BLASTX nr result
ID: Cinnamomum25_contig00017533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00017533
(608 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago t... 191 3e-46
ref|XP_003599441.1| RNA polymerase sigma factor [Medicago trunca... 189 9e-46
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca... 189 9e-46
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,... 188 2e-45
gb|KDO83322.1| hypothetical protein CISIN_1g046578mg [Citrus sin... 188 2e-45
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 188 2e-45
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 187 3e-45
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 187 3e-45
gb|AES69680.2| RNA polymerase sigma factor [Medicago truncatula] 186 6e-45
ref|XP_008806591.1| PREDICTED: RNA polymerase sigma factor sigD,... 184 4e-44
ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD,... 181 3e-43
ref|XP_010922212.1| PREDICTED: RNA polymerase sigma factor sigD,... 180 5e-43
ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus nota... 177 3e-42
ref|XP_012065613.1| PREDICTED: RNA polymerase sigma factor sigD,... 176 6e-42
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 176 8e-42
ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,... 176 1e-41
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 175 2e-41
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 175 2e-41
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,... 174 2e-41
gb|AKC88711.1| sigma factor, partial [Melianthus villosus] 173 5e-41
>ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
Length = 185
Score = 191 bits (484), Expect = 3e-46
Identities = 100/161 (62%), Positives = 127/161 (78%)
Frame = -3
Query: 525 VQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPM 346
V G G VA+IAEANN LRR L R PTY+EIAE ++ VS+V+LV +R+R PISLD+ +
Sbjct: 25 VYGEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSI 84
Query: 345 SNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVR 166
++Q ++ LKEIIPGP E +PE +V RQ MKQ + +LL TLD+REE I+RLYFGLNGET
Sbjct: 85 TDQSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPL 144
Query: 165 SCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
S EEIG+L+ LSRER+RQI IALSKL++ +IVDSLK YV+
Sbjct: 145 SFEEIGKLLKLSRERIRQIHGIALSKLRQNTIVDSLKFYVV 185
>ref|XP_003599441.1| RNA polymerase sigma factor [Medicago truncatula]
Length = 267
Score = 189 bits (480), Expect = 9e-46
Identities = 98/159 (61%), Positives = 126/159 (79%)
Frame = -3
Query: 519 GSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSN 340
G G VA+IAEANN LRR L R PTY+EIAE ++ VS+V+LV +R+R PISLD+ +++
Sbjct: 109 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 168
Query: 339 QGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVRSC 160
Q ++ LKEIIPGP E +PE +V RQ MKQ + +LL TLD+REE I+RLYFGLNGET S
Sbjct: 169 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 228
Query: 159 EEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
EEIG+L+ LSRER+RQI IALSKL++ ++VDSLK YV+
Sbjct: 229 EEIGKLLKLSRERIRQIHGIALSKLEQNTLVDSLKFYVV 267
>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 403
Score = 189 bits (480), Expect = 9e-46
Identities = 98/159 (61%), Positives = 126/159 (79%)
Frame = -3
Query: 519 GSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSN 340
G G VA+IAEANN LRR L R PTY+EIAE ++ VS+V+LV +R+R PISLD+ +++
