BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00019141
         (627 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010269879.1| PREDICTED: pentatricopeptide repeat-containi...   159   8e-37
ref|XP_010274574.1| PREDICTED: pentatricopeptide repeat-containi...   156   7e-36
ref|XP_010644689.1| PREDICTED: pentatricopeptide repeat-containi...   156   9e-36
emb|CBI29222.3| unnamed protein product [Vitis vinifera]              156   9e-36
gb|KDO46397.1| hypothetical protein CISIN_1g003295mg [Citrus sin...   153   6e-35
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr...   153   6e-35
gb|KHG16388.1| hypothetical protein F383_21662 [Gossypium arboreum]   153   8e-35
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss...   148   2e-33
ref|XP_012466482.1| PREDICTED: pentatricopeptide repeat-containi...   146   7e-33
ref|XP_011465300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   141   2e-31
ref|XP_010922654.1| PREDICTED: pentatricopeptide repeat-containi...   140   5e-31
ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prun...   139   2e-30
ref|XP_009342743.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   138   2e-30
ref|XP_008227937.1| PREDICTED: pentatricopeptide repeat-containi...   138   2e-30
ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily pr...   138   2e-30
ref|XP_010677535.1| PREDICTED: pentatricopeptide repeat-containi...   137   3e-30
ref|XP_009338802.1| PREDICTED: pentatricopeptide repeat-containi...   137   3e-30
ref|XP_012083902.1| PREDICTED: pentatricopeptide repeat-containi...   137   6e-30
gb|KDP28071.1| hypothetical protein JCGZ_19479 [Jatropha curcas]      137   6e-30
ref|XP_009604540.1| PREDICTED: pentatricopeptide repeat-containi...   134   4e-29

>ref|XP_010269879.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
           gi|720044416|ref|XP_010269880.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
           gi|720044419|ref|XP_010269881.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
          Length = 854

 Score =  159 bits (403), Expect = 8e-37
 Identities = 90/195 (46%), Positives = 118/195 (60%)
 Frame = -3

Query: 595 QSQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINP 416
           Q Q  P    P   ++L K  + ILS  SL+  K +E L  LSP  FDRL F+++ S+NP
Sbjct: 39  QQQPLPPPPPPYDRSILNKVAS-ILSNKSLDTSKCREVLCHLSPHHFDRLFFDMRDSVNP 97

Query: 415 KTALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAA 236
           KTAL+FFT AS +  F FT+RSY +LI LL+ S                 +PV+F+N   
Sbjct: 98  KTALNFFTFASQSLGFRFTVRSYCLLISLLVGSNTIVPARLLLIRLIDGNVPVIFDNRND 157

Query: 235 AHLEIARSLVDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
            HLEIAR++    A   ST++  DLL+HVYC+QF+  GL + FDVF+ + G   FPS KT
Sbjct: 158 RHLEIARAI----AGSSSTTSVFDLLVHVYCTQFKNLGLGIAFDVFQLLTGHGQFPSLKT 213

Query: 55  CNFLLNSLVKAGEFQ 11
           CNFLL SLVKA E +
Sbjct: 214 CNFLLGSLVKANELE 228


>ref|XP_010274574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
           gi|720059440|ref|XP_010274575.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Nelumbo nucifera]
          Length = 856

 Score =  156 bits (395), Expect = 7e-36
 Identities = 90/201 (44%), Positives = 118/201 (58%)
 Frame = -3

Query: 610 HHQKAQSQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQ 431
           H Q  +    P+   P   + L K +T ILS  SL+  K +E L+ +SP  FD + FE++
Sbjct: 36  HEQHPKQPPAPTPPPPYDQHFLNK-VTSILSSKSLDTSKCREALSHISPHHFDHIFFELR 94

Query: 430 PSINPKTALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLF 251
            S NPKTAL+FFT AS +  F FT+RSY ILI LL+ S                 +P LF
Sbjct: 95  SSTNPKTALNFFTFASQSVGFRFTVRSYCILINLLVGSNLIFPARLLLIRLIDGNVPALF 154

Query: 250 ENPAAAHLEIARSLVDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLF 71
           E P   HLEIA++++DS     S  +  DLL+HVYC+QF+  GLEL FDVF+ +    LF
Sbjct: 155 EKPNDRHLEIAQAVIDS----NSAVSTFDLLVHVYCTQFKNLGLELAFDVFQLLTSHGLF 210

