BLASTX nr result

ID: Cinnamomum25_contig00018187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00018187
         (222 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241042.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
ref|XP_006377270.1| hypothetical protein POPTR_0011s03510g [Popu...    57   5e-06

>ref|XP_010241042.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Nelumbo nucifera]
          Length = 380

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 34/66 (51%), Positives = 43/66 (65%)
 Frame = -1

Query: 222 CAVKKGDLAFAVKLCKVSINGKWSIDVSFLQGVVDALVKESRKEEAQKLVDFAASKTSRY 43
           C  +K D   A KLCK S+N +  +D   LQ VVD LVKES+ E+A+KLV+   SK+   
Sbjct: 315 CLCEKEDFGLAFKLCKESLN-RCRVDAGLLQVVVDGLVKESKVEDAKKLVELGRSKSYSR 373

Query: 42  SSLKMP 25
           SSLKMP
Sbjct: 374 SSLKMP 379


>ref|XP_006377270.1| hypothetical protein POPTR_0011s03510g [Populus trichocarpa]
           gi|550327503|gb|ERP55067.1| hypothetical protein
           POPTR_0011s03510g [Populus trichocarpa]
          Length = 295

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 219 AVKKGDLAFAVKLCKVSINGKWSIDVSFLQGVVDALVKESRKEEAQKLVDFAASKTSRYS 40
           +V+KGDLAFA KLC   I+ K  +  + +Q VVDAL KESR  EA++LV    S  +   
Sbjct: 225 SVEKGDLAFAFKLCMDLIHSKLVVQEALIQSVVDALAKESRIAEAKELVGHGESGRAHSY 284

Query: 39  SLKMP 25
            LK+P
Sbjct: 285 KLKLP 289


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