMPISKAICEKVLTMFVSIIT 85 LGS L+A GS ++T ++ VKGLQ LA FPG +PIS+ + E +L + VS++T Sbjct: 500 LGSALVAVGSSELVSNNTGHEHAIYEVKGLQVLAMFPGCYLPISEDVYEYILVILVSMVT 559 Query: 84 GRCXXXXXXXXXXXXLIQIGTFIESSYD 1 R LI+IG+FIE +D Sbjct: 560 ERFEDTFLWKLSVKALIEIGSFIEKHHD 587