Query: 70  PSRKTCNFLLNSLVKAGEFQR 8
            S KT NFLL+SLVK  E +R
Sbjct: 211 LSLKTSNFLLDSLVKVNELER 231


>ref|XP_010644689.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
           gi|731382358|ref|XP_010644698.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
           gi|731382360|ref|XP_010644702.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 842

 Score =  156 bits (394), Expect = 9e-36
 Identities = 89/197 (45%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
 Frame = -3

Query: 592 SQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPK 413
           SQ+QP + D    + L K++T ILS PSL+  + K+ +  LSP  FD + F ++ ++NPK
Sbjct: 54  SQNQPPSSD----HALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPK 109

Query: 412 TALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAAA 233
           TAL+FF  ASD+  F FTLRSY +L+R L+ S                KLPVLF +P   
Sbjct: 110 TALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNR 169

Query: 232 HLEIARSLVDSPASGYS--TSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRK 59
           H+EIA ++ D    G S    AA+DLLIHVYC+QFR  G      VFR +A + +FP+ K
Sbjct: 170 HIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVK 229

Query: 58  TCNFLLNSLVKAGEFQR 8
           TC FLL+SLVKA E ++
Sbjct: 230 TCTFLLSSLVKANELEK 246


>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  156 bits (394), Expect = 9e-36
 Identities = 89/197 (45%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
 Frame = -3

Query: 592 SQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPK 413
           SQ+QP + D    + L K++T ILS PSL+  + K+ +  LSP  FD + F ++ ++NPK
Sbjct: 38  SQNQPPSSD----HALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPK 93

Query: 412 TALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAAA 233
           TAL+FF  ASD+  F FTLRSY +L+R L+ S                KLPVLF +P   
Sbjct: 94  TALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNR 153

Query: 232 HLEIARSLVDSPASGYS--TSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRK 59
           H+EIA ++ D    G S    AA+DLLIHVYC+QFR  G      VFR +A + +FP+ K
Sbjct: 154 HIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVK 213

Query: 58  TCNFLLNSLVKAGEFQR 8
           TC FLL+SLVKA E ++
Sbjct: 214 TCTFLLSSLVKANELEK 230


>gb|KDO46397.1| hypothetical protein CISIN_1g003295mg [Citrus sinensis]
          Length = 833

 Score =  153 bits (387), Expect = 6e-35
 Identities = 93/206 (45%), Positives = 118/206 (57%), Gaps = 6/206 (2%)
 Frame = -3

Query: 607 HQKAQSQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQP 428
           H + Q Q  P     NQ   L K ++ +LSK SL+  K K  L  LSP  FD L F I+ 
Sbjct: 36  HNRNQQQQPPPPQSSNQS--LLKWVSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRS 93

Query: 427 SINPKTALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLF- 251
           ++NPKTAL FF  AS + +F FT+RSY +LIRLLL S                K+PVL+ 
Sbjct: 94  NVNPKTALKFFYFASQSCNFRFTVRSYCLLIRLLLFSNLLSPARLLLIRLIDGKMPVLYA 153

Query: 250 ENPAAAHLEIARSLVD-----SPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMA 86
            NP+  H+EIA  +VD      PA G   +   DLL+HVYC+QF+  G     DVF   +
Sbjct: 154 SNPSIRHIEIASQMVDLNVTSEPALGVQIA---DLLVHVYCTQFKNLGFGYAIDVFSIFS 210

Query: 85  GECLFPSRKTCNFLLNSLVKAGEFQR 8
            + +FPS KTCNFLLNSLVKA E Q+
Sbjct: 211 SKGIFPSLKTCNFLLNSLVKANEVQK 236


>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
           gi|568835123|ref|XP_006471629.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568835125|ref|XP_006471630.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|557534991|gb|ESR46109.1| hypothetical protein
           CICLE_v10000274mg [Citrus clementina]
          Length = 833

 Score =  153 bits (387), Expect = 6e-35
 Identities = 93/206 (45%), Positives = 118/206 (57%), Gaps = 6/206 (2%)
 Frame = -3

Query: 607 HQKAQSQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQP 428
           H + Q Q  P     NQ   L K ++ +LSK SL+  K K  L  LSP  FD L F I+ 
Sbjct: 36  HNRNQQQQPPPPQSSNQS--LLKWVSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRS 93

Query: 427 SINPKTALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLF- 251
           ++NPKTAL FF  AS + +F FT+RSY +LIRLLL S                K+PVL+ 
Sbjct: 94  NVNPKTALKFFYFASQSCNFRFTVRSYCLLIRLLLFSNLLSPARLLLIRLIDGKMPVLYA 153

Query: 250 ENPAAAHLEIARSLVD-----SPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMA 86
            NP+  H+EIA  +VD      PA G   +   DLL+HVYC+QF+  G     DVF   +
Sbjct: 154 SNPSIRHIEIASQMVDLNVTSEPALGVQIA---DLLVHVYCTQFKNLGFGYAIDVFSIFS 210

Query: 85  GECLFPSRKTCNFLLNSLVKAGEFQR 8
            + +FPS KTCNFLLNSLVKA E Q+
Sbjct: 211 NKGIFPSLKTCNFLLNSLVKANEVQK 236


>gb|KHG16388.1| hypothetical protein F383_21662 [Gossypium arboreum]
          Length = 794

 Score =  153 bits (386), Expect = 8e-35
 Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 2/196 (1%)
 Frame = -3

Query: 589 QSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKT 410
           Q QPS+  P   +LL  AL+ ILSKPSL+  KSK+ L LLSP  FDR    + P  +PKT
Sbjct: 43  QRQPSSPPPVNQSLLD-ALSSILSKPSLDSSKSKQLLPLLSPADFDRFFIALSPRADPKT 101

Query: 409 ALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFEN--PAA 236
            L+FF LAS + +F FTLRSY ILI LLL S                KLP+   N  P+ 
Sbjct: 102 TLNFFHLASRSFNFRFTLRSYCILILLLLLSNNSSAARLLLIRLIDGKLPLFSPNSPPSV 161

Query: 235 AHLEIARSLVDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
            H++IA +L D   S +   A +DLL+H+YC+QF+  G     DVF  +A + +FPS KT
Sbjct: 162 NHIQIAIALADLNTS-FKGVAGVDLLLHIYCTQFKNVGFTYATDVFFTLADKGIFPSTKT 220

Query: 55  CNFLLNSLVKAGEFQR 8
           CNF LNSL+KA E Q+
Sbjct: 221 CNFFLNSLLKANEVQK 236


>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 846

 Score =  148 bits (374), Expect = 2e-33
 Identities = 90/196 (45%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
 Frame = -3

Query: 589 QSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKT 410
           Q QPS+  P   +LL   L+ ILSKPSL+  KSK+ L LLSP  FDR    + P  +PKT
Sbjct: 66  QRQPSSPPPVNQSLLD-TLSSILSKPSLDSSKSKQLLPLLSPSDFDRFFIALSPRADPKT 124

Query: 409 ALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFEN--PAA 236
            L+FF LAS   +F FTLRSY ILI LLL S                KLP+   N  P  
Sbjct: 125 TLNFFHLASRCFNFRFTLRSYYILILLLLLSNNSSAARLLLIRLIDGKLPLFSPNNPPTV 184

Query: 235 AHLEIARSLVDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
            H++IA +L D   S +   A +DLL+H+YC+QF+  G     DVF  +A + +FPS KT
Sbjct: 185 NHIQIAIALADLNTS-FKGVAGVDLLLHLYCTQFKNVGFTYAIDVFFTLAYKGIFPSTKT 243

Query: 55  CNFLLNSLVKAGEFQR 8
           CNF LNSL+KA E ++
Sbjct: 244 CNFFLNSLLKANEVRK 259


>ref|XP_012466482.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Gossypium raimondii]
           gi|763817666|gb|KJB84450.1| hypothetical protein
           B456_N026600 [Gossypium raimondii]
          Length = 846

 Score =  146 bits (369), Expect = 7e-33
 Identities = 89/196 (45%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
 Frame = -3

Query: 589 QSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKT 410
           Q QP +  P   +LL   L+ ILSKPSL+  KSK+ L LLSP  FDR    + P  +PKT
Sbjct: 66  QRQPPSPLPVNQSLLD-TLSSILSKPSLDSSKSKQLLPLLSPSDFDRFFIALSPRADPKT 124

Query: 409 ALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFEN--PAA 236
            L+FF LAS + +F FTLRSY ILI LLL S                KLP+   N  P  
Sbjct: 125 TLNFFHLASRSFNFRFTLRSYCILILLLLLSNNSSAARLLLIRLIDGKLPLFSPNNPPTV 184

Query: 235 AHLEIARSLVDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
            H++IA +L D   S +   A +DLL+H+YC+QF+  G     DVF  +A + +FPS KT
Sbjct: 185 NHIQIAIALADLNTS-FKGVAGVDLLLHLYCTQFKNVGFTYAIDVFFTLAYKGIFPSTKT 243

Query: 55  CNFLLNSLVKAGEFQR 8
           CNF LNSL+KA E ++
Sbjct: 244 CNFFLNSLLKANEVRK 259


>ref|XP_011465300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic [Fragaria vesca subsp.
           vesca]
          Length = 800

 Score =  141 bits (356), Expect = 2e-31
 Identities = 77/201 (38%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
 Frame = -3

Query: 595 QSQSQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINP 416
           Q  + P   +P  +N +      +LS PSL+  K +  + LLSP  FD L + I+ ++NP
Sbjct: 43  QPPTPPQPPNPGLLNWVSS----VLSNPSLDSSKCESLIPLLSPHQFDHLFYSIRSNVNP 98

Query: 415 KTALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAA 236
           KTALHFF  AS +  F FT+RS+ +L+ LL+ S                 +PVL+ +P++
Sbjct: 99  KTALHFFHFASQSFKFRFTVRSFCVLVHLLIASNLEAPARLLLIRLIDGNVPVLYADPSS 158

Query: 235 AHLEIARSL-----VDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLF 71
            H+EIA +L        PA G     A+D+L+HVYC+QF+  G     +VF     + +F
Sbjct: 159 KHVEIATALSELNNASQPALGIQ---ALDMLVHVYCTQFKNLGFGYAVEVFEHFTDQGVF 215

Query: 70  PSRKTCNFLLNSLVKAGEFQR 8
           PS KTCNFLL++LVKA E ++
Sbjct: 216 PSLKTCNFLLSALVKANELEK 236


>ref|XP_010922654.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Elaeis guineensis]
           gi|743788403|ref|XP_010922655.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Elaeis guineensis]
           gi|743788407|ref|XP_010922656.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Elaeis guineensis]
           gi|743788411|ref|XP_010922657.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Elaeis guineensis]
          Length = 845

 Score =  140 bits (353), Expect = 5e-31
 Identities = 81/207 (39%), Positives = 116/207 (56%), Gaps = 15/207 (7%)
 Frame = -3

Query: 592 SQSQPSNHDP-----------NQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRL 446
           S + P  H P           + I LL++ L L+LS+PSL+    +ETLA LSP   DRL
Sbjct: 25  SSAAPGPHHPPPPPGAAASADDDIPLLRRNLALLLSRPSLDATLCRETLARLSPGRLDRL 84

Query: 445 LFEIQPSINPKTALHFFTLASDASHFNFTLRSYAILIRLLLRS----XXXXXXXXXXXXX 278
           L +++P+I P+ AL FF+ ASD   F FT RSY++L+  LLRS                 
Sbjct: 85  LLDLRPAIKPRPALRFFSFASDRCGFRFTPRSYSLLVHALLRSNHVAAARLLLIRLIGGG 144

Query: 277 XXLKLPVLFENPAAAHLEIARSLVDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVF 98
               LP+L ++P+    EI R++ D+ ++    S A+D L+HV C+QFRF G +L    F
Sbjct: 145 TGSNLPLLLDDPSHRFAEIVRAVADTVSADEPPSGALDTLVHVCCTQFRFDGPKLAVVAF 204

Query: 97  RAMAGECLFPSRKTCNFLLNSLVKAGE 17
           + +    L PS KTCNFLL+SL +A +
Sbjct: 205 KILVDRGLCPSLKTCNFLLSSLARASD 231


>ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prunus persica]
           gi|462413303|gb|EMJ18352.1| hypothetical protein
           PRUPE_ppa001463mg [Prunus persica]
          Length = 821

 Score =  139 bits (349), Expect = 2e-30
 Identities = 82/190 (43%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
 Frame = -3

Query: 565 PNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTALHFFTLA 386
           PNQ   L   ++ ILSKPSL+  K K  + LLS   FDR+   I  ++NPKTALHFF  A
Sbjct: 49  PNQS--LHNWVSSILSKPSLDSSKCKALIPLLSSHEFDRVFCSISSNVNPKTALHFFYFA 106

Query: 385 SDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAAAHLEIARSLV 206
           S++  F FT+RS+ +L+RLL+ S                 +PVL+ N    H+EIA +++
Sbjct: 107 SESFKFQFTVRSFCVLVRLLILSNLVSPARLLLIRLIDGNVPVLYANHNQRHMEIAIAML 166

Query: 205 DSPASGYSTSA----AIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKTCNFLLN 38
           D   +  ST      A+DLLIHVYC+QF+  G     D F   + + +FPS KTCNFLL+
Sbjct: 167 D--LNTVSTQGLGVQALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLKTCNFLLS 224

Query: 37  SLVKAGEFQR 8
           SLVKA E  +
Sbjct: 225 SLVKANELHK 234


>ref|XP_009342743.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Pyrus x
           bretschneideri]
          Length = 835

 Score =  138 bits (348), Expect = 2e-30
 Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 2/193 (1%)
 Frame = -3

Query: 580 PSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTALH 401
           P   +P     L   ++ ILSKPSL+  K K  + LLSP  FD+L   I  ++NPKTALH
Sbjct: 48  PDQPEPTD-QTLHNWVSSILSKPSLDSSKCKALVPLLSPLQFDQLFCSISSNVNPKTALH 106

Query: 400 FFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAAAHLEI 221
           FF  AS++  F FT+RS+ +L+RLL+ S                 +P  + NP+  H+EI
Sbjct: 107 FFYFASESFKFRFTVRSFCVLVRLLIGSNLVAPARLLLIRSIDGNVPASYANPSHRHMEI 166

Query: 220 ARSL--VDSPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKTCNF 47
           A ++  +++ A       A+DLLIHVYC+QF+  G     DVF   + + +FPS KTCNF
Sbjct: 167 AIAMLALNTVAERGVGVQALDLLIHVYCTQFKNMGFGYAVDVFMFFSDKGVFPSLKTCNF 226

Query: 46  LLNSLVKAGEFQR 8
           LL+SLVKA +  +
Sbjct: 227 LLSSLVKASKLHK 239


>ref|XP_008227937.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Prunus mume]
          Length = 834

 Score =  138 bits (348), Expect = 2e-30
 Identities = 82/190 (43%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
 Frame = -3

Query: 565 PNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTALHFFTLA 386
           PNQ   L   ++ ILSKPSL+  K K  + LLS   FDR+   I  ++NPKTALHFF  A
Sbjct: 53  PNQS--LHNWVSSILSKPSLDSSKCKALIPLLSSQEFDRVFCSISSNVNPKTALHFFYFA 110

Query: 385 SDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAAAHLEIARSLV 206
           S++  F FT RS+ +L+RLL+ S                 +PVL+ N    H+EIA +++
Sbjct: 111 SESFKFQFTARSFCVLVRLLILSNLVSPARLLLIRLIDGNVPVLYANHNQRHMEIAIAML 170

Query: 205 DSPASGYSTSA----AIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKTCNFLLN 38
           D   +  ST      A+DLLIHVYC+QF+  G     D F   + + +FPS KTCNFLL+
Sbjct: 171 D--LNTVSTQGLGVQALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLKTCNFLLS 228

Query: 37  SLVKAGEFQR 8
           SLVKA E  +
Sbjct: 229 SLVKANELHK 238


>ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590680604|ref|XP_007040907.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590680608|ref|XP_007040908.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590680612|ref|XP_007040909.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590680616|ref|XP_007040910.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|590680620|ref|XP_007040911.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778151|gb|EOY25407.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778152|gb|EOY25408.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778153|gb|EOY25409.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778154|gb|EOY25410.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508778155|gb|EOY25411.1| Tetratricopeptide
           repeat-like superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508778156|gb|EOY25412.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 845

 Score =  138 bits (348), Expect = 2e-30
 Identities = 86/196 (43%), Positives = 113/196 (57%), Gaps = 3/196 (1%)
 Frame = -3

Query: 586 SQPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTA 407
           S  SN++ NQ  LL + L+ ILSK SL+  K K+ L LLSP  FDR    I   +NPKT 
Sbjct: 56  SNDSNNNNNQ-GLLGR-LSCILSKSSLDSSKCKQLLPLLSPLDFDRFFSAISSHLNPKTT 113

Query: 406 LHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLF-ENPAAAH 230
           LHFF LAS + +F FTLRSY ILI LLL +                KLP+    N    H
Sbjct: 114 LHFFYLASQSFNFRFTLRSYCILILLLLLANHSSPARLLFIRLIDGKLPLSSPNNTTIDH 173

Query: 229 LEIARSLVD--SPASGYSTSAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
           ++I  +L D  + + G      +D+L+H+YC+QF+  G     DVF  +A + +FPS KT
Sbjct: 174 IQITTALADLNTLSKGVPRVMGVDMLLHLYCTQFKNAGFTSAIDVFFTLADKGMFPSSKT 233

Query: 55  CNFLLNSLVKAGEFQR 8
           CNF L+SLVKA E Q+
Sbjct: 234 CNFFLSSLVKANELQK 249


>ref|XP_010677535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Beta vulgaris subsp. vulgaris]
           gi|731333068|ref|XP_010677536.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Beta vulgaris subsp. vulgaris]
           gi|870860167|gb|KMT11530.1| hypothetical protein
           BVRB_5g108490 [Beta vulgaris subsp. vulgaris]
          Length = 829

 Score =  137 bits (346), Expect = 3e-30
 Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
 Frame = -3

Query: 547 LKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTALHFFTLASDASHF 368
           L K ++ +LS PSL+  K K+ L LLSP  FDR+  E+   +NP T L FF    ++  +
Sbjct: 51  LLKWVSSVLSNPSLDSSKCKDILTLLSPSQFDRVFSEVNSLVNPNTVLRFFYFGIESCGY 110

Query: 367 NFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAA-AHLEIARSLVDSPAS 191
           +F+++SY  LIRLL+ S                K+P  F+      H EIA +LVD    
Sbjct: 111 SFSVKSYCALIRLLVGSDFSESARLLLIRLIDGKVPTFFDKECRDRHFEIANALVDLNVG 170

Query: 190 GYST--SAAIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKTCNFLLNSLVKAGE 17
              +  +   D+L+HVYC+Q +  G  L FDVF+ MAG   FPS +TCNFL++SLVKAGE
Sbjct: 171 LEKSIGNRTFDMLVHVYCTQIKNAGYGLAFDVFKVMAGRGAFPSLRTCNFLMSSLVKAGE 230

Query: 16  FQR 8
            QR
Sbjct: 231 LQR 233


>ref|XP_009338802.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Pyrus x bretschneideri]
           gi|694421948|ref|XP_009338803.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Pyrus x bretschneideri]
           gi|694421950|ref|XP_009338804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Pyrus x bretschneideri]
          Length = 835

 Score =  137 bits (346), Expect = 3e-30
 Identities = 75/175 (42%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
 Frame = -3

Query: 526 ILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTALHFFTLASDASHFNFTLRSY 347
           +LSKPSL+  K K  + LLSP  FD+L   I  ++NPKTALHFF  AS++  F FT+RS 
Sbjct: 65  VLSKPSLDSSKCKALVPLLSPLQFDQLFRSISSNVNPKTALHFFYFASESFKFRFTVRSL 124

Query: 346 AILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENPAAAHLEIARSLVD--SPASGYSTSA 173
            +L+RLL+ S                 +PV + NP+  H+EIA ++++  + A       
Sbjct: 125 CVLVRLLINSNLVSPARLLLIRSIDGNVPVSYANPSHRHMEIAIAMLELNTVAERAVGVQ 184

Query: 172 AIDLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKTCNFLLNSLVKAGEFQR 8
           A+DLLIHVYC+QF+  G     D+F   + +  FPS K CNFLL+SLVKA E  +
Sbjct: 185 ALDLLIHVYCTQFKSMGFGYAVDMFMCFSDKGFFPSLKICNFLLSSLVKASELHK 239


>ref|XP_012083902.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Jatropha curcas]
          Length = 834

 Score =  137 bits (344), Expect = 6e-30
 Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
 Frame = -3

Query: 583 QPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTAL 404
           QP   + +    L   +  +LS       K ++ L  L+P  FD+   +I+P++NP+T L
Sbjct: 43  QPQTREKSSNKSLTNLVFALLSNRRFKYSKCEKLLQHLTPQEFDQCFLDIRPNVNPQTTL 102

Query: 403 HFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENP-AAAHL 227
            FF  AS   +F FT+RSY +LIRLL+ S                KLPVL+ N     H+
Sbjct: 103 KFFQFASSTRNFRFTVRSYCLLIRLLVSSDILSAARLLLIRLIDGKLPVLYANEFERRHI 162

Query: 226 EIARSLVDSPASGYSTSAAI---DLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
           EIA ++VD   SG+     +   DL+IH+YC+QF+  G ++ FDVF  +AG+ L PS KT
Sbjct: 163 EIAMTIVDLH-SGFGPVVVVKLADLIIHIYCTQFKHLGFDVAFDVFSLLAGKGLLPSMKT 221

Query: 55  CNFLLNSLVKAGEFQR 8
           C FLL+SLVK  E ++
Sbjct: 222 CTFLLSSLVKGNELKK 237


>gb|KDP28071.1| hypothetical protein JCGZ_19479 [Jatropha curcas]
          Length = 838

 Score =  137 bits (344), Expect = 6e-30
 Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
 Frame = -3

Query: 583 QPSNHDPNQINLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLFEIQPSINPKTAL 404
           QP   + +    L   +  +LS       K ++ L  L+P  FD+   +I+P++NP+T L
Sbjct: 47  QPQTREKSSNKSLTNLVFALLSNRRFKYSKCEKLLQHLTPQEFDQCFLDIRPNVNPQTTL 106

Query: 403 HFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLPVLFENP-AAAHL 227
            FF  AS   +F FT+RSY +LIRLL+ S                KLPVL+ N     H+
Sbjct: 107 KFFQFASSTRNFRFTVRSYCLLIRLLVSSDILSAARLLLIRLIDGKLPVLYANEFERRHI 166

Query: 226 EIARSLVDSPASGYSTSAAI---DLLIHVYCSQFRFRGLELGFDVFRAMAGECLFPSRKT 56
           EIA ++VD   SG+     +   DL+IH+YC+QF+  G ++ FDVF  +AG+ L PS KT
Sbjct: 167 EIAMTIVDLH-SGFGPVVVVKLADLIIHIYCTQFKHLGFDVAFDVFSLLAGKGLLPSMKT 225

Query: 55  CNFLLNSLVKAGEFQR 8
           C FLL+SLVK  E ++
Sbjct: 226 CTFLLSSLVKGNELKK 241


>ref|XP_009604540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190943|ref|XP_009604541.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190945|ref|XP_009604542.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190947|ref|XP_009604544.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190949|ref|XP_009604545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190951|ref|XP_009604546.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190953|ref|XP_009604547.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190955|ref|XP_009604548.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
           gi|697190957|ref|XP_009604549.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 839

 Score =  134 bits (337), Expect = 4e-29
 Identities = 81/203 (39%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
 Frame = -3

Query: 607 HQKAQSQSQPSNHDPNQ----INLLKKALTLILSKPSLNIPKSKETLALLSPDLFDRLLF 440
           HQ    Q  PS+    Q    +NL +K +T +LS P ++  K K+ L  L+P  FD +  
Sbjct: 39  HQTPSKQPNPSSESKQQKVFDLNL-RKWVTSVLSNPHVDSLKIKDLLTHLTPQQFDAIFL 97

Query: 439 EIQPSINPKTALHFFTLASDASHFNFTLRSYAILIRLLLRSXXXXXXXXXXXXXXXLKLP 260
           EI  S+ P  AL FF LAS +  F+F+++SY  L RLL+ S                KLP
Sbjct: 98  EIHSSLKPLNALKFFHLASGSYGFSFSVQSYCTLFRLLVASNHDDAARLLLIRLIDGKLP 157

Query: 259 VLFENPAAAHLEIARSLVD-SPASGYSTSA-AIDLLIHVYCSQFRFRGLELGFDVFRAMA 86
            LF+ P   H+E+A SL + S  S +  +    DLL+H+ C+QF+  G +   DVFR++A
Sbjct: 158 ALFDCPQQKHVEVAVSLAELSRLSDFGVAVRTFDLLVHLCCTQFKNVGFDAALDVFRSLA 217

Query: 85  GECLFPSRKTCNFLLNSLVKAGE 17
              L+PS KTCNFLL+SLVK  E
Sbjct: 218 SRGLYPSLKTCNFLLSSLVKENE 240