Sbjct: 245 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 304
Query: 339 QGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVRSC 160
Q ++ LKEIIPGP E +PE +V RQ MKQ + +LL TLD+REE I+RLYFGLNGET S
Sbjct: 305 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 364
Query: 159 EEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
EEIG+L+ LSRER+RQI IALSKL++ ++VDSLK YV+
Sbjct: 365 EEIGKLLKLSRERIRQIHGIALSKLEQNTLVDSLKFYVV 403
>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
vinifera]
Length = 442
Score = 188 bits (478), Expect = 2e-45
Identities = 99/168 (58%), Positives = 128/168 (76%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + + GS+ VA+IAEA L R L R PTYDEIAE D+ VS+VRLV +R+R P
Sbjct: 275 NKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTP 334
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
IS+DQ +++QG +TL+EIIPGP+ET P+ +V RQ MKQ+++R L TL +RE +ILRLYFG
Sbjct: 335 ISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFG 394
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
+NGET S EEIGRL+ LSRERVRQI IALSKL++ S+VD LK Y++
Sbjct: 395 INGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 442
>gb|KDO83322.1| hypothetical protein CISIN_1g046578mg [Citrus sinensis]
Length = 379
Score = 188 bits (478), Expect = 2e-45
Identities = 96/168 (57%), Positives = 131/168 (77%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + GSM G VA+IAEANN L R L R PT EIAE ++ VS+VRL +RTRHP
Sbjct: 212 NKSRTIRLPGSMAGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSTVRLAIERTRHP 271
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
ISLD ++++G +T+++IIPGP+ETMPE +V +Q MKQ+L LL+TL +RE ILRL+FG
Sbjct: 272 ISLDGAVTDRGCMTMQDIIPGPDETMPERMVQKQLMKQELKELLQTLSEREADILRLHFG 331
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
L+G+T SC+EIGRL++LSRER+RQIR IAL+KLQ+ +I+++LK Y++
Sbjct: 332 LDGQTPVSCKEIGRLLSLSRERIRQIRGIALTKLQQTNILNNLKVYMV 379
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 188 bits (478), Expect = 2e-45
Identities = 99/168 (58%), Positives = 128/168 (76%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + + GS+ VA+IAEA L R L R PTYDEIAE D+ VS+VRLV +R+R P
Sbjct: 152 NKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTP 211
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
IS+DQ +++QG +TL+EIIPGP+ET P+ +V RQ MKQ+++R L TL +RE +ILRLYFG
Sbjct: 212 ISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFG 271
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
+NGET S EEIGRL+ LSRERVRQI IALSKL++ S+VD LK Y++
Sbjct: 272 INGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 319
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 187 bits (476), Expect = 3e-45
Identities = 98/168 (58%), Positives = 129/168 (76%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + GSM G VA+IAEANN L R L R PT +EIAE ++ VS+VRL +RTRHP
Sbjct: 269 NKSRTIRLPGSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHP 328
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
ISLD +++ G +TL++IIPGP+ETMPE +V +Q MKQ+L LL+TL +RE ILRL+FG
Sbjct: 329 ISLDGAITDTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFG 388
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
L+G+T SC+EIGRL+ LSRERVRQIR IAL+KLQ+ +I ++LK Y++
Sbjct: 389 LDGQTPVSCKEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 187 bits (475), Expect = 3e-45
Identities = 98/168 (58%), Positives = 128/168 (76%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + GSM G VA+IAEANN L R L R PT EIAE ++ VS+VRL +RTRHP
Sbjct: 269 NKSRTIRLPGSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHP 328
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
ISLD +++ G +TL++IIPGP+ETMPE +V +Q MKQ+L LL+TL +RE ILRL+FG
Sbjct: 329 ISLDGAITDTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFG 388
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
L+G+T SC+EIGRL+ LSRERVRQIR IAL+KLQ+ +I ++LK Y++
Sbjct: 389 LDGQTPVSCKEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436
>gb|AES69680.2| RNA polymerase sigma factor [Medicago truncatula]
Length = 154
Score = 186 bits (473), Expect = 6e-45
Identities = 97/153 (63%), Positives = 124/153 (81%)
Frame = -3
Query: 501 VARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSNQGSITL 322
VA+IAEANN LRR L R PTY+EIAE ++ VS+V+LV +R+R PISLD+ +++Q ++ L
Sbjct: 2 VAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITDQSNLIL 61
Query: 321 KEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVRSCEEIGRL 142
KEIIPGP E +PE +V RQ MKQ + +LL TLD+REE I+RLYFGLNGET S EEIG+L
Sbjct: 62 KEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSFEEIGKL 121
Query: 141 INLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
+ LSRER+RQI IALSKL++ +IVDSLK YV+
Sbjct: 122 LKLSRERIRQIHGIALSKLRQNTIVDSLKFYVV 154
>ref|XP_008806591.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Phoenix
dactylifera]
Length = 449
Score = 184 bits (466), Expect = 4e-44
Identities = 91/168 (54%), Positives = 133/168 (79%), Gaps = 1/168 (0%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + + G++ ++ +I E+ + LRR+LGR PTYDEIA+ A +GVSSVR++ +R+RHP
Sbjct: 282 NKSRMVRMPGNLCEAMNKIMESKSLLRRQLGRNPTYDEIADFAGIGVSSVRIISERSRHP 341
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
IS+DQP++ QG +TLK+IIPGP+E PE IV RQ+M Q++ +LLK L+ RE++I+RL++G
Sbjct: 342 ISVDQPVNKQG-LTLKDIIPGPDEIRPEVIVNRQEMLQNMGKLLKILNGREQYIIRLHYG 400
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKL-QKMSIVDSLKAYV 46
LNGET RSC+EIGRL+NLSRER+RQI C AL +L ++ S+++ L+ V
Sbjct: 401 LNGETARSCDEIGRLLNLSRERIRQIHCSALRRLREERSLIECLRQSV 448
>ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Populus euphratica]
Length = 423
Score = 181 bits (458), Expect = 3e-43
Identities = 94/154 (61%), Positives = 122/154 (79%), Gaps = 1/154 (0%)
Frame = -3
Query: 501 VARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSNQGSITL 322
VA+IA ANN L +L R P+YDEIAE ++ VS+VRL +R R PISLDQ + Q S+TL
Sbjct: 270 VAKIAGANNDLSNKLRRSPSYDEIAEVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLTL 329
Query: 321 KEIIPGPEETMPESIVTRQQMKQDLDRLLKT-LDQREEHILRLYFGLNGETVRSCEEIGR 145
+EIIPGP+ET+PE++V R+ +KQ+L++L +T L +RE HILRL+FGLNG+T +SCEEIGR
Sbjct: 330 QEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGR 389
Query: 144 LINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
L+ LSRERVRQI C ALSKL+ IV+ LKAY +
Sbjct: 390 LVKLSRERVRQIICTALSKLRHKRIVEPLKAYAV 423
>ref|XP_010922212.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Elaeis
guineensis]
Length = 455
Score = 180 bits (456), Expect = 5e-43
Identities = 87/168 (51%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + + G++ + +I ++N+ LR++LGR PTYDEIA+ +G SSVR++ +R+RHP
Sbjct: 288 NKSRMVRLPGNLCEAANKIMKSNSLLRKQLGRNPTYDEIADFTGIGASSVRIISERSRHP 347
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
IS+DQP++ QG +TLK+IIPGP+E PE +V RQ+M Q++++LLKTL RE++I+ L++G
Sbjct: 348 ISVDQPVNKQG-LTLKDIIPGPDEIRPEVLVNRQEMLQNMEKLLKTLSGREQYIITLHYG 406
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKL-QKMSIVDSLKAYV 46
LNGET RSC+EIGRL+NLSRER+RQI C AL +L ++ S+++ L+ V
Sbjct: 407 LNGETARSCDEIGRLLNLSRERIRQIHCSALRRLREEKSLIECLRQSV 454
>ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587907279|gb|EXB95293.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 422
Score = 177 bits (450), Expect = 3e-42
Identities = 92/165 (55%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N V + G+M G VA++ EANN L + L R+PTYDEIA+ + VS+VRLV +R R P
Sbjct: 252 NKSRVVRLPGNMCGIVAKVTEANNVLNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPP 311
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKT-LDQREEHILRLYF 190
ISLD+ ++ +G +TL+EIIPGPEE PE +V +Q MKQ++++LLKT L RE ++LRL+F
Sbjct: 312 ISLDRAITERGCMTLQEIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHF 371
Query: 189 GLNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLK 55
GL+G+ SCEEIGRL+ LSRER+RQI IALSKLQ+ +IV+ L+
Sbjct: 372 GLSGDIPLSCEEIGRLLKLSRERIRQINGIALSKLQQTNIVNDLR 416
>ref|XP_012065613.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Jatropha curcas] gi|643737466|gb|KDP43578.1|
hypothetical protein JCGZ_16865 [Jatropha curcas]
Length = 429
Score = 176 bits (447), Expect = 6e-42
Identities = 88/168 (52%), Positives = 126/168 (75%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + + G MR +IAEA +L + LGR P+YDEIA+A +L +S+VR+ + R P
Sbjct: 262 NKSRIVRLPGGMREKKKKIAEARIALEKRLGRLPSYDEIAQALNLHISTVRIGFESNRFP 321
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
+SLD+ MS+QG +TL+EI+PGP+E MPE +V RQ +KQ+LD+LL+TL +RE ++LRL FG
Sbjct: 322 VSLDRAMSDQGGMTLQEILPGPDEMMPEYMVKRQLLKQELDKLLQTLSEREAYVLRLTFG 381
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
LNG+T +S EEIG + L RERVRQI IALSKL++ SI+++L+ Y++
Sbjct: 382 LNGQTPQSFEEIGGSLKLCRERVRQINSIALSKLRERSILENLEVYIV 429
>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
gi|462415663|gb|EMJ20400.1| hypothetical protein
PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 176 bits (446), Expect = 8e-42
Identities = 90/168 (53%), Positives = 127/168 (75%)
Frame = -3
Query: 546 NACLVCHVQGSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHP 367
N + + G + G +A+I +A NSL + R P++DEIAE + S+V+LV +R+R P
Sbjct: 273 NKSRIIRLPGHVCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPP 332
Query: 366 ISLDQPMSNQGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFG 187
ISLD+ + +GS+TL+EII GPEE MPE ++ RQ MKQ++++LLKTL RE ++LRL+FG
Sbjct: 333 ISLDRVATVRGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFG 392
Query: 186 LNGETVRSCEEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
LNGE+ +S EEIGRL+ LSRERVRQI IALSKL++ SI+D+LK Y++
Sbjct: 393 LNGESPQSFEEIGRLLKLSRERVRQINGIALSKLRQTSILDNLKLYIV 440
>ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cicer
arietinum]
Length = 407
Score = 176 bits (445), Expect = 1e-41
Identities = 92/159 (57%), Positives = 120/159 (75%)
Frame = -3
Query: 519 GSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSN 340
G G V +IAEA N L + L R PTY+E+AE ++ VS V+LV +R+R PISLD+ + +
Sbjct: 249 GEKYGMVGKIAEAKNVLSKRLRRKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKAVFD 308
Query: 339 QGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVRSC 160
QG++TLKEI+PGP E +PE +V RQ KQ + +LL TL++RE ILRLYFGLNGET S
Sbjct: 309 QGNLTLKEIMPGPVEMIPEKMVERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETPLSF 368
Query: 159 EEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
EEIG+ + LSRER+RQI IALSKLQ+ ++VDSLK YV+
Sbjct: 369 EEIGKQLKLSRERIRQIHGIALSKLQQTTLVDSLKFYVV 407
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 175 bits (443), Expect = 2e-41
Identities = 92/154 (59%), Positives = 121/154 (78%), Gaps = 1/154 (0%)
Frame = -3
Query: 501 VARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSNQGSITL 322
VA+IA ANN L +L R P+YDEIA+ ++ VS+VRL +R R PISLDQ + Q S+TL
Sbjct: 270 VAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLTL 329
Query: 321 KEIIPGPEETMPESIVTRQQMKQDLDRLLKT-LDQREEHILRLYFGLNGETVRSCEEIGR 145
+EIIPGP+ET+PE++V R+ +KQ+L++L +T L +RE HILRL+FGLNG+T +SCEEIGR
Sbjct: 330 QEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGR 389
Query: 144 LINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
L+ LSRERVRQI ALSKL+ IV+ LKAY +
Sbjct: 390 LVKLSRERVRQIIGTALSKLRHKEIVEPLKAYAV 423
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 175 bits (443), Expect = 2e-41
Identities = 92/154 (59%), Positives = 121/154 (78%), Gaps = 1/154 (0%)
Frame = -3
Query: 501 VARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSNQGSITL 322
VA+IA ANN L +L R P+YDEIA+ ++ VS+VRL +R R PISLDQ + Q S+TL
Sbjct: 266 VAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLTL 325
Query: 321 KEIIPGPEETMPESIVTRQQMKQDLDRLLKT-LDQREEHILRLYFGLNGETVRSCEEIGR 145
+EIIPGP+ET+PE++V R+ +KQ+L++L +T L +RE HILRL+FGLNG+T +SCEEIGR
Sbjct: 326 QEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIGR 385
Query: 144 LINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
L+ LSRERVRQI ALSKL+ IV+ LKAY +
Sbjct: 386 LVKLSRERVRQIIGTALSKLRHKEIVEPLKAYAV 419
>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
nucifera]
Length = 455
Score = 174 bits (442), Expect = 2e-41
Identities = 92/159 (57%), Positives = 121/159 (76%)
Frame = -3
Query: 519 GSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSN 340
GS+ +A+IAEAN L LGR PTYDEIA+ + VS+V L+ +R+R P+S+D+ S+
Sbjct: 297 GSVSEMMAKIAEANTVLSTRLGRVPTYDEIADMLGICVSTVSLLCERSRPPMSVDRTYSD 356
Query: 339 QGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVRSC 160
G + L+EII GPEET PE++V RQ MKQ+++RLLK L +RE +ILRLYFGLNGET S
Sbjct: 357 HGCMKLQEIISGPEETTPETMVNRQLMKQEVERLLKILGEREANILRLYFGLNGETPCSF 416
Query: 159 EEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
EEIGRL+NLSRERVRQI IAL+KLQ+ + +D L+ Y +
Sbjct: 417 EEIGRLLNLSRERVRQIYYIALAKLQQSNTIDDLRLYFL 455
>gb|AKC88711.1| sigma factor, partial [Melianthus villosus]
Length = 425
Score = 173 bits (439), Expect = 5e-41
Identities = 89/159 (55%), Positives = 119/159 (74%)
Frame = -3
Query: 519 GSMRGSVARIAEANNSLRRELGRWPTYDEIAEAADLGVSSVRLVRDRTRHPISLDQPMSN 340
GS +A++AEANN L R L R+PT+DE AE +L VS+VRLV +R+R PISLDQ +S+
Sbjct: 267 GSKWEVMAKMAEANNVLSRRLRRFPTHDETAEFLNLHVSTVRLVSERSRPPISLDQVVSD 326
Query: 339 QGSITLKEIIPGPEETMPESIVTRQQMKQDLDRLLKTLDQREEHILRLYFGLNGETVRSC 160
G + LK+I+PGP+E+ PE VTR+ MKQ+++ LL TL +RE ILRL+FGL+G+ SC
Sbjct: 327 HGHLKLKDIMPGPDESNPEKTVTRKHMKQEVENLLNTLSERESCILRLHFGLDGQAPLSC 386
Query: 159 EEIGRLINLSRERVRQIRCIALSKLQKMSIVDSLKAYVI 43
EE+GR + LSRERVRQI +AL KLQ +VD LK ++I
Sbjct: 387 EEVGRRVKLSRERVRQINGMALLKLQNKCVVDDLKVFII 425