BLASTX nr result

ID: Cinnamomum25_contig00019135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00019135
         (658 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEH10976.1| DNA binding/ligand-dependent nuclear receptor [Hi...    64   9e-08

>gb|EEH10976.1| DNA binding/ligand-dependent nuclear receptor [Histoplasma
           capsulatum G186AR]
          Length = 590

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 6/210 (2%)
 Frame = -2

Query: 642 PPRSMLQEPCATFFRSDALGLPPVSSEET--DHLGRRLPSYYGSGPSGYLISEETVQSSW 469
           PP S  Q+P  ++ +      PP  S++    +  +  PSY    PS Y  S+E   S  
Sbjct: 347 PPPSYSQQPPPSYSQQP----PPSYSQQPPPSYSNKPTPSYSQQPPSSY--SQEPTPSYS 400

Query: 468 PGPPGSALRKPSATFSRRDALDLPP--VSSEETDRFGRQLPSFYGSDYLISEATVQSAWP 295
             PP S  ++P+ ++S++     PP   S E T  + +Q PS Y      S+    S   
Sbjct: 401 QQPPSSYSQEPTPSYSQQ-----PPSSYSQEPTPSYSQQPPSSY------SQEPTPSYSQ 449

Query: 294 GPPGSMLREPCATFSRRDSLDRPP--VSSEETDHFGRQLPSYYGSDNDYLISGEPVQSAW 121
            PP S  +EP  ++S++     PP   S E T  + +Q PS Y          EP  S  
Sbjct: 450 QPPSSYSQEPTPSYSQQ-----PPSSYSQEPTPSYSQQPPSSYPQ--------EPTPSYS 496

Query: 120 PGPPGSMPREPCASFSRSDALDLPPINSEE 31
             PP S P+EP  S+ +      PP  S+E
Sbjct: 497 QQPPSSYPQEPTPSYPQQ-----PPSYSQE 521



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 4/202 (1%)
 Frame = -2

Query: 642 PPRSMLQEPCATFFRSDALGLPPVSSEETDHLGRRLPSYYGSGPSGYLISEETVQSSWPG 463
           PP S  Q+P  ++ +      PP  S++        PSY    P  Y  S +   S    
Sbjct: 339 PPPSYSQQPPPSYSQQP----PPSYSQQPP------PSYSQQPPPSY--SNKPTPSYSQQ 386

Query: 462 PPGSALRKPSATFSRRDALDLPP--VSSEETDRFGRQLPSFYGSDYLISEATVQSAWPGP 289
           PP S  ++P+ ++S++     PP   S E T  + +Q PS Y      S+    S    P
Sbjct: 387 PPSSYSQEPTPSYSQQ-----PPSSYSQEPTPSYSQQPPSSY------SQEPTPSYSQQP 435

Query: 288 PGSMLREPCATFSRRDSLDRPP--VSSEETDHFGRQLPSYYGSDNDYLISGEPVQSAWPG 115
           P S  +EP  ++S++     PP   S E T  + +Q PS Y        S EP  S    
Sbjct: 436 PSSYSQEPTPSYSQQ-----PPSSYSQEPTPSYSQQPPSSY--------SQEPTPSYSQQ 482

Query: 114 PPGSMPREPCASFSRSDALDLP 49
           PP S P+EP  S+S+      P
Sbjct: 483 PPSSYPQEPTPSYSQQPPSSYP 504


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