BLASTX nr result

ID: Cinnamomum25_contig00018871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00018871
         (260 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006576371.1| PREDICTED: putative ribonuclease H protein A...    59   2e-06

>ref|XP_006576371.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max] gi|571443975|ref|XP_006576373.1| PREDICTED:
           putative ribonuclease H protein At1g65750-like isoform
           X1 [Glycine max] gi|571443977|ref|XP_006576374.1|
           PREDICTED: putative ribonuclease H protein
           At1g65750-like isoform X2 [Glycine max]
           gi|571443979|ref|XP_006576375.1| PREDICTED: putative
           ribonuclease H protein At1g65750-like isoform X3
           [Glycine max] gi|571443981|ref|XP_006576376.1|
           PREDICTED: putative ribonuclease H protein
           At1g65750-like isoform X4 [Glycine max]
           gi|571443986|ref|XP_006576378.1| PREDICTED: putative
           ribonuclease H protein At1g65750-like isoform X1
           [Glycine max] gi|571443988|ref|XP_006576379.1|
           PREDICTED: putative ribonuclease H protein
           At1g65750-like isoform X2 [Glycine max]
           gi|571443990|ref|XP_006576380.1| PREDICTED: putative
           ribonuclease H protein At1g65750-like isoform X3
           [Glycine max] gi|571443992|ref|XP_006576381.1|
           PREDICTED: putative ribonuclease H protein
           At1g65750-like isoform X4 [Glycine max]
          Length = 223

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   KLNFDGSFVRYLRKGEIGRVIRDWNGKMVMSFSRP-IDSSDANETELFAILIGCRELLQM 182
           KLN DG+F  Y  KG  G V+RDW G+ ++ FS   I+ S A E EL+AI IG + ++  
Sbjct: 70  KLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALEAELWAIKIGMQTVVAR 129

Query: 183 VGYGAILEEDSFSVIQ 230
                I+E DS   IQ
Sbjct: 130 GYRNLIVESDSLKAIQ 145